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José Fernando Garcia

CV Lattes ResearcherID


Universidade Estadual Paulista (UNESP). Campus de Jaboticabal. Faculdade de Ciências Agrárias e Veterinárias (FCAV)  (Institutional affiliation for the last research proposal)
Birthplace: Brazil

Graduated from the Faculty of Veterinary Medicine, University of Sao Paulo (1989), Master of Veterinary Science, Federal University of Rio Grande do Sul (1992) and Ph.D. in Animal Reproduction at the University of São Paulo (1995). He is currently Professor (Biochemistry), at UNESP - Universidade Estadual Paulista Julio de Mesquita Filho, having previously been professor at the University of São Paulo (1995-1997) and scientist at the Joint FAO / IAEA Programme in Nuclear Techniques in Food and Agriculture (2003 to 2005). Coordinates the Laboratory of Animal Biochemistry and Molecular Biology of UNESP - Araçatuba, part of the International Atomic Energy Agency (IAEA) Collaborating Centre for Animal Genomics and Bioinformatics. Active in different fields of biotechnology, particularly in: livestock breeding and selection assisted by molecular markers and diagnosis of infectious and parasitic diseases in animals using nucleic acid analysis methods. In the context of technological innovation, over the past 20 years has participated in the start up of three biotechnology companies in Brazil, specialized in ​​genomics applied to animals, plants and humans. He has extensive international experience in the field of Biotechnology, maintaining active professional network accumulated during several technical visits, participation in conferences and professional activities abroad. Active member of the International Society of Animal Genetics (ISAG) and International Embryo Transfer Society (IETS). In Brazil, was Treasurer of the Brazilian Society of Embryo Technology (SBTE) for two terms (96/97 and 98/99) and its President (2008/2010). In 2010 completed an MBA at Fundacao Getulio Vargas in Sao Paulo, in the area of Bussiness ​​Strategic Management. Member of the National Biosafety Technical Commission (CTNBio) of the Ministry of Science and Technology during the 2010 to 2015. (Source: Lattes Curriculum)

Research grants
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FAPESP support in numbers * Updated October 19, 2019
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Keywords used by the researcher
Scientific publications resulting from Research Grants and Scholarships under the grantee's responsibility (32)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

Publications28
Citations447
Cit./Article16.0
Data from Web of Science

UTSUNOMIYA, YURI T.; DO CARMO, ADRIANA S.; CARVALHEIRO, ROBERTO; NEVES, HAROLDO H. R.; MATOS, MARCIA C.; ZAVAREZ, LUDMILLA B.; O'BRIEN, ANA M. PEREZ; SOELKNER, JOHANN; MCEWAN, JOHN C.; COLE, JOHN B.; et al. Genome-wide association study for birth weight in Nellore cattle points to previously described orthologous genes affecting human and bovine height. BMC GENETICS, v. 14, . Web of Science Citations: 59. (11/16643-2, 10/52030-2)

UTSUNOMIYA, YURI TANI; O'BRIEN, ANA MARIA PEREZ; SONSTEGARD, TAD STEWART; VAN TASSELL, CURTIS PAUL; DO CARMO, ADRIANA SANTANA; MESZAROS, GABOR; SOELKNER, JOHANN; GARCIA, JOSE FERNANDO. Detecting Loci under Recent Positive Selection in Dairy and Beef Cattle by Combining Different Genome-Wide Scan Methods. PLoS One, v. 8, n. 5, . Web of Science Citations: 52. (11/16643-2, 10/52030-2)

FRANCISCA ELDA FERREIRA DIAS; CÁRIS MARONE NUNES; TÂNIA VASCONCELOS CAVALCANTE; ANDRÉA AZEVEDO PIRES DE CASTRO; JORGE LUIS FERREIRA; JOSÉ FERNANDO GARCIA. PCR fluorescente associada à eletroforese capilar como ferramenta de diagnóstico de bactérias no semen. Ciênc. anim. bras., v. 14, n. 3, p. 366-372, .

