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Carla Columbano de Oliveira

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Universidade de São Paulo (USP). Instituto de Química (IQ)  (Institutional affiliation for the last research proposal)
Birthplace: Brazil

graduate at Ciências Biológicas from Universidade Estadual de Londrina (1985), master's at Genetics from Universidade Federal do Rio Grande do Sul (1990) and ph.d. at Biologia Molecular from Gesellshaft Fur Biotechnologische Forshung (1994). Has experience in Biochemistry, acting on the following subjects: interação proteína-proteína, processamento de rna, interação proteína-rna, saccharomyces cerevisiae and expressão gênica. (Source: Lattes Curriculum)

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Scientific publications resulting from Research Grants and Scholarships under the grantee's responsibility (23)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

Data from Web of Science

CEPEDA, LEIDY PAOLA P.; BAGATELLI, FELIPE F. M.; SANTOS, RENATA M.; SANTOS, MARLON D. M.; NOGUEIRA, FABIO C. S.; OLIVEIRA, CARLA C.. The ribosome assembly factor Nop53 controls association of the RNA exosome with pre-60S particles in yeast. Journal of Biological Chemistry, v. 294, n. 50, p. 19365+, . Web of Science Citations: 0. (15/06477-9, 15/05776-2)

BAGATELLI, FELIPE F. M.; DE LUNA VITORINO, FRANCISCA N.; DA CUNHA, JULIA P. C.; OLIVEIRA, CARLA C.. The ribosome assembly factor Nop53 has a structural role in the formation of nuclear pre-60S intermediates, affecting late maturation events. Nucleic Acids Research, v. 49, n. 12, p. 7053-7074, . Web of Science Citations: 0. (13/07467-1, 15/06477-9, 15/05776-2)

DA SILVA, CAROLINA A. P. T.; LOURENCO, ROGERIO F.; MAZZON, RICARDO R.; RIBEIRO, RODOLFO A.; MARQUES, MARILIS V.. Transcriptomic analysis of the stationary phase response regulator SpdR in Caulobacter crescentus. BMC Microbiology, v. 16, . Web of Science Citations: 6. (12/10563-0, 11/17513-5, 14/04046-8, 11/18847-4)

PRIETO, MARCELA B.; GEORG, RAPHAELA C.; GONZALES-ZUBIATE, FERNANDO A.; LUZ, JULIANA S.; OLIVEIRA, CARLA C.. Nop17 is a key R2TP factor for the assembly and maturation of box C/D snoRNP complex. BMC MOLECULAR BIOLOGY, v. 16, . Web of Science Citations: 9. (12/51200-7, 10/51842-3)

GONZALES, FERNANDO A.; ZANCHIN, NILSON I. T.; LUZ, JULIANA SILVA DA; OLIVEIRA, CARLA COLUMBANO DE. Characterization of Saccharomyces cerevisiae Nop17p, a novel Nop58p-interacting pre-rRNA processing. Journal of Molecular Biology, v. 346, n. 2, p. 437-455, .

GONZALES-ZUBIATE, FERNANDO A.; OKUDA, ELLEN K.; DA CUNHA, JULIA P. C.; OLIVEIRA, CARLA COLUMBANO. Identification of karyopherins involved in the nuclear import of RNA exosome subunit Rrp6 in Saccharomyces cerevisiae. Journal of Biological Chemistry, v. 292, n. 29, p. 12267-12284, . Web of Science Citations: 1. (12/50196-6, 10/51842-3, 15/06477-9)

OKUDA, ELLEN K.; GONZALES-ZUBIATE, FERNANDO A.; GADAL, OLIVIER; OLIVEIRA, CARLA C.. Nucleolar localization of the yeast RNA exosome subunit Rrp44 hints at early pre-rRNA processing as its main function. Journal of Biological Chemistry, v. 295, n. 32, p. 11195-11213, . Web of Science Citations: 0. (17/17777-9, 15/06477-9, 18/19451-6)

GRANATO‚ D.C.; GONZALES‚ F.A.; LUZ‚ J.S.; CASSIOLA‚ F.; MACHADO-SANTELLI‚ G.M.; OLIVEIRA‚ C.C.. Nop53p‚ an essential nucleolar protein that interacts with Nop17p and Nip7p‚ is required for pre-rRNA processing in Saccharomyces cerevisiae. FEBS Journal, v. 272, n. 17, p. 4450-4463, .

SANTOS, MARCIA C. T.; GOLDFEDER, MAURICIO B.; ZANCHIN, NILSON I. T.; OLIVEIRA, CARLA C.. The Essential Nucleolar Yeast Protein Nop8p Controls the Exosome Function during 60S Ribosomal Subunit Maturation. PLoS One, v. 6, n. 6, . Web of Science Citations: 1.

