Marco Antonio Seiki Kadowaki
CV Lattes
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Universidade de São Paulo (USP). Instituto de Física de São Carlos (IFSC) (Institutional affiliation for the last research proposal) Birthplace: Brazil
bachelor's at Ciências Biológicas from Universidade Federal do Paraná (2006), master's at Biochemistry from Universidade Federal do Paraná (2008) and doctorate at Biochemistry from Universidade Federal do Paraná (2012). Has experience in Biochemistry, focusing on Molecular Biology (Source: Lattes Curriculum)
- Two important classes of glycosyl hydrolases: functional studies and structural analysis, BP.PD
Abstract
The ethanol production from vegetal biomass degradation is an alternative to fossil fuels and a good way to reach the energy independence. This cellulose rich material is a renewable and unexhausted source whose degradation products (sugars) can be useful in ethanol production (second generation ethanol) generated by fermentative processes. However the recalcitrance of crystalline cellu...
- Construction and optimization of a fungal secretion system suitable for high-yield biomass hydrolytic and oxidation enzyme production for structural and functional studies, BE.EP.PD
Abstract
Biomass is a universally abundant, renewable resource useful for the production of biofuels, pharmaceuticals and starting biochemicals that can be converted into plastics and other commercial composites if polymerized sugars may perhaps be extracted. Enzymatic degradation of biomass polymers into fermentable sugars is a recalcitrant process for which a complete efficient breakdown mecha...
| 1 / 1 | Completed scholarships in Brazil |
| 1 / 1 | Completed scholarships abroad |
| 2 / 2 | All Scholarships |
| Associated processes | |
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
| Publications | 17 |
| Citations | 57 |
| Cit./Article | 3.4 |
| Data from Web of Science | |
DE ARAUJO, EVANDRO ARES; TOMAZINI, JR., ATILIO; SEIKI KADOWAKI, MARCO ANTONIO; MURAKAMI, MARIO TYAGO; POLIKARPOV, IGOR. Crystallization and preliminary X-ray diffraction analysis of a new xyloglucanase from Xanthomonas campestris pv. campestris. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, v. 69, n. 6, p. 676-678, JUN 2013. Web of Science Citations: 0. (10/52362-5, 07/08706-9, 08/56255-9, 09/05349-6)
KADOWAKI, MARCO A. S.; HIGASI, PAULA; DE GODOY, MARIANA O.; PRADE, ROLF A.; POLIKARPOV, IGOR. Biochemical and structural insights into a thermostable cellobiohydrolase from Myceliophthora thermophila. FEBS Journal, v. 285, n. 3, p. 559-579, FEB 2018. Web of Science Citations: 1. (15/13684-0, 11/20505-4, 09/52840-7)
GODOY, ANDRE S.; PEREIRA, CAROLINE S.; RAMIA, MARINA PAGLIONE; SILVEIRA, RODRIGO L.; CAMILO, CESAR M.; KADOWAKI, MARCO A.; LANGE, LENE; BUSK, PETER K.; NASCIMENTO, ALESSANDRO S.; SKAF, MUNIR S.; et al. Structure, computational and biochemical analysis of PcCel45A endoglucanase from Phanerochaete chrysosporium and catalytic mechanisms of GH45 subfamily C members. SCIENTIFIC REPORTS, v. 8, FEB 27 2018. Web of Science Citations: 3. (15/13684-0, 11/21608-1, 10/52362-5, 11/20505-4)
