Abstract
Fluorescent microscope infrastructure to support scientific research. (AU)
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Marie-Anne Van Sluys
CV Lattes
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Universidade de São Paulo (USP). Instituto de Biociências (IB) (Institutional affiliation from the last research proposal) Birthplace: Brazil
Serves as a Full Professor at the Botany Department of the University of São Paulo (USP), holds a BA in biological sciences (Rio de Janeiro State University- UERJ, 1983) and a Ph.D. in Genetic Microbiology (University of Paris-Sud 11 - France, 1989). Dr. Van Sluys heads USP's Genomes and Transposable Elements (GaTE) Laboratory. Research interests focus on molecular processes that result in biodiversity and plant-microbe interaction. By means of comparative genomics and the study of transposable elements, insight was gained into the diversification of Xanthomonadaceae and in plants. She was nominated to the Sao Paulo State Academy of Sciences (ACIESP) in 2015, to the Brazilian Academy of Sciences (ABC) in 2016, and to TWAS (2023). Over 50 professionals joined her group at different stages of their careers and now work in private or public sectors in Brazil or abroad. (Source: Lattes Curriculum)
| Articles published in Pesquisa FAPESP Magazine about the researcher: |
| The era of whole genome sequencing |
| La era de la secuenciación completa de genomas |
| La caña de azúcar mapeada |
| Sugarcane mapped |
| Wandering DNA |
| El ADN gitano |
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| News published in Agência FAPESP Newsletter about the researcher |
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| TITULO |
| Articles published in other media outlets ( ): |
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| VEICULO: TITULO (DATA) |
| VEICULO: TITULO (DATA) |
Research grants
- Multi-user equipment 2016/17545-8: fluorescent microscope, AP.EMU
- Multi-user equipment 2016/17545-8: real time PCR quantstudio 7 flex, AP.EMU
Abstract
Quantitative PCR infrastructure to support scientific research. (AU)
- Crops for the Future Collaborative Partnership, AP.R
Abstract
To represent FAPESP at FFAR initiative under Crop of the Future Collaborative. This initiative will promote interdisciplinarity between Agronomy, Omics, Plant Physiology, Genetics, Breeding and Data Science towards improving plants to a changing environment. (AU)
- Genes, genomes & transposable elements contribution to plant-microbe interaction: a sugarcane study case, AP.BIOEN.TEM
Abstract
Plant-Microbe interaction is a fundamental process in the biosphere that impacts natural ecosystems as well as agroecosystems. The understanding of the biological components and processes that control this interaction is expected to improve crop productivity and monitor environmental quality. Our approach to tackle this complex system is to use genome-wide molecular and bioinformatic tool…
- Extending synthetic biology collaborations between WISB and BSSB, AP.R SPRINT
Abstract
The overall aim of this proposal is to build a productive and mutually beneficial partnership with BSSB at USP. This is one arm of our growing international Synthetic Biology Network, which also includes CoSBI (Boston), UPF (Barcelona) and CNB (Madrid). A strong partnership between WISB and BSSB will enable us to establish joint research projects that are funded through BBSRC-FAPESP. Esta…
(Only some records are available in English at this moment)
Scholarships in Brazil
- Physcomitrium patens cell transformation and visualization with fluorescent protein GFP, BP.EVC
Abstract
The present project will introduce the student to the plant-microbe interaction research area. Both plant tissue culture and OMICs are part of the training program. (AU)
- Xanthomonas albilineans gene expression profile under different light conditions, BP.EVC
Abstract
The present research plan will introduce the student to plant microbe interaction area. The student will get hand of molecular and cellular tools working with bacterial cells.
- Detection of long non-coding RNAs in the total transcriptome of sugarcane under biotic stress, BP.DD
Abstract
Sugarcane (Saccharum sp.) is one of the most economically important agricultural crops in the world, used in the food and bioenergy industries, and is a sustainable alternative to fossil fuels. Brazil, due to its favorable climate, stands out as the largest global producer of this crop. However, sugarcane productivity is often threatened by pathogens that reduce productivity. On the other…
- Curating in the assembly and annotation of bacterial genomes, BP.TT
- Identification of protein structures using AlphaFold on plant-microorganism transcriptome data., BP.TT
- Biotic stress caused by X albilineans in Poaceae species, BP.EVC
Abstract
The student will be exposed to research and methodologies in the field of plant-microbe interaction. Several molecular methodologies will be learned that are routinely used in Life Sciences. (AU)
(Only some records are available in English at this moment)
Scholarships abroad
- Pan grass syntenic gene set based on sugarcane inclusion and the thiamine biosynthesis pathway, BE.EP.DD
Abstract
The development of a pan-grass synthetic gene set can yield a high-resolution view of the patterns and processes of molecular evolution. However, leveraging information across multiple genomes remains a significant challenge in nearly all eukaryotic systems, especially sugarcane, a highly polyploid grass. These challenges range from studying the evolution of chromosome structure to findin…
- The influence of mobile genetic elements on Xanthomonas oryzae lineages, BE.EP.DR
Abstract
Mobile genetic elements have largely influenced the bacterial genomic evolution. They play an important role in increasing genetic variability and therefore, promoting genetically diverse populations in a constantly changing environment. My Doctorate research project investigates how mobile elements potentially influenced the evolutionary history of phytopathogenic Xanthomonas oryzae line…
- Construction of plant models for functional study of sugarcane Thi1 gene variants, BE.EP.DD
Abstract
Sugarcane (Saccharum spp.) is a C4 photosynthesis monocot and is an important tropical crop grown for sucrose production. The thi1 gene was the first reported to be involved in plant thiamine biosynthesis. THI1 protein is known to be involved in the synthesis of the thiazole ring, a thiamine (vitamin B1) component, which is an essential co-factor in several carbohydrate and amino acid met…
(Only some records are available in English at this moment)
Total / Available in English
| 2 / 2 | Ongoing grants |
| 19 / 13 | Completed research grants |
| 3 / 3 | Ongoing scholarships in Brazil |
| 71 / 31 | Completed scholarships in Brazