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Tsai Siu Mui

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Universidade de São Paulo (USP). Centro de Energia Nuclear na Agricultura (CENA)  (Institutional affiliation for the last research proposal)
Birthplace: China

Full professor (2006), graduated as Agricultural Engineering from Universidade de São Paulo (1971), M.Sc. (1974) and Ph.D. (1978) in Agronomy from Universidade de São Paulo. Her work focuses mainly on molecular microbial ecology and plant-microbial interactions, with the following topics: bioindicators for monitoring microbial communities under land use changes, next generation sequencing, climate changes and greenhouse gas exchanges under tropical environments. Recipient of the prizes Medal for Scientific and Technological Merit (2000), Scopus 2008 and the Agribusiness Prize 2015. Elected as member of the Brazilian Academy of Sciences in 2008. (Source: Lattes Curriculum)

News published in Agência FAPESP Newsletter about the researcher
Deforestation in the Amazon favors an increase in the diversity of antibiotic-resistant soil bacteria  
Scientists set out to understand how regenerated Atlantic rainforest areas help protect biodiversity 
Biotechnology could make agriculture climate-resilient 
In order to face challenges in the future, scientists are investigating the Earth’s past 
Biofuels could be facilitators of food security, say researchers 
Articles published in Pesquisa FAPESP Magazine about the researcher:
Microbial alliances 
Microbial alliances 
Alianzas con los microbios 
Articles published in other media outlets (77 total):
More itemsLess items
Noticias de la Tierra (Alemanha): La deforestación de la Amazonia favorece la proliferación de bacterias resistentes a los antibióticos (30/Mar/2021)
Mundo Agropecuario (Venezuela): La deforestación favorece el aumento de la diversidad de bacterias del suelo resistentes a los antibióticos (19/Mar/2021)
Hora Punta (Espanha): ¿Qué tiene que ver la deforestación de la Amazonia con la proliferación de bacterias resistentes a los antibióticos? (15/Mar/2021)
Tecno Punta (Espanha): La resistencia a los antibióticos constituye un problema de salud pública global (15/Mar/2021)
El Faro (Espanha): La deforestación de la Amazonia favorece la proliferación de bacterias resistentes a los antibióticos (15/Mar/2021)
Secretos de Salud (Espanha): La deforestación de la Amazonia y la resistencia a los antibióticos (15/Mar/2021)
Meio Ambiente: Desmatamento amazônico aumenta bactérias resistentes a antibióticos (13/Mar/2021)
Phys.Org (Reino Unido): Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (12/Mar/2021)
News Medical (Austrália): Deforestation in the Amazon increases diversity of antibiotic-resistant bacteria (12/Mar/2021)
Eurasia Review (Espanha): Deforestation Favors Increase In Diversity Of Antibiotic-Resistant Soil Bacteria (12/Mar/2021)
Scientific Inquirer (EUA): Amazon deforestation is causing an increase in antibiotic resistant bacteria (12/Mar/2021)
Globe Health News: Deforestation in the Amazon increases diversity of antibiotic-resistant bacteria (12/Mar/2021)
Wixroom: Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (12/Mar/2021)
Enzyme Time: Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (12/Mar/2021)
Microbioz India (Índia) online: Deforestation in the Amazon builds variety of antibiotic-resistant bacteria (12/Mar/2021)
Posibl: Deforestation in the Amazon Favors an increas in the Diversity of antibiotic-resistant Soil Bacteria (12/Mar/2021)
NewsInfoseries (Índia): Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (12/Mar/2021)
Environmental News Network (EUA): Deforestation in the Amazon Favors an increas in the Diversity of antibiotic-resistant Soil Bacteria (11/Mar/2021)
Bioengineer (Reino Unido): Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (11/Mar/2021)
Health Medicine Network (EUA): Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (11/Mar/2021)
Science Codex: Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (11/Mar/2021)
Scienmag Science Magazine (Reino Unido): Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (11/Mar/2021)
La Revue Gauche: Deforestation favors an increase in the diversity of antibiotic-resistant soil bacteria (11/Mar/2021)
Remade - Porto Nacional da Madeira: Desmatamento favorece surgimento de bactérias resistentes (05/Mar/2021)
Agrolink: Desmatamento favorece surgimento de bactérias resistentes (03/Mar/2021)
Blog do Geraldo José: Desmatamento favorece aumento de bactérias resistentes a antibióticos (25/Feb/2021)
LabNetwork: Desmatamento favorece aumento de bactérias resistentes a antibióticos (24/Feb/2021)
Instituto Humanitas Unisinos: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos (24/Feb/2021)
Dinâmicas Sul-Sur: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos (24/Feb/2021)
EcoDebate: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos (23/Feb/2021)
Portal Saneamento Básico: Desmatamento favorece aumento de bactérias resistentes a antibióticos (23/Feb/2021)
Tribuna União: Desmatamento favorece aumento de bactérias resistentes a antibióticos (22/Feb/2021)
Ecoamazônia: Desmatamento favorece aumento de bactérias resistentes a antibióticos (21/Feb/2021)
Jornal da USP online: Desmatamento favorece aumento de bactérias resistentes a antibióticos (19/Feb/2021)
Revista Ecológico online: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (18/Feb/2021)
Sou Ecológico: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (18/Feb/2021)
Florestal Brasil: Desmatamento na Amazônia causa aumento de bactérias resistentes a antibióticos (17/Feb/2021)
18 Horas: Estudos indicam aumento de bactérias resistentes a antibióticos após desmatamento na Amazônia (17/Feb/2021)
Dom Total: Desmatamento na Amazônia causa aumento de bactérias resistentes a antibióticos (16/Feb/2021)
Seesp - Sindicato dos Engenheiros no Estado de São Paulo: Desmatamento favorece aumento de bactérias resistentes a antibióticos no solo (16/Feb/2021)
Revista Analytica online: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (15/Feb/2021)
Saense: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (15/Feb/2021)
Leiamais.ba: Desmatamento da Amazônia eleva a resistência aos antibióticos (15/Feb/2021)
Repórter 10: Desmatamento favorece aumento de bactérias resistentes a antibióticos (15/Feb/2021)
Ambientalmente: Desmatamento favorece aumento de bactérias resistentes a antibióticos (15/Feb/2021)
F5 News: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos (14/Feb/2021)
Plantão News (MT): Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (13/Feb/2021)
Espaço Ecológico no Ar: Desmate na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (13/Feb/2021)
Noticias de Contagem online: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (13/Feb/2021)
Portal Neo Mondo: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (13/Feb/2021)
Mundo e Meio: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (13/Feb/2021)
Brasil Amazônia Agora: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (13/Feb/2021)
UOL: Amazônia: Desmatamento causa aumento de bactérias resistentes a antibiótico (12/Feb/2021)
BOL: Amazônia: Desmatamento causa aumento de bactérias resistentes a antibiótico (12/Feb/2021)
Meio Norte online (Piauí): Desmatamento favorece aumento de bactérias resistentes a antibióticos (12/Feb/2021)
Paranashop: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (12/Feb/2021)
Revista Amazônia: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (12/Feb/2021)
Revista Cultivar Máquinas online: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (12/Feb/2021)
Portal do Holanda: Desmatamento na Amazônia possibilita o aumento de bactérias (12/Feb/2021)
Casa de Notícias: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (12/Feb/2021)
Planeta online: Desmate na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo - Planeta (12/Feb/2021)
AlcidesFaria: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (12/Feb/2021)
O Guardião da Montanha: Meio ambiente: "Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo" (12/Feb/2021)
24 Brasil: Desmatamento causa aumento de bactérias resistentes a antibiótico (12/Feb/2021)
Press From Brasil (EUA): Desmate na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (12/Feb/2021)
Renato Cesar Pereira: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (12/Feb/2021)
Jornal Alerta: Desmatamento na Amazônia favorece aumento de bactérias resistentes a antibióticos no solo (12/Feb/2021)
Amazing Inventions (Índia): The Impact Of The Soil Microbiota On The Mitigation Of Greenhouse Gases In Tropical Forests (07/Dec/2019)
Revista Ecológico online: Para enfrentar desafios do futuro, cientistas investigame o passado da Terra (05/Dec/2019)
Sou Ecológico: Para enfrentar desafios do futuro, cientistas investigame o passado da Terra (05/Dec/2019)
O Povo: Passado da Terra é investigado para enfrentar desafios dofuturo (02/Dec/2019)
O Povo: Estudo do passado para enfrentar mudanças climáticas (02/Dec/2019)
Plurale online: Para enfrentar desafios do futuro, cientistas investigam o passado da Terra (28/Nov/2019)
Brasil CT&I: Para enfrentar desafios do futuro, cientistas investigam o passado da Terra (28/Nov/2019)
Phys.Org (Reino Unido): The impact of the soil microbiota on the mitigation of greenhouse gases in tropical forests (27/Nov/2019)
7thSpace: The impact of the soil microbiota on the mitigation of greenhouse gases in tropical forests (27/Nov/2019)
Scienmag Science Magazine (Reino Unido): The impact of the soil microbiota on the mitigation of greenhouse gases in tropical forests (26/Nov/2019)
Research grants
Scholarships in Brazil
Scholarships abroad
FAPESP support in numbers * Updated April 10, 2021
Total / Available in English
Most frequent collaborators in research granted by FAPESP
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Keywords used by the researcher
Scientific publications resulting from Research Grants and Scholarships under the grantee's responsibility (63)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

Publications53
Citations976
Cit./Article18.4
Data from Web of Science

MOITINHO, MARA REGINA; FERRAUDO, ANTONIO SERGIO; PANOSSO, ALAN RODRIGO; BICALHO, ELTON DA SILVA; TEIXEIRA, DANIEL DE BORTOLI; BARBOSA, MARCELO DE ANDRADE; TSAI, SIU MUI; FERRARI BORGES, BEATRIZ MARIA; CANNAVAN, FABIANA DE SOUZA; MARCONDES DE SOUZA, JACKSON ANTONIO; et al. Effects of burned and unburned sugarcane harvesting systems on soil CO2 emission and soil physical, chemical, and microbiological attributes. CATENA, v. 196, . Web of Science Citations: 0. (11/51749-6, 14/03634-3)

ETCHEGARAY‚ A.; SILVA-STENICO‚ M.E.; MOON‚ D.H.; TSAI‚ S.M.. In silico analysis of nonribosomal peptide synthetases of Xanthomonas axonopodis pv. citri: identification of putative siderophore and lipopeptide biosynthetic genes. MICROBIOLOGICAL RESEARCH, v. 159, n. 4, p. 425-437, .

TAKETANI, RODRIGO GOUVEA; YOSHIURA, CAIO AUGUSTO; FRANCO DIAS, ARMANDO CAVALCANTE; ANDREOTE, FERNANDO DINI; TSAI, SIU MUI. Diversity and identification of methanogenic archaea and sulphate-reducing bacteria in sediments from a pristine tropical mangrove. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, v. 97, n. 4, p. 401-411, . Web of Science Citations: 41. (06/06700-0)

TAKETANI, RODRIGO GOUVEA; TSAI, SIU MUI. The Influence of Different Land Uses on the Structure of Archaeal Communities in Amazonian Anthrosols Based on 16S rRNA and amoA Genes. MICROBIAL ECOLOGY, v. 59, n. 4, p. 734-743, . Web of Science Citations: 41. (06/06700-0)

RIBEIRO‚ M.P.M.A.; DELLIAS‚ M.T.F.; TSAI‚ S.M.; BOLMSTRÖN‚ A.; MEINHARDT‚ L.W.; BELLATO‚ C.M.. Utilization of the Etest assay for comparative antibiotic susceptibility profiles of citrus variegated chlorosis and Pierce’s disease strains of Xylella fastidiosa. Current Microbiology, v. 51, n. 4, p. 262-266, .

KROEGER, MARIE E.; MEREDITH, LAURA K.; MEYER, KYLE M.; WEBSTER, KEVIN D.; DE CAMARGO, PLINIO BARBOSA; DE SOUZA, LEANDRO FONSECA; TSAI, SIU MUI; VAN HAREN, JOOST; SALESKA, SCOTT; BOHANNAN, BRENDAN J. M.; et al. Rainforest-to-pasture conversion stimulates soil methanogenesis across the Brazilian Amazon. ISME Journal, v. 15, n. 3, p. 658-672, . Web of Science Citations: 1. (14/50320-4)

SOLTANGHEISI, AMIN; DE MORAES, MOACIR TUZZIN; CHERUBIN, MAURICIO ROBERTO; ALVAREZ, DASIEL OBREGON; DE SOUZA, LEANDRO FONSECA; BIELUCZYK, WANDERLEI; NAVROSKI, DEISI; BETTONI TELES, ANA PAULA; PAVINATO, PAULO SERGIO; MARTINELLI, LUIZ ANTONIO; et al. Forest conversion to pasture affects soil phosphorus dynamics and nutritional status in Brazilian Amazon. SOIL & TILLAGE RESEARCH, v. 194, . Web of Science Citations: 0. (17/18327-7, 16/24695-6, 17/11332-5, 14/50320-4)

RECCHIA, GUSTAVO H.; KONZEN, ENEAS R.; CASSIERI, FERNANDA; CALDAS, DANIELLE G. G.; TSAI, SIU M.. Arbuscular Mycorrhizal Symbiosis Leads to Differential Regulation of Drought-Responsive Genes in Tissue-Specific Root Cells of Common Bean. FRONTIERS IN MICROBIOLOGY, v. 9, . Web of Science Citations: 5. (11/12485-3)

KROEGER, MARIE E.; DELMONT, TOM O.; EREN, A. M.; MEYER, KYLE M.; GUO, JIARONG; KHAN, KIRAN; RODRIGUES, JORGE L. M.; BOHANNAN, BRENDAN J. M.; TRINGE, SUSANNAH G.; BORGES, CLOVIS D.; et al. New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes. FRONTIERS IN MICROBIOLOGY, v. 9, . Web of Science Citations: 4. (14/50320-4)

PYLRO, VICTOR SATLER; FRANCO DIAS, ARMANDO CAVALCANTE; ANDREOTE, FERNANDO DINI; MORAIS, DANIEL KUMAZAWA; VARANI, ALESSANDRO DE MELLO; FASANELLA ANDREOTE, CRISTIANE CIPOLLA; DE ALMEIDA BERNARDO, EDUARDO ROBERTO; ZUCCHI, TIAGO. Closed Genome Sequence of Phytopathogen Biocontrol Agent Bacillus velezensis Strain AGVL-005, Isolated from Soybean. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, v. 6, n. 7, . Web of Science Citations: 0. (14/50320-4, 16/02219-8)

LUCHETA, ADRIANO REIS; CANNAVAN, FABIANA DE SOUZA; WURDIG ROESCH, LUIZ FERNANDO; TSAI, SIU MUI; KURAMAE, EIKO EURYA. Fungal Community Assembly in the Amazonian Dark Earth. MICROBIAL ECOLOGY, v. 71, n. 4, p. 962-973, . Web of Science Citations: 7. (13/50365-5, 11/50914-3)

VAL-MORAES, SILVANA POMPEIA; DE MACEDO, HELENA SULEIMAN; KISHI, LUCIANO TAKESHI; PEREIRA, RODRIGO MATHEUS; NAVARRETE, ACACIO APARECIDO; MENDES, LUCAS WILLIAM; DE FIGUEIREDO, EDUARDO BARRETTO; LA SCALA, JR., NEWTON; TSAI, SIU MUI; DE MACEDO LEMOS, ELIANA GERTRUDES; et al. Liming in the sugarcane burnt system and the green harvest practice affect soil bacterial community in northeastern So Paulo, Brazil. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, v. 109, n. 12, p. 1643-1654, . Web of Science Citations: 3. (12/13321-7)

MOREIRA, MILENE; ZUCCHI, MARIA I.; GOMES, JOSE E.; TSAI, SIU M.; ALVES-PEREIRA, ALESSANDRO; CARDOSO, ELKE J. B. N.. Araucaria angustifolia Aboveground Roots Presented High Arbuscular Mycorrhizal Fungal Colonization and Diversity in the Brazilian Atlantic Forest. Pedosphere, v. 26, n. 4, p. 561-566, . Web of Science Citations: 3. (01/05146-6, 13/11137-7)

BRUNO TOMIO GOTO; MILENE MOREIRA; SIU MUI TSAI; ELKE JURANDIR BRAN NOGUEIRA CARDOSO; LEONOR COSTA MAIA. Notas sobre Acaulospora bireticulata Rothwell & Trappe e primeiro registro de Acaulospora koskei Blask. para o Brasil. Acta Botanica Brasilica, v. 22, n. 2, p. -, .

MORAIS, DANIEL K.; ROESCH, LUIZ F. W.; REDMILE-GORDON, MARC; SANTOS, FAUSTO G.; BALDRIAN, PETR; ANDREOTE, FERNANDO D.; PYLRO, VICTOR S.. BTW-Bioinformatics Through Windows: an easy-to-install package to analyze marker gene data. PeerJ, v. 6, . Web of Science Citations: 1. (14/50320-4, 16/02219-8)

ROSA PORTILHO, IRZO ISAAC; SAVIN, MARY CATHLEEN; BORGES, CLOVIS DANIEL; TSAI, SIU MUI; MERCANTE, FABIO MARTINS; ROSCOE, RENATO; DE CARVALHO, LAERCIO ALVES. Maintenance of N cycling gene communities with crop-livestock integration management in tropical agriculture systems. AGRICULTURE ECOSYSTEMS & ENVIRONMENT, v. 267, p. 52-62, . Web of Science Citations: 1. (14/50320-4, 15/21893-9)

MENDES, LUCAS WILLIAM; RAAIJMAKERS, JOS M.; DE HOLLANDER, MATTIAS; MENDES, RODRIGO; TSAI, SIU MUI. Influence of resistance breeding in common bean on rhizosphere microbiome composition and function. ISME Journal, v. 12, n. 1, p. 212-224, . Web of Science Citations: 34. (14/03217-3, 15/00251-9)

ANDREOTE, FERNANDO DINI; PEREIRA E SILVA, MICHELE DE CASSIA. Microbial communities associated with plants: learning from nature to apply it in agriculture. Current Opinion in Microbiology, v. 37, p. 29-34, . Web of Science Citations: 26. (13/50228-8, 14/50320-4, 13/50353-7)

GOSS-SOUZA, DENNIS; MENDES, LUCAS WILLIAM; BORGES, CLOVIS DANIEL; BARETTA, DILMAR; TSAI, SIU MUI; RODRIGUES, JORGE L. M.. Soil microbial community dynamics and assembly under long-term land use change. FEMS MICROBIOLOGY ECOLOGY, v. 93, n. 10, . Web of Science Citations: 12. (08/58114-3, 14/50320-4)

NAVARRETE, ACACIO A.; MELLIS, ESTEVAO V.; ESCALAS, ARTHUR; LEMOS, LEANDRO N.; LAVRES JUNIOR, JOSE; QUAGGIO, JOSE ANTONIO; ZHOU, JIZHONG; TSAI, SIU M.. Zinc concentration affects the functional groups of microbial communities in sugarcane-cultivated soil. AGRICULTURE ECOSYSTEMS & ENVIRONMENT, v. 236, p. 187-197, . Web of Science Citations: 5. (15/09436-1, 12/13321-7, 11/51749-6)

NAVARRETE, ACACIO A.; MELLIS, ESTEVAO V.; ESCALAS, ARTHUR; LEMOS, LEANDRO N.; LAVRES JUNIOR, JOSE; QUAGGIO, JOSE ANTONIO; ZHOU, JIZHONG; TSAI, SIU M.. Zinc concentration affects the functional groups of microbial communities in sugarcane-cultivated soil. AGRICULTURE ECOSYSTEMS & ENVIRONMENT, v. 236, p. 187-197, . Web of Science Citations: 5. (12/13321-7, 15/09436-1, 11/51749-6)

LEMOS, LEANDRO NASCIMENTO; DE SOUZA, ROSINEIDE CARDOSO; CANNAVAN, FABIANA DE SOUZA; PATRICIO, ANDRE; PYLRO, VICTOR SATLER; HANADA, ROGERIO EIJI; MUI, TSAI SIU. Metagenome sequencing of the microbial community of two Brazilian anthropogenic Amazon dark earth sites, Brazil. GENOMICS DATA, v. 10, p. 167-168, . Web of Science Citations: 0. (13/02760-2, 14/50320-4, 16/18215-1, 11/50914-3, 16/02219-8)

MILENE MOREIRA; DILMAR BARETTA; SIU MUI TSAI; SANDRA MARIA GOMES-DA-COSTA; ELKE JURANDY BRAN NOGUEIRA CARDOSO. Biodiversity and distribution of arbuscular mycorrhizal fungi in Araucaria angustifolia forest. Scientia Agricola, v. 64, n. 4, p. 393-399, . (01/05146-6)

NAVARRETE, ACACIO APARECIDO; DINIZ, TATIANA ROSA; PEREZ BRAGA, LUCAS PALMA; SILVA, GENIVALDO GUEIROS ZACARIAS; FRANCHINI, JULIO CEZAR; ROSSETTO, RAFFAELLA; EDWARDS, ROBERT ALAN; TSAI, SIU MUI. Multi-Analytical Approach Reveals Potential Microbial Indicators in Soil for Sugarcane Model Systems. PLoS One, v. 10, n. 6, . Web of Science Citations: 21. (12/13321-7, 14/06077-8, 11/51749-6)