MIGUEL, RODRIGO BERNARDI; DIVINA PETERSEN, PHILIPPE ALEXANDRE; GONZALES-ZUBIATE, FERNANDO A.; OLIVEIRA, CARLA COLUMBANO; KUMAR, NARESH; DO NASCIMENTO, RAFAEL RODRIGUES; PETRILLI, HELENA MARIA; DA COSTA FERREIRA, ANA MARIA. Inhibition of cyclin-dependent kinase CDK1 by oxindolimine ligands and corresponding copper and zinc complexes. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, v. 20, n. 7, p. 1205-1217, . Web of Science Citations: 9. (13/07937-8, 11/50318-1, 10/51842-3)

LOURENCO, ROGERIO F.; LEME, ADRIANA F. P.; OLIVEIRA, CARLA C.. Proteomic Analysis of Yeast Mutant RNA Exosome Complexes. JOURNAL OF PROTEOME RESEARCH, v. 12, n. 12, p. 5912-5922, . Web of Science Citations: 4. (10/51842-3)

SANTOS, JULIANA S.; DA SILVA, CAROLINA A. P. T.; BALHESTEROS, HELOISE; LOURENCO, ROGERIO F.; MARQUES, MARILIS V.. CspC regulates the expression of the glyoxylate cycle genes at stationary phase in Caulobacter. BMC Genomics, v. 16, . Web of Science Citations: 4. (12/10563-0, 11/21883-2, 11/17513-5, 14/04046-8)

GATTI DA SILVA, GUILHERME H.; JURICA, MELISSA S.; CHAGAS DA CUNHA, JULIA P.; OLIVEIRA, CARLA C.; COLTRI, PATRICIA P.. Human RNF113A participates of pre-mRNA splicing in vitro. Journal of Cellular Biochemistry, v. 120, n. 5, p. 8764-8774, . Web of Science Citations: 1. (17/06994-9, 11/20664-5, 13/02738-7, 10/51842-3)

LUZ‚ JS; TAVARES‚ JR; GONZALES‚ FA; SANTOS‚ MCT; OLIVEIRA‚ CC. Analysis of the Saccharomyces cerevisiae exosome architecture and of the RNA binding activity of Rrp40p. Biochimie, v. 89, n. 5, p. 686-691, .

OLIVEIRA‚ C.C.; GONZALES‚ F.A.; ZANCHIN‚ N.I.T.. Temperature-sensitive mutants of the exosome subunit Rrp43p show a deficiency in mRNA degradation and no longer interact with the exosome. Nucleic Acids Research, v. 30, n. 19, p. 4186-4198, .

GOLDFEDER, MAURICIO B.; OLIVEIRA, CARLA C.. Utp25p, a nucleolar Saccharomyces cerevisiae protein, interacts with U3 snoRNP subunits and affects processing of the 35S pre-rRNA. FEBS Journal, v. 277, n. 13, p. 2838-2852, . Web of Science Citations: 17.

LUZ, JULIANA S.; RAMOS, CELSO R. R.; SANTOS, MARCIA C. T.; COLTRI, PATRICIA P.; PALHANO, FERNANDO L.; FOGUEL, DEBORA; ZANCHIN, NILSON I. T.; OLIVEIRA, CARLA C.. Identification of archaeal proteins that affect the exosome function in vitro. BMC BIOCHEMISTRY, v. 11, . Web of Science Citations: 10.

GRANATO‚ D.C.; MACHADO-SANTELLI‚ G.M.; OLIVEIRA‚ C.C.. Nop53p interacts with 5.8 S rRNA co-transcriptionally‚ and regulates processing of pre-rRNA by the exosome. FEBS Journal, v. 275, n. 16, p. 4164-4178, .

COLTRI, PATRICIA P.; OLIVEIRA, CARLA C.. Cwc24p Is a General Saccharomyces cerevisiae Splicing Factor Required for the Stable U2 snRNP Binding to Primary Transcripts. PLoS One, v. 7, n. 9, . Web of Science Citations: 8.

LUZ, JULIANA S.; GEORG, RAPHAELA C.; GOMES, CARLOS H.; MACHADO-SANTELLI, GLAUCI M.; OLIVEIRA, CARLA C.. Sdo1p, the yeast orthologue of Shwachman-Bodian-Diamond syndrome protein, binds RNA and interacts with nuclear rRNA-processing factors. YEAST, v. 26, n. 5, p. 287-298, . Web of Science Citations: 15.

DA SILVEIRA, VIVIAN CHAGAS; BENEZRA, HENRI; LUZ, JULIANA SILVA; GEORG, RAPHAELA CASTRO; OLIVEIRA, CARLA COLUMBANO; DA COSTA FERREIRA, ANA MARIA. Binding of oxindole-Schiff base copper(II) complexes to DNA and its modulation by the ligand. Journal of Inorganic Biochemistry, v. 105, n. 12, SI, p. 1692-1703, . Web of Science Citations: 35. (05/60596-8)

RAMOS, C. R. R.; ABREU, P. A. E.; NASCIMENTO, A. L. T. O.; HO, P. L.. A high-copy T7 Escherichia coli expression vector for the production of recombinant proteins with a minimal N-terminal His-tagged fusion peptide. Brazilian Journal of Medical and Biological Research, v. 37, n. 8, p. 1103-1109, .

CARVALHO, FELIPE A.; BARROS, MOISES R. A.; GIROTTO, THIERRY P. F.; PERONA, M. GRISELDA; OLIVEIRA, CARLA C.. Utilization of Grafix for the Detection of Transient Interactors of Saccharomyces cerevisiae Spliceosome Subcomplexes. JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, n. 165, . Web of Science Citations: 0. (15/06477-9)

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