PORTO-NETO, LAERCIO R.; SONSTEGARD, TAD S.; LIU, GEORGE E.; BICKHART, DEREK M.; DA SILVA, MARCOS V. B.; MACHADO, MARCO A.; UTSUNOMIYA, YURI T.; GARCIA, JOSE F.; GONDRO, CEDRIC; VAN TASSELL, CURTIS P.. Genomic divergence of zebu and taurine cattle identified through high-density SNP genotyping. BMC Genomics, v. 14, . Web of Science Citations: 55. (10/52030-2)

PORTO-NETO, LAERCIO R.; BICKHART, DEREK M.; LANDAETA-HERNANDEZ, ANTONIO J.; UTSUNOMIYA, YURI T.; PAGAN, MELVIN; JIMENEZ, ESBAL; HANSEN, PETER J.; DIKMEN, SERDAL; SCHROEDER, STEVEN G.; KIM, EUI-SOO; et al. Convergent Evolution of Slick Coat in Cattle through Truncation Mutations in the Prolactin Receptor. FRONTIERS IN GENETICS, v. 9, . Web of Science Citations: 8. (14/01095-8)

UTSUNOMIYA, ADAM T. H.; SANTOS, DANIEL J. A.; BOISON, SOLOMON A.; UTSUNOMIYA, YURI T.; MILANESI, MARCO; BICKHART, DEREK M.; AJMONE-MARSAN, PAOLO; SOELKNER, JOHANN; GARCIA, JOSE F.; DA FONSECA, RICARDO; et al. Revealing misassembled segments in the bovine reference genome by high resolution linkage disequilibrium scan. BMC Genomics, v. 17, . Web of Science Citations: 12. (10/52030-2, 14/01095-8)

KHAYATZADEH, N.; MESZAROS, G.; UTSUNOMIYA, Y. T.; SCHMITZ-HSU, F.; SEEFRIED, F.; SCHNYDER, U.; FERENCAKOVIC, M.; GARCIA, J. F.; CURIK, I.; SOELKNER, J.. Effects of breed proportion and components of heterosis for semen traits in a composite cattle breed. JOURNAL OF ANIMAL BREEDING AND GENETICS, v. 135, n. 1, p. 45-53, . Web of Science Citations: 0. (16/07531-0, 14/01095-8)

HARTATI, HARTATI; UTSUNOMIYA, YURI TANI; SONSTEGARD, TAD STEWART; GARCIA, JOSE FERNANDO; JAKARIA, JAKARIA; MULADNO, MULADNO. Evidence of Bos javanicus x Bos indicus hybridization and major QTLs for birth weight in Indonesian Peranakan Ongole cattle. BMC GENETICS, v. 16, . Web of Science Citations: 5. (14/01095-8)

O'BRIEN, ANA M. PEREZ; HOELER, DANIELA; BOISON, SOLOMON A.; MILANESI, MARCO; BOMBA, LORENZO; UTSUNOMIYA, YURI T.; CARVALHEIRO, ROBERTO; NEVES, HAROLDO H. R.; DA SILVA, MARCOS V. B.; VANTASSELL, CURTIS P.; et al. Low levels of taurine introgression in the current Brazilian Nelore and Gir indicine cattle populations. GENETICS SELECTION EVOLUTION, v. 47, . Web of Science Citations: 13. (10/52030-2, 14/01095-8)

O'BRIEN, ANA M. PEREZ; MESZAROS, GABOR; UTSUNOMIYA, YURI T.; SONSTEGARD, TAD S.; GARCIA, J. FERNANDO; VAN TASSELL, CURTIS P.; CARVALHEIRO, ROBERTO; DA SILVA, MARCOS V. B.; SOLKNER, JOHANN. Linkage disequilibrium levels in Bos indicus and Bos taurus cattle using medium and high density SNP chip data and different minor allele frequency distributions. LIVESTOCK SCIENCE, v. 166, n. SI, p. 121-132, . Web of Science Citations: 24. (11/16643-2, 10/52030-2)