EVANGELISTA, DANILO ELTON; DE ARAUJO, EVANDRO A.; OLIVEIRA NETO, MARIO; SEIKI KADOWAKI, MARCO ANTONIO; POLIKARPOV, IGOR. Biochemical characterization and low-resolution SAXS structure of an exopolygalacturonase from Bacillus licheniformis. NEW BIOTECHNOLOGY, v. 40, n. B, p. 268-274, JAN 25 2017. Web of Science Citations: 3. (15/13684-0, 11/20505-4)
SEIKI KADOWAKI, MARCO ANTONIO; CAMILO, CESAR MOISES; MUNIZ, AMANDA BERNARDES; POLIKARPOV, IGOR. Functional Characterization and Low-Resolution Structure of an Endoglucanase Cel45A from the Filamentous Fungus Neurospora crassa OR74A: Thermostable Enzyme with High Activity Toward Lichenan and beta-Glucan. MOLECULAR BIOTECHNOLOGY, v. 57, n. 6, p. 574-588, JUN 2015. Web of Science Citations: 8. (11/20505-4, 08/56255-9, 10/08680-2, 09/54035-4, 09/11536-3)
LIMA, MARISA A.; OLIVEIRA-NETO, MARIO; KADOWAKI, MARCO ANTONIO S.; ROSSETO, FLAVIO R.; PRATES, ERICA T.; SQUINA, FABIO M.; LEME, ADRIANA F. P.; SKAF, MUNIR S.; POLIKARPOV, IGOR. Aspergillus niger beta-Glucosidase Has a Cellulase-like Tadpole Molecular Shape INSIGHTS INTO GLYCOSIDE HYDROLASE FAMILY 3 (GH3) beta-GLUCOSIDASE STRUCTURE AND FUNCTION. Journal of Biological Chemistry, v. 288, n. 46, p. 32991-33005, NOV 15 2013. Web of Science Citations: 28. (08/56255-9, 09/54035-4, 10/16542-9)
GODOY, ANDRE SCHUTZER; CAMILO, CESAR MOISES; KADOWAKI, MARCO ANTONIO; MUNIZ, HELOISA DOS S.; SANTO, MELISSA ESPIRITO; MURAKAMI, MARIO TYAGO; NASCIMENTO, ALESSANDRO S.; POLIKARPOV, IGOR. Crystal structure of beta 1 -> 6-galactosidase from Bifidobacterium bifidum S17: trimeric architecture, molecular determinants of the enzymatic activity and its inhibition by alpha-galactose. FEBS Journal, v. 283, n. 22, p. 4097-4112, NOV 2016. Web of Science Citations: 5. (11/20505-4, 09/05328-9, 08/56255-9, 14/06565-2, 09/52840-7, 11/05712-3)
GODOY, ANDRE S.; DE LIMA, MARIANA Z. T.; CAMILO, CESAR M.; POLIKARPOV, IGOR. Crystal structure of a putative exo-beta-1,3-galactanase from Bifidobacterium bifidum S17. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, v. 72, n. 4, p. 288-293, APR 2016. Web of Science Citations: 1. (11/05712-3, 08/56255-9, 11/20505-4, 09/52840-7, 09/05328-9)
EVANGELISTA, DANILO ELTON; SEIKI KADOWAKI, MARCO ANTONIO; MELLO, BRUNO LUAN; POLIKARPOV, IGOR. Biochemical and biophysical characterization of novel GH10 xylanase prospected from a sugar cane bagasse compost-derived microbial consortia. International Journal of Biological Macromolecules, v. 109, p. 560-568, APR 2018. Web of Science Citations: 4. (15/13684-0, 11/20505-4, 10/52362-5, 11/21608-1)
DE ARAUJO, EVANDRO ARES; MANZINE, LIVIA REGINA; PIIADOV, VASSILI; SEIKI KADOWAKI, MARCO ANTONIO; POLIKARPOV, IGOR. Biochemical characterization, low-resolution SAXS structure and an enzymatic cleavage pattern of BlCel48 from Bacillus licheniformis. International Journal of Biological Macromolecules, v. 111, p. 302-310, MAY 2018. Web of Science Citations: 1. (15/13684-0, 10/52362-5, 11/20505-4, 14/00769-5)