SCHULZ, KRISTIN; HUNGER, SINDY; BROWN, GEORGE G.; TSAI, SIU M.; CERRI, CARLOS C.; CONRAD, RALF; DRAKE, HAROLD L.. Methanogenic food web in the gut contents of methane-emitting earthworm Eudrilus eugeniae from Brazil. ISME Journal, v. 9, n. 8, p. 1778-1792, . Web of Science Citations: 14. (08/58114-3, 11/50914-3)

MENDES, LUCAS W.; PEREZ BRAGA, LUCAS PALMA; NAVARRETE, ACACIO A.; DE SOUZA, DENNIS GOSS; SILVA, GENIVALDO G. Z.; TSAI, SIU M.. Using. Metagenomics to Connect Microbial Community Biodiversity and Functions. CURRENT ISSUES IN MOLECULAR BIOLOGY, v. 24, p. 103-118, . Web of Science Citations: 0. (15/00251-9, 13/22845-2, 12/13321-7, 10/20353-7, 11/51749-6, 14/03217-3, 14/06077-8)

NAVARRETE, ACACIO A.; VENTURINI, ANDRESSA M.; MEYER, KYLE M.; KLEIN, ANN M.; TIEDJE, JAMES M.; BOHANNAN, BRENDAN J. M.; NUESSLEIN, KLAUS; TSAI, SIU M.; RODRIGUES, JORGE L. M.. Differential Response of Acidobacteria Subgroups to Forest-to-Pasture Conversion and Their Biogeographic Patterns in the Western Brazilian Amazon. FRONTIERS IN MICROBIOLOGY, v. 6, . Web of Science Citations: 16. (12/13321-7, 08/58114-3, 14/50320-4)

LUCHETA, ADRIANO REIS; CANNAVAN, FABIANA DE SOUZA; WURDIG ROESCH, LUIZ FERNANDO; TSAI, SIU MUI; KURAMAE, EIKO EURYA. Fungal Community Assembly in the Amazonian Dark Earth. MICROBIAL ECOLOGY, v. 71, n. 4, p. 962-973, . Web of Science Citations: 7. (11/50914-3, 13/50365-5)

NAVARRETE, ACACIO APARECIDO; SOARES, TIELLE; ROSSETTO, RAFFAELLA; VAN VEEN, JOHANNES ANTONIE; TSAI, SIU MUI; KURAMAE, EIKO EURYA. Verrucomicrobial community structure and abundance as indicators for changes in chemical factors linked to soil fertility. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, v. 108, n. 3, p. 741-752, . Web of Science Citations: 12. (12/13321-7, 11/51749-6)

ETCHEGARAY‚ A.; SILVA-STENICO‚ M.E.; MOON‚ D.H.; TSAI‚ S.M.. In silico analysis of nonribosomal peptide synthetases of Xanthomonas axonopodis pv. citri: identification of putative siderophore and lipopeptide biosynthetic genes. MICROBIOLOGICAL RESEARCH, v. 159, n. 4, p. 425-437, .

DE LIMA BROSSI, MARIA JULIA; MENDES, LUCAS WILLIAM; GERMANO, MARIANA GOMES; LIMA, AMANDA BARBOSA; TSAI, SIU MUI. Assessment of Bacterial bph Gene in Amazonian Dark Earth and Their Adjacent Soils. PLoS One, v. 9, n. 6, . Web of Science Citations: 1. (11/50914-3)

ESTELA SILVA-STENICO‚ M.; PACHECO‚ F.T.H.; RODRIGUES‚ J.L.M.; CARRILHO‚ E.; TSAI‚ S.M.. Growth and siderophore production of Xylella fastidiosa under iron-limited conditions. MICROBIOLOGICAL RESEARCH, v. 160, n. 4, p. 429-436, .

MARIA FEDATTO‚ L.; SILVA-STENICO‚ M.E.; ETCHEGARAY‚ A.; PACHECO‚ F.T.H.; RODRIGUES‚ J.L.M.; TSAI‚ S.M.. Detection and characterization of protease secreted by the plant pathogen Xylella fastidiosa. MICROBIOLOGICAL RESEARCH, v. 161, n. 3, p. 263-272, .

SILVA-STENICO, M. E.; PACHECO, F. T. H.; PEREIRA-FILHO, E. R.; RODRIGUES, J. L. M.; SOUZA, A. N.; ETCHEGARAY, A.; GOMES, J. E.; TSAI, S. M.. Nutritional deficiency in citrus with symptoms of citrus variegated chlorosis disease. Brazilian Journal of Biology, v. 69, n. 3, p. 859-864, . Web of Science Citations: 6. (98/16265-1)

NAVARRETE, ACACIO APARECIDO; DINIZ, TATIANA ROSA; PEREZ BRAGA, LUCAS PALMA; SILVA, GENIVALDO GUEIROS ZACARIAS; FRANCHINI, JULIO CEZAR; ROSSETTO, RAFFAELLA; EDWARDS, ROBERT ALAN; TSAI, SIU MUI. Multi-Analytical Approach Reveals Potential Microbial Indicators in Soil for Sugarcane Model Systems. PLoS One, v. 10, n. 6, . Web of Science Citations: 21. (14/06077-8, 12/13321-7, 11/51749-6)