BOISON, S. A.; NEVES, H. H. R.; PEREZ O'BRIEN, A. M.; UTSUNOMIYA, Y. T.; CARVALHEIRO, R.; DA SILVA, M. V. G. B.; SOELKNER, J.; GARCIA, J. F.. Imputation of non-genotyped individuals using genotyped progeny in Nellore, a Bos indicus cattle breed. LIVESTOCK SCIENCE, v. 166, n. SI, p. 176-189, . Web of Science Citations: 5. (11/16643-2, 10/52030-2)

NEVES, HAROLDO H. R.; CARVALHEIRO, ROBERTO; PEREZ O'BRIEN, ANA M.; UTSUNOMIYA, YURI T.; DO CARMO, ADRIANA S.; SCHENKEL, FLAVIO S.; SOELKNER, JOHANN; MCEWAN, JOHN C.; VAN TASSELL, CURTIS P.; COLE, JOHN B.; et al. Accuracy of genomic predictions in Bos indicus (Nellore) cattle. GENETICS SELECTION EVOLUTION, v. 46, . Web of Science Citations: 40. (11/16643-2, 10/52030-2, 10/06185-4)

UTSUNOMIYA, YURI T.; CARMO, ADRIANA S.; NEVES, HAROLDO H. R.; CARVALHEIRO, ROBERTO; MATOS, MARCIA C.; ZAVAREZ, LUDMILLA B.; ITO, PIER K. R. K.; O'BRIEN, ANA M. PEREZ; SOELKNER, JOHANN; PORTO-NETO, LAERCIO R.; et al. Genome-Wide Mapping of Loci Explaining Variance in Scrotal Circumference in Nellore Cattle. PLoS One, v. 9, n. 2, . Web of Science Citations: 24. (11/16643-2, 10/52030-2)

UTSUNOMIYA, YURI TANI; BOMBA, LORENZO; LUCENTE, GIORDANA; COLLI, LICIA; NEGRINI, RICCARDO; LENSTRA, JOHANNES ARJEN; ERHARDT, GEORG; GARCIA, JOSE FERNANDO; AJMONE-MARSAN, PAOLO; DIVERSITY, EUROPEAN CATTLE GENETIC. Revisiting AFLP fingerprinting for an unbiased assessment of genetic structure and differentiation of taurine and zebu cattle. BMC GENETICS, v. 15, . Web of Science Citations: 14. (11/16643-2, 13/12829-0)

O'BRIEN, ANA M. PEREZ; UTSUNOMIYA, YURI T.; MESZAROS, GABOR; BICKHART, DEREK M.; LIU, GEORGE E.; VAN TASSELL, CURTIS P.; SONSTEGARD, TAD S.; DA SILVA, MARCOS V. B.; GARCIA, JOSE FERNANDO; SOELKNER, JOHANN. Assessing signatures of selection through variation in linkage disequilibrium between taurine and indicine cattle. GENETICS SELECTION EVOLUTION, v. 46, . Web of Science Citations: 32. (11/16643-2, 10/52030-2)

SANTANA, MIGUEL H. A.; UTSUNOMIYA, YURI T.; NEVES, HAROLDO H. R.; GOMES, RODRIGO C.; GARCIA, JOSE F.; FUKUMASU, HEIDGE; SILVA, SAULO L.; OLIVEIRA JUNIOR, GERSON A.; ALEXANDRE, PAMELA A.; LEME, PAULO R.; et al. Genome-wide association analysis of feed intake and residual feed intake in Nellore cattle. BMC GENETICS, v. 15, . Web of Science Citations: 30. (11/16643-2, 12/03551-5, 12/02039-9)

SANTANA, M. H. A.; UTSUNOMIYA, Y. T.; NEVES, H. H. R.; GOMES, R. C.; GARCIA, J. F.; FUKUMASU, H.; SILVA, S. L.; LEME, P. R.; COUTINHO, L. L.; ELER, J. P.; et al. Genome-wide association study for feedlot average daily gain in Nellore cattle (Bos indicus). JOURNAL OF ANIMAL BREEDING AND GENETICS, v. 131, n. 3, p. 210-216, . Web of Science Citations: 10. (11/16643-2, 12/03551-5, 12/02039-9)