KADOWAKI, MARCO A. S.; VARNAI, ANIKO; JAMESON, JOHN-KRISTIAN; LEITE, ANA E. T.; COSTA-FILHO, ANTONIO J.; KUMAGAI, PATRICIA S.; PRADE, ROLF A.; POLIKARPOV, IGOR; EIJSINK, VINCENT G. H.. Functional characterization of a lytic polysaccharide monooxygenase from the thermophilic fungus Myceliophthora thermophila. PLoS One, v. 13, n. 8, AUG 20 2018. Web of Science Citations: 3. (15/13684-0, 11/20505-4)
NAKAMURA, ALINE M.; SEIKI KADOWAKI, MARCO ANTONIO; GODOY, ANDRE; NASCIMENTO, ALESSANDRO S.; POLIKARPOV, IGOR. Low-resolution envelope, biophysical analysis and biochemical characterization of a short-chain specific and halotolerant carboxylesterase from Bacillus licheniformis. International Journal of Biological Macromolecules, v. 120, n. B, p. 1893-1905, DEC 2018. Web of Science Citations: 0. (11/20505-4)
SEIKI KADOWAKI, MARCO ANTONIO; DE GODOY, MARIANA ORTIZ; KUMAGAI, PATRICIA SUEMY; DA COSTA-FILHO, ANTONIO JOSE; MORT, ANDREW; PRADE, ROLF ALEXANDER; POLIKARPOV, IGOR. Characterization of a New Glyoxal Oxidase from the Thermophilic Fungus Myceliophthora thermophila M77: Hydrogen Peroxide Production Retained in 5-Hydroxymethylfurfural Oxidation. CATALYSTS, v. 8, n. 10, OCT 2018. Web of Science Citations: 0. (15/13684-0, 11/20505-4)
SONODA, MILTON T.; GODOY, ANDRE S.; PELLEGRINI, VANESSA O. A.; KADOWAKI, MARCO A. S.; NASCIMENTO, ALESSANDRO S.; POLIKARPOV, IGOR. Structure and dynamics of Trichoderma harzianum Cel7B suggest molecular architecture adaptations required for a wide spectrum of activities on plant cell wall polysaccharides. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, v. 1863, n. 6, p. 1015-1026, JUN 2019. Web of Science Citations: 0. (15/13684-0, 14/06565-2, 17/18173-0)
EVANGELISTA, DANILO ELTON; ARNOLDI PELLEGRIN, VANESSA DE OLIVEIRA; SANTO, MELISSA ESPIRITO; MCQUEEN-MASON, SIMON; BRUCE, NEIL C.; POLIKARPOV, IGOR. Biochemical characterization and low-resolution SAXS shape of a novel GH11 exo-1,4-beta-xylanase identified in a microbial consortium. Applied Microbiology and Biotechnology, v. 103, n. 19, p. 8035-8049, OCT 2019. Web of Science Citations: 0. (15/13684-0, 11/21608-1, 10/52362-5, 11/20505-4)
SEIKI KADOWAKI, MARCO ANTONIO; POLIKARPOV, IGOR. Structural insights into the hydrolysis pattern and molecular dynamics simulations of GH45 subfamily a endoglucanase from Neurospora crassa OR74A. Biochimie, v. 165, p. 275-284, OCT 2019. Web of Science Citations: 0. (15/13684-0, 18/11730-3)
PUHL, ANA C.; PRATES, ERICA T.; ROSSETO, FLAVIO R.; MANZINE, LIVIA R.; STANKOVIC, IVANA; DE ARAUJO, SIMARA S.; ALVAREZ, THABATA M.; SQUINA, FABIO M.; SKAF, MUNIR S.; POLIKARPOV, IGOR. Crystallographic structure and molecular dynamics simulations of the major endoglucanase from Xanthomonas campestris pv. campestris shed light on its oligosaccharide products release pattern. International Journal of Biological Macromolecules, v. 136, p. 493-502, SEP 1 2019. Web of Science Citations: 0. (11/20505-4, 15/13684-0, 09/52840-7, 10/52362-5, 11/21608-1, 15/50590-4)