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Ricardo Zorzetto Nicoliello Vêncio

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Universidade de São Paulo (USP). Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto (FFCLRP)  (Institutional affiliation for the last research proposal)
Birthplace: Brazil

BSc. in Physics, MSc. in Statistics, PhD. in Bioinformatics and Dr Hab. in Probability & Statistics by the University of São Paulo (USP), I have been working on the creation of mathematical and computational methods for the solution of problems in Biology and Medicine. In late 2008 I joined the University of São Paulo's Medical School at Ribeirão Preto (FMRP-USP) as Assistant Professor to conduct research and teaching activities on bioinformatics at the Genetics Department. At that moment I founded the LabPIB (acronym that stands for Biological Information Processing Lab, in Portuguese http://labpib.openwetware.org). In late 2010 I was invited to join the newly created Department of Computing and Mathematics (DCM) at University of Sao Paulo's Ribeirao Preto campus, to where I moved the LabPIB. In early 2013 I became Associate Professor in the same department. Questions or reprint requisitions of my published works (http://scholar.google.com/citations?user=4N0TeRkAAAAJ) or even random comments are always welcome: rvencio@usp.br (Source: Lattes Curriculum)

Research grants
Scholarships in Brazil
Scholarships abroad
FAPESP support in numbers * Updated January 18, 2020
Total / Available in English
Most frequent collaborators in research granted by FAPESP
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Use this Research Supported by FAPESP (BV/FAPESP) channel only to send messages referring to FAPESP-funded scientific projects.


 

 

 

 

Keywords used by the researcher
Scientific publications resulting from Research Grants and Scholarships under the grantee's responsibility (11)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

Publications9
Citations242
Cit./Article26.9
Data from Web of Science

SILVA, RICARDO R.; JOURDAN, FABIEN; SALVANHA, DIEGO M.; LETISSE, FABIEN; JAMIN, EMILIEN L.; GUIDETTI-GONZALEZ, SIMONE; LABATE, CARLOS A.; VENCIO, RICARDO Z. N.. ProbMetab: an R package for Bayesian probabilistic annotation of LC-MS-based metabolomics. Bioinformatics, v. 30, n. 9, p. 1336-1337, . Web of Science Citations: 28. (09/53161-6)

ERNST, MADELEINE; SILVA, DENISE BRENTAN; SILVA, RICARDO ROBERTO; VENCIO, RICARDO Z. N.; LOPES, NORBERTO PEPORINE. Mass spectrometry in plant metabolomics strategies: from analytical platforms to data acquisition and processing. NATURAL PRODUCT REPORTS, v. 31, n. 6, p. 784-806, . Web of Science Citations: 77. (11/05215-0, 10/14926-4, 09/54098-6, 12/18031-7)

ERNST, MADELEINE; SILVA, DENISE B.; SILVA, RICARDO; MONGE, MARCELO; SEMIR, JOAO; VENCIO, RICARDO Z. N.; LOPES, NORBERTO P.. A metabolomic protocol for plant systematics by matrix-assisted laser-desorption/ionization time-of flight mass spectrometry. Analytica Chimica Acta, v. 859, p. 46-58, . Web of Science Citations: 5. (11/05215-0, 10/14926-4, 09/54098-6, 12/18031-7)

ALMEIDA-E-SILVA, DANILLO C.; VENCIO, RICARDO Z. N.. SIFTER-T: A scalable and optimized framework for the SIFTER phylogenomic method of probabilistic protein domain annotation. BIOTECHNIQUES, v. 58, n. 3, p. 140-142, . Web of Science Citations: 1. (09/53161-6)

VÊNCIO‚ R.Z.N.; BRENTANI‚ H.; PEREIRA‚ C.A.B.. Using credibility intervals instead of hypothesis tests in SAGE analysis. Bioinformatics, v. 19, n. 18, p. 2461-2464, .

KHAN, ATLAS; XUE, LI ZHENG; WEI, WU; QU, YANPENG; HUSSAIN, AMIR; VENCIO, RICARDO Z. N.. Convergence Analysis of a New Self Organizing Map Based Optimization (SOMO) Algorithm. COGNITIVE COMPUTATION, v. 7, n. 4, p. 477-486, . Web of Science Citations: 2. (12/23329-5)

JIANG, YUXIANG; ORON, TAL RONNEN; CLARK, WYATT T.; BANKAPUR, ASMA R.; D'ANDREA, DANIEL; LEPORE, ROSALBA; FUNK, CHRISTOPHER S.; KAHANDA, INDIKA; VERSPOOR, KARIN M.; BEN-HUR, ASA; et al. An expanded evaluation of protein function prediction methods shows an improvement in accuracy. Genome Biology, v. 17, . Web of Science Citations: 96. (09/53161-6)

BORGES, GISELY T.; VENCIO, ENEIDA F.; QUEK, SUE-ING; CHEN, ADELINE; SALVANHA, DIEGO M.; VENCIO, RICARDO Z. N.; NGUYEN, HOLLY M.; VESSELLA, ROBERT L.; CAVANAUGH, CHRISTOPHER; WARE, CAROL B.; et al. Conversion of Prostate Adenocarcinoma to Small Cell Carcinoma-Like by Reprogramming. Journal of Cellular Physiology, v. 231, n. 9, p. 2040-2047, . Web of Science Citations: 4. (11/08104-4)

BROOKS, AARON N.; REISS, DAVID J.; ALLARD, ANTOINE; WU, WEI-JU; SALVANHA, DIEGO M.; PLAISIER, CHRISTOPHER L.; CHANDRASEKARAN, SRIRAM; PAN, MIN; KAUR, AMARDEEP; BALIGA, NITIN S.. A system-level model for the microbial regulatory genome. MOLECULAR SYSTEMS BIOLOGY, v. 10, n. 7, . Web of Science Citations: 29. (12/05392-1, 11/08104-4)

KHAN, ATLAS; QU, YAN-PENG; LI, ZHENG-XUE. Convergence Analysis of a New MaxMin-SOMO Algorithm. INTERNATIONAL JOURNAL OF AUTOMATION AND COMPUTING, v. 16, n. 4, p. 534-542, . Web of Science Citations: 0. (12/23329-5)

ALMEIDA-E-SILVA, DANILLO C.; VENCIO, RICARDO Z. N.. SIFTER-T: A scalable and optimized framework for the SIFTER phylogenomic method of probabilistic protein domain annotation. BIOTECHNIQUES, v. 58, n. 3, p. 140-142, . Web of Science Citations: 1. (09/53161-6)

Academic Publications

(References retrieved automatically from State of São Paulo Research Institutions)

SILVA, Ricardo Roberto da. Anotação probabilística de perfis de metabólitos obtidos por cromatografia líquida acoplada a espectrometria de massas. 2014. Tese (Doutorado) – Faculdade de Medicina de Ribeirão Preto. Universidade de São Paulo (USP). Ribeirão Preto.

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