UTSUNOMIYA, YURI T.; RIBEIRO, ERICA S.; QUINTAL, AMANDA P. N.; SANGALLI, JULIANO R.; GAZOLA, VALQUIRIA R.; PAULA, HENRIQUE B.; TRINCONI, CRISTIANA M.; LIMA, VALERIA M. F.; PERRI, SILVIA H. V.; TAYLOR, JEREMY F.; et al. Genome-Wide Scan for Visceral Leishmaniasis in Mixed-Breed Dogs Identifies Candidate Genes Involved in T Helper Cells and Macrophage Signaling. PLoS One, v. 10, n. 9, . Web of Science Citations: 13. (14/01095-8)

TORRECILHA, R. B. P.; UTSUNOMIYA, Y. T.; BOSCO, A. M.; ALMEIDA, B. F.; PEREIRA, P. P.; NARCISO, L. G.; PEREIRA, D. C. M.; BAPTISTIOLLI, L.; CALVO-BADO, L.; COURTENAY, O.; et al. Correlations between peripheral parasite load and common clinical and laboratory alterations in dogs with visceral leishmaniasis. PREVENTIVE VETERINARY MEDICINE, v. 132, p. 83-87, . Web of Science Citations: 5. (14/01095-8)

UTSUNOMIYA, YURI T.; MILANESI, MARCO; UTSUNOMIYA, ADAM T. H.; AJMONE-MARSAN, PAOLO; GARCIA, JOSE F.. GHap: an R package for genome-wide haplotyping. Bioinformatics, v. 32, n. 18, p. 2861-2862, . Web of Science Citations: 7. (14/01095-8)

PEREIRA, ANIRENE G. T.; UTSUNOMIYA, YURI T.; MILANESI, MARCO; TORRECILHA, RAFAELA B. P.; CARMO, ADRIANA S.; NEVES, HAROLDO H. R.; CARVALHEIRO, ROBERTO; AJMONE-MARSAN, PAOLO; SONSTEGARD, TAD S.; SOLKNER, JOHANN; et al. Pleiotropic Genes Affecting Carcass Traits in Bos indicus (Nellore) Cattle Are Modulators of Growth. PLoS One, v. 11, n. 7, . Web of Science Citations: 5. (14/01095-8, 13/02552-0)

UTSUNOMIYA, YURI TANI; MILANESI, MARCO; HARTH UTSUNOMIYA, ADAM TAITI; PINTOR TORRECILHA, RAFAELA BEATRIZ; KIM, EUI-SOO; COSTA, MARCIO SILVA; AGUIAR, TAMIRIS SAYURI; SCHROEDER, STEVEN; DO CARMO, ADRIANA SANTANA; CARVALHEIRO, ROBERTO; et al. A PLAG1 mutation contributed to stature recovery in modern cattle. SCIENTIFIC REPORTS, v. 7, . Web of Science Citations: 9. (10/52030-2, 16/07531-0, 14/01095-8)

BATISTA, LUIS F. S.; UTSUNOMIYA, YURI T.; SILVA, THAIS B. F.; CARNEIRO, MARIANA M.; PAIVA, JOYR S. F.; SILVA, RAFAELA B.; TOMOKANE, THAISE Y.; ROSSI, CLAUDIO N.; PACHECO, ACACIO D.; TORRECILHA, RAFAELA B. P.; et al. Canine leishmaniasis: Genome-wide analysis and antibody response to Lutzomyia longipalpis saliva. PLoS One, v. 13, n. 5, . Web of Science Citations: 0. (12/05847-9, 12/50285-9, 14/01095-8)