SCHULZ, KRISTIN; HUNGER, SINDY; BROWN, GEORGE G.; TSAI, SIU M.; CERRI, CARLOS C.; CONRAD, RALF; DRAKE, HAROLD L.. Methanogenic food web in the gut contents of methane-emitting earthworm Eudrilus eugeniae from Brazil. ISME Journal, v. 9, n. 8, p. 1778-1792, . Web of Science Citations: 14. (11/50914-3, 08/58114-3)

DURRER, ADEMIR; MARGENOT, ANDREW J.; SILVA, LUCAS C. R.; BOHANNAN, BRENDAN J. M.; NUSSLEIN, KLAUS; VAN HAREN, JOOST; ANDREOTE, FERNANDO D.; PARIKH, SANJAI J.; RODRIGUES, JORGE L. MAZZA. Beyond total carbon: conversion of amazon forest to pasture alters indicators of soil C cycling. BIOGEOCHEMISTRY, v. 152, n. 2-3, . Web of Science Citations: 0. (14/50320-4)

GOSS-SOUZA, DENNIS; MENDES, LUCAS WILLIAM; RODRIGUES, JORGE LUIZ MAZZA; TSAI, SIU MUI. Ecological Processes Shaping Bulk Soil and Rhizosphere Microbiome Assembly in a Long-Term Amazon Forest-to-Agriculture Conversion. MICROBIAL ECOLOGY, v. 79, n. 1, p. 110-122, . Web of Science Citations: 1. (08/58114-3, 14/50320-4)

LEMOS, LEANDRO NASCIMENTO; MANOHARAN, LOKESHWARAN; MENDES, LUCAS WILLIAM; VENTURINI, ANDRESSA MONTEIRO; PYLRO, VICTOR SATLER; TSAI, SIU MUI. Metagenome assembled-genomes reveal similar functional profiles ofCPR/Patescibacteria phyla in soils. ENVIRONMENTAL MICROBIOLOGY REPORTS, v. 12, n. 6, . Web of Science Citations: 0. (15/13546-7, 14/50320-4, 16/18215-1, 17/24037-1, 17/09643-2)

MENDES, LUCAS WILLIAM; TSAI, SIU MUI. Distinct taxonomic and functional composition of soil microbiomes along the gradient forest-restinga-mangrove in southeastern Brazil. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, v. 111, n. 1, p. 101-114, . Web of Science Citations: 5. (04/13910-6)

CARNIELLI, CAROLINA MORETTO; SOARES MACEDO, CAROLINA CARNEIRO; DE ROSSI, TATIANE; GRANATO, DANIELA CAMPOS; RIVERA, CESAR; DOMINGUES, ROMENIA RAMOS; PAULETTI, BIANCA ALVES; YOKOO, SAMI; HEBERLE, HENRY; BUSSO-LOPES, ARIANE FIDELIS; et al. Combining discovery and targeted proteomics reveals a prognostic signature in oral cancer. NATURE COMMUNICATIONS, v. 9, . Web of Science Citations: 13. (13/16483-0, 09/54067-3, 09/53998-3, 10/19278-0, 16/07846-0)

BRAGA, LUCAS P. P.; ALVES, RAFAEL F.; DELLIAS, MARINA T. F.; NAVARRETE, ACACIO A.; BASSO, THIAGO O.; TSAI, SIU M.. Vinasse fertirrigation alters soil resistome dynamics: an analysis based on metagenomic profiles. BIODATA MINING, v. 10, . Web of Science Citations: 4. (13/22845-2, 12/13321-7)

DE CHAVES, MIRIAM GONCALVES; SILVA, GENIVALDO GUEIROS Z.; ROSSETTO, RAFFAELLA; EDWARDS, ROBERT ALAN; TSAI, SIU MUI; NAVARRETE, ACACIO APARECIDO. Acidobacteria Subgroups and Their Metabolic Potential for Carbon Degradation in Sugarcane Soil Amended With Vinasse and Nitrogen Fertilizers. FRONTIERS IN MICROBIOLOGY, v. 10, . Web of Science Citations: 0. (11/51749-6, 17/03575-5, 15/09436-1, 12/13321-7, 14/06077-8)

MERLOTI, LUIS FERNANDO; MENDES, LUCAS WILLIAM; PEDRINHO, ALEXANDRE; DE SOUZA, LEANDRO FONSECA; FERRARI, BEATRIZ MARIA; TSAI, SIU MUI. Forest-to-agriculture conversion in Amazon drives soil microbial communities and N-cycle. SOIL BIOLOGY & BIOCHEMISTRY, v. 137, . Web of Science Citations: 1. (14/50320-4)

MENDES, LUCAS WILLIAM; DE CHAVES, MIRIAM GONCALVES; FONSECA, MARILEY DE CASSIA; MENDES, RODRIGO; RAAIJMAKERS, JOS M.; TSAI, SIU MUI. Resistance Breeding of Common Bean Shapes the Physiology of the Rhizosphere Microbiome. FRONTIERS IN MICROBIOLOGY, v. 10, . Web of Science Citations: 0. (14/03217-3, 15/00251-9)

MENDES, LUCAS WILLIAM; MENDES, RODRIGO; RAAIJMAKERS, JOS M.; TSAI, SIU MUI. Breeding for soil-borne pathogen resistance impacts active rhizosphere microbiome of common bean. ISME Journal, v. 12, n. 12, p. 3038-3042, . Web of Science Citations: 5. (14/03217-3, 15/00251-9)

