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Evaluation of contrasting progenies transcriptome for the accumulation of biomass and identification of regulation networks

Grant number: 17/02270-6
Support type:Scholarships in Brazil - Post-Doctorate
Effective date (Start): April 01, 2017
Effective date (End): March 31, 2022
Field of knowledge:Biological Sciences - Biochemistry - Molecular Biology
Principal researcher:Glaucia Mendes Souza
Grantee:Augusto Lima Diniz
Home Institution: Instituto de Química (IQ). Universidade de São Paulo (USP). São Paulo , SP, Brazil
Associated research grant:14/50921-8 - Signaling and regulatory network studies associated to the energy cane, AP.BIOEN.TEM
Associated scholarship(s):19/15852-9 - The transcriptional landscape and co-expression networks of sugarcane, BE.EP.PD

Abstract

The development of the cellulosic ethanol technology, in which the bagasse is used to produce ethanol, has generated interest in the development of the energy cane, which has more fiber and biomass. The development of the energy cane will favor the production of cellulosic ethanol and its biomass can also be used in thermochemical and biorefineries with the integrated production of multiple products including biofuels, bioelectricity, chemical compounds, biogas and heat. For each sugarcane variety released, lower yield gains have been observed, which may be caused by the narrow genetic base of commercial varieties (Dal-Bianco, Carneiro et al., 2012). The analysis of crosses with ancestral genotypes has addressed the need to increase the genetic base used in the development of modern commercial hybrids. In this project, we will analyze the physiology and biochemistry of progenies from crosses between commercial and ancestral varieties and select genotypes with characteristics desirable to the energy cane for the study of the transcriptome. For the development of the energy cane, it is necessary to modify the characteristics of sugarcane by changing the partition of carbon from sugar to biomass. This strategy involves the knowledge of the regulatory networks of secondary cell wall metabolism, the main component of plant biomass. (AU)

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Scientific publications
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
DINIZ, AUGUSTO LIMA; RODRIGUES DA SILVA, DANIELLE IZILDA; LEMBKE, CAROLINA GIMILIANI; LAMAS COSTA, MAXIMILLER DAL-BIANCO; TEN-CATEN, FELIPE; LI, FORREST; VILELA, ROMEL DUARTE; MENOSSI, MARCELO; WARE, DOREEN; ENDRES, LAURICIO; SOUZA, GLAUCIA MENDES. Amino Acid and Carbohydrate Metabolism Are Coordinated to Maintain Energetic Balance during Drought in Sugarcane. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, v. 21, n. 23 DEC 2020. Web of Science Citations: 0.
SOUZA, GLAUCIA MENDES; VAN SLUYS, MARIE-ANNE; LEMBKE, CAROLINA GIMILIANI; LEE, HAYAN; MARGARIDO, GABRIEL RODRIGUES ALVES; HOTTA, CARLOS TAKESHI; GAIARSA, JONAS WEISSMANN; DINIZ, AUGUSTO LIMA; OLIVEIRA, MAURO DE MEDEIROS; FERREIRA, SAVIO DE SIQUEIRA; NISHIYAMA, MILTON YUTAKA; TEN-CATEN, FELIPE; RAGAGNIN, GEOVANI TOLFO; ANDRADE, PABLO DE MORAIS; DE SOUZA, ROBSON FRANCISCO; NICASTRO, GIANLUCCA GONCALVES; PANDYA, RAVI; KIM, CHANGSOO; GUO, HUI; DURHAM, ALAN MITCHELL; CARNEIRO, MONALISA SAMPAIO; ZHANG, JISEN; ZHANG, XINGTAN; ZHANG, QING; MING, RAY; SCHATZ, MICHAEL C.; DAVIDSON, BOB; PATERSON, ANDREW H.; HECKERMAN, DAVID. Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop. GIGASCIENCE, v. 8, n. 12 DEC 2019. Web of Science Citations: 3.
DINIZ, AUGUSTO L.; FERREIRA, SAVIO S.; TEN-CATEN, FELIPE; MARGARIDO, GABRIEL R. A.; DOS SANTOS, JOAO M.; BARBOSA, GERALDO V. DE S.; CARNEIRO, MONALISA S.; SOUZA, GLAUCIA M. Genomic resources for energy cane breeding in the post genomics era. COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, v. 17, p. 1404-1414, 2019. Web of Science Citations: 0.

Please report errors in scientific publications list by writing to: cdi@fapesp.br.