COLLI, LICIA; MILANESI, MARCO; VAJANA, ELIA; IAMARTINO, DANIELA; BOMBA, LORENZO; PUGLISI, FRANCESCO; DEL CORVO, MARCELLO; NICOLAZZI, EZEQUIEL L.; AHMED, SAHAR S. E.; HERRERA, JESUS R. V.; et al. New Insights on Water Buffalo Genomic Diversity and Post-Domestication Migration Routes From Medium Density SNP Chip Data. FRONTIERS IN GENETICS, v. 9, . Web of Science Citations: 6. (16/05787-7)

BATISTA, LUIS F. S.; UTSUNOMIYA, YURI T.; SILVA, THAIS B. F.; DIAS, RAISSA A.; TOMOKANE, THAISE Y.; PACHECO, ACACIO D.; DA MATTA, VANIA L. R.; SILVEIRA, FERNANDO T.; MARCONDES, MARY; NUNES, CARIS M.; et al. Genome-Wide Association Study of Cell-Mediated Response in Dogs Naturally Infected by Leishmania infantum. Infection and Immunity, v. 84, n. 12, p. 3629-3637, . Web of Science Citations: 2. (12/05847-9, 12/50285-9, 14/01095-8)

AGUIAR, TAMIRIS SAYURI; PINTOR TORRECILHA, RAFAELA BEATRIZ; MILANESI, MARCO; HARTH UTSUNOMIYA, ADAM TAITI; TRIGO, BEATRIZ BATISTA; TIJJANI, ABDULFATAI; MUSA, HASSAN HUSSEIN; LOPES, FLAVIA LOMBARDI; AJMONE-MARSAN, PAOLO; CARVALHEIRO, ROBERTO; et al. Association of Copy Number Variation at Intron 3 of HMGA2 With Navel Length in Bos indicus. FRONTIERS IN GENETICS, v. 9, . Web of Science Citations: 1. (10/52030-2, 17/08373-1, 16/07531-0, 14/01095-8, 16/05787-7)

BARBOSA‚ D.S.; MARANHÃO‚ R.C.; ARAÚJO‚ F.B.; CHANG‚ Y.H.; HIRATA‚ M.H.; ABDALLA‚ D.S.P.. Sialic acid and oxidizability of low density lipoprotein subfractions of hyperlipidemic patients. CLINICAL BIOCHEMISTRY, v. 28, n. 4, p. 435-441, . (10/52030-2)

DIAS‚ F.E.F.; AOKI‚ S.M.; MESQUITA‚ L.G.; NUNES‚ C.M.; GARCIA‚ J.F.. Detecção de Leptospira pomona em sêmen bovino por eletroforese capilar fluorescente. Brazilian Journal of Veterinary Research and Animal Science, v. 43, n. 3, p. 394-399, .

PALOMBO, V; MILANESI, M.; SGORLON, S.; CAPOMACCIO, S.; MELE, M.; NICOLAZZI, E.; AJMONE-MARSAN, P.; PILLA, F.; STEFANON, B.; D'ANDREA, M.. Genome-wide association study of milk fatty acid composition in Italian Simmental and Italian Holstein cows using single nucleotide polymorphism arrays. JOURNAL OF DAIRY SCIENCE, v. 101, n. 12, p. 11004-11019, . Web of Science Citations: 3. (16/05787-7)

COLLI, LICIA; MILANESI, MARCO; TALENTI, ANDREA; BERTOLINI, FRANCESCA; CHEN, MINHUI; CRISA, ALESSANDRA; DALY, KEVIN GERARD; DEL CORVO, MARCELLO; GULDBRANDTSEN, BERNT; LENSTRA, JOHANNES A.; et al. Genome-wide SNP profiling of worldwide goat populations reveals strong partitioning of diversity and highlights post-domestication migration routes. GENETICS SELECTION EVOLUTION, v. 50, . Web of Science Citations: 11. (16/05787-7)

VAJANA, ELIA; BARBATO, MARIO; COLLI, LICIA; MILANESI, MARCO; ROCHAT, ESTELLE; FABRIZI, ENRICO; MUKASA, CHRISTOPHER; DEL CORVO, MARCELLO; MASEMBE, CHARLES; MUWANIKA, VINCENT B.; et al. Combining Landscape Genomics and Ecological Modelling to Investigate Local Adaptation of Indigenous Ugandan Cattle to East Coast Fever. FRONTIERS IN GENETICS, v. 9, . Web of Science Citations: 2. (16/05787-7)