GOSS-SOUZA, DENNIS; MENDES, LUCAS WILLIAM; BORGES, CLOVIS DANIEL; RODRIGUES, JORGE L. M.; TSAI, SIU MUI. Amazon forest-to-agriculture conversion alters rhizosphere microbiome composition while functions are kept. FEMS MICROBIOLOGY ECOLOGY, v. 95, n. 3, . Web of Science Citations: 1. (08/58114-3, 14/50320-4)

PEDRINHO, ALEXANDRE; MENDES, LUCAS WILLIAM; MERLOTI, LUIS FERNANDO; DA FONSECA, MARILEY DE CASSIA; CANNAVAN, FABIANA DE SOUZA; TSAI, SIU MUI. Forest-to-pasture conversion and recovery based on assessment of microbial communities in Eastern Amazon rainforest. FEMS MICROBIOLOGY ECOLOGY, v. 95, n. 3, . Web of Science Citations: 1. (14/50320-4, 17/16757-4)

FLÁVIA TERESA HANSEN PACHECO; MARIA ESTELA SILVA-STENICO; AUGUSTO ETCHEGARAY; JOSÉ ELIAS GOMES; EMANUEL CARRILHO; SIU MUI TSAI. Specific amplification of iron receptor genes in Xylella fastidiosa strains from different hosts. GENETICS AND MOLECULAR BIOLOGY, v. 29, n. 1, p. -, .

ALVAREZ, DASIEL OBREGON; MENDES, KASSIO FERREIRA; TOSI, MICAELA; DE SOUZA, LEANDRO FONSECA; CAMPOS CEDANO, JOHNNY CARLOS; DE SOUZA FALCAO, NEWTON PAULO; DUNFIELD, KARI; TSAI, SIU MUI; TORNISIELO, VALDEMAR LUIZ. Sorption-desorption and biodegradation of sulfometuron-methyl and its effects on the bacterial communities in Amazonian soils amended with aged biochar. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, v. 207, . Web of Science Citations: 0. (16/24695-6, 16/17683-1)

VENTURINI, ANDRESSA MONTEIRO; NAKAMURA, FERNANDA MANCINI; GONTIJO, JULIA BRANDAO; DA FRANCA, ALINE GIOVANA; YOSHIURA, CAIO AUGUSTO; MANDRO, JESSICA ADRIELE; TSAI, SIU MUI. Robust DNA protocols for tropical soils. HELIYON, v. 6, n. 5, . Web of Science Citations: 0. (15/23758-1, 15/13546-7, 14/50320-4, 15/12282-6, 15/08564-6, 18/14974-0)

RODRIGUES, JORGE L. M.; PELLIZARI, VIVIAN H.; MUELLER, REBECCA; BAEK, KYUNGHWA; JESUS, EDERSON DA C.; PAULA, FABIANA S.; MIRZA, BABUR; HAMAOUI, JR., GEORGE S.; TSAI, SIU MUI; FEIGL, BRIGITTE; et al. Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v. 110, n. 3, p. 988-993, . Web of Science Citations: 164. (08/58114-3)

NAVARRETE, ACACIO A.; KURAMAE, EIKO E.; DE HOLLANDER, MATTIAS; PIJL, AGATA S.; VAN VEEN, JOHANNES A.; TSAI, SIU M.. Acidobacterial community responses to agricultural management of soybean in Amazon forest soils. FEMS MICROBIOLOGY ECOLOGY, v. 83, n. 3, p. 607-621, . Web of Science Citations: 81. (08/58114-3)

MILENE MOREIRA; DILMAR BARETTA; SIU MUI TSAI; ELKE JURANDY BRAN NOGUEIRA CARDOSO. Spore density and root colonization by arbuscular mycorrhizal fungi in preserved or disturbed Araucaria angustifolia (Bert.) O. Ktze. ecosystems. Scientia Agricola, v. 63, n. 4, p. 380-385, .

RODRIGUES‚ J.L.M.; SILVA-STENICO‚ M.E.; DE SOUZA‚ A.N.; LOPES‚ J.R.S.; TSAI‚ S.M.. In situ probing of Xylella fastidiosa in honeydew of a xylem sap-feeding insect using 16S rRNA-targeted fluorescent oligonucleotides. ENVIRONMENTAL MICROBIOLOGY, v. 8, n. 4, p. 747-754, . (98/16265-1, 00/10168-6)

TAKETANI, RODRIGO GOUVEA; LIMA, AMANDA BARBOSA; JESUS, EDERSON DA CONCEICAO; TEIXEIRA, WENCESLAU GERALDES; TIEDJE, JAMES M.; TSAI, SIU MUI. Bacterial community composition of anthropogenic biochar and Amazonian anthrosols assessed by 16S rRNA gene 454 pyrosequencing. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, v. 104, n. 2, p. 233-242, . Web of Science Citations: 26. (06/06700-0)

NAVARRETE, ACACIO APARECIDO; TAKETANI, RODRIGO GOUVEA; MENDES, LUCAS WILLIAM; CANNAVAN, FABIANA DE SOUZA; DE SOUZA MOREIRA, FATIMA MARIA; TSAI, SIU MUI. LAND-USE SYSTEMS AFFECT ARCHAEAL COMMUNITY STRUCTURE AND FUNCTIONAL DIVERSITY IN WESTERN AMAZON SOILS. Revista Brasileira de Ciência do Solo, v. 35, n. 5, p. 1527-1540, . Web of Science Citations: 25. (08/58114-3)

MEYER, KYLE M.; KLEIN, ANN M.; RODRIGUES, JORGE L. M.; NUESSLEIN, KLAUS; TRINGE, SUSANNAH G.; MIRZA, BABUR S.; TIEDJE, JAMES M.; BOHANNAN, BRENDAN J. M.. Conversion of Amazon rainforest to agriculture alters community traits of methane-cycling organisms. Molecular Ecology, v. 26, n. 6, p. 1547-1556, . Web of Science Citations: 17. (14/50320-4)

MENDES, LUCAS WILLIAM; DE LIMA BROSSI, MARIA JULIA; KURAMAE, EIKO EURYA; TSAI, SIU MUI. Land-use system shapes soil bacterial communities in Southeastern Amazon region. APPLIED SOIL ECOLOGY, v. 95, p. 151-160, . Web of Science Citations: 37. (08/58114-3, 10/20353-7, 11/51749-6)

BRAGA, LUCAS P. P.; YOSHIURA, CAIO A.; BORGES, CLOVIS D.; HORN, MARCUS A.; BROWN, GEORGE G.; DRAKE, HAROLD L.; TSAI, SIU M.. Disentangling the influence of earthworms in sugarcane rhizosphere. SCIENTIFIC REPORTS, v. 6, . Web of Science Citations: 4. (15/11120-2, 13/22845-2, 15/08564-6, 11/51749-6)

BRAGA, LUCAS P. P.; YOSHIURA, CAIO A.; BORGES, CLOVIS D.; HORN, MARCUS A.; BROWN, GEORGE G.; DRAKE, HAROLD L.; TSAI, SIU M.. Disentangling the influence of earthworms in sugarcane rhizosphere. SCIENTIFIC REPORTS, v. 6, . Web of Science Citations: 4. (15/11120-2, 13/22845-2, 15/08564-6, 11/51749-6)

LIMA, AMANDA BARBOSA; CANNAVAN, FABIANA SOUZA; NAVARRETE, ACACIO APARECIDO; TEIXEIRA, WENCESLAU GERALDES; KURAMAE, EIKO EURYA; TSAI, SIU MUI. Amazonian Dark Earth and Plant Species from the Amazon Region Contribute to Shape Rhizosphere Bacterial Communities. MICROBIAL ECOLOGY, v. 69, n. 4, SI, p. 855-866, . Web of Science Citations: 21. (11/50914-3, 11/51749-6)

MENDES, LUCAS W.; KURAMAE, EIKO E.; NAVARRETE, ACACIO A.; VAN VEEN, JOHANNES A.; TSAI, SIU M.. Taxonomical and functional microbial community selection in soybean rhizosphere. ISME Journal, v. 8, n. 8, p. 1577-1587, . Web of Science Citations: 168. (08/58114-3, 10/20353-7, 11/51749-6)

Academic Publications

(References retrieved automatically from State of São Paulo Research Institutions)

KONZEN, Enéas Ricardo. Expressão gênica e diversidade nucleotídica de novos genes DREB em feijoeiro (Phaseolus vulgaris L.) e sua associação com parâmetros de déficit hídrico. Tese (Doutorado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (11/12484-7

MENDES, Lucas William. Metagenoma da conversão da floresta Amazônica: impactos na diversidade taxonômica e funcional dos micro-organismos do solo. Tese (Doutorado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (10/20353-7

BRAGA, Lucas Palma Perez. Desvendando a influência de minhocas na comunidade microbiana de rizosfera de cana-de-açúcar. Tese (Doutorado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (13/22845-2

VENTURINI, Andressa Monteiro. Efeito do uso do solo e da rizosfera de cana-de-açúcar na estrutura e abundância de comunidades de Bacteria e do filo Verrucomicrobia. Dissertação (Mestrado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (13/05087-7

MENDES, Lucas William. Análise molecular das estruturas e diversidade de comunidades microbianas em solo de manguezal preservado da Ilha do Cardoso-SP. Dissertação (Mestrado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (07/01859-4

SILVA, Mariana Gomes Germano. Diversidade funcional em solos de Terra Preta de Índio da Amazônia e carvão pirogênico. Tese (Doutorado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (06/59344-7

REDONDO, Mariana Leticia Costa. Caracterização molecular por AFLP (Amplified Fragment Length Polymorphism) de acessos de pinhão manso (Jatropha curcas L.). Dissertação (Mestrado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (08/56134-7

RECCHIA, Gustavo Henrique. Identificação de genes diferencialmente expressos em feijoeiro envolvidos na resistência ao estresse hídrico. Dissertação (Mestrado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (08/56136-0

CANNAVAN, Fabiana de Souza. A estrutura e composição de comunidades microbianas (Bacteria e Archaea) em fragmentos de carvão pirogênico de Terra Preta de Índio da Amazônia Central. Tese (Doutorado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (07/54266-0

BIAZUZO, Milena Moura de Araujo. Análise da expressão diferencial de genes relacionados à tolerância ao déficit hídrico em feijoeiro comum. Tese (Doutorado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (09/01037-0

RECCHIA, Gustavo Henrique. Análise da expressão gênica diferencial causada pela interação de feijoeiros (Phaseolus vulgaris L.) e fungos micorrízicos arbusculares sob efeito de déficit hídrico. Tese (Doutorado) -  Centro de Energia Nuclear na Agricultura.  Universidade de São Paulo (USP).  Piracicaba.  (11/12485-3

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