MILAZZOTTO‚ MP; RAHAL‚ P.; NICHI‚ M.; MIRANDA-NETO‚ T.; TEIXEIRA‚ LA; FERRAZ‚ JBS; ELER‚ JP; CAMPAGNARI‚ F.; GARCIA‚ JF. New molecular variants of hypothalamus-pituitary-gonad axis genes and their association with early puberty phenotype in Bos taurus indicus(Nellore). LIVESTOCK SCIENCE, v. 114, n. 2, p. 274-279, .

Academic Publications

(References retrieved automatically from State of São Paulo Research Institutions)

DIAS, Francisca Elda Ferreira. Detecção de patógenos no sêmen bovino pela técnica de PCR multiplex fluorescente. . 64f. Tese (Doutorado) – . Universidade Estadual Paulista "Júlio de Mesquita Filho" Faculdade de Ciências Agrárias e Veterinárias. Jaboticabal. (01/05486-1)

AOKI, Sergio Moraes. Desenvolvimento de novas metodologias para a identificação e caracterização genética de Herpesvírus Bovino tipo 1(BHV-1). 2014. 105f. Tese (Doutorado) – . Universidade Estadual Paulista "Júlio de Mesquita Filho" Instituto de Biociências (Campus de Botucatu). Botucatu. (02/08369-9)

AVELAR, Gustavo Arbex. Associação entre marcadores de DNA microssatélite e características quantitativas de interesse produtivo em bovinos da raça Nelore(Bos indicus). . 66f. Tese (Doutorado) – . Universidade Estadual Paulista "Júlio de Mesquita Filho" Instituto de Biociências (Campus de Botucatu). Botucatu. (02/08154-2)

ZAVAREZ, Ludmilla Balbo. Análise de perfis epigenômicos em células nucleadas do sangue durante a exposição ao calor em bovinos das raças angus e nelore. 2018. Tese (Doutorado) – . Universidade Estadual Paulista "Júlio de Mesquita Filho" Faculdade de Ciências Agrárias e Veterinárias. (15/08553-4)

TORRECILHA, Rafaela Beatriz Pintor. Varreduras genômicas para a detecção de variantes genéticas associadas à reprodução de cães. 2018. Tese (Doutorado) – . Universidade Estadual Paulista "Júlio de Mesquita Filho" Faculdade de Ciências Agrárias e Veterinárias. (17/08373-1)

UTSUNOMIYA, Yuri Tani. Sobre a origem e dispersão da mutação do gene PLAG1 em bovinos. 2017. Tese (Doutorado) – . Universidade Estadual Paulista "Júlio de Mesquita Filho" Faculdade de Ciências Agrárias e Veterinárias. (14/01095-8)

UTSUNOMIYA, Yuri Tani. Genome-wide scans to uncover loci underlying bovine reproductive biology. 2013. Dissertação (Mestrado) - . Universidade Estadual Paulista "Júlio de Mesquita Filho" Faculdade de Ciências Agrárias e Veterinárias. (11/16643-2)

ZAVAREZ, Ludmilla Balbo. Avaliação da autozigosidade em vacas Nelore (Bos indicus) através de genótipos SNP de alta densidade. 2014. Dissertação (Mestrado) - . Universidade Estadual Paulista "Júlio de Mesquita Filho" Faculdade de Ciências Agrárias e Veterinárias. (13/15869-2)

MILAZZOTTO, Marcella Pecora. Mutações no gene do receptor do hormônio luteinizante (LHR) bovino e associação com precocidade sexual em fêmeas Bos primigenius indicus (Nelore). . 86f. Dissertação (Mestrado) - . Universidade Estadual Paulista "Júlio de Mesquita Filho" Instituto de Biociências (Campus de Botucatu). Botucatu. (99/03322-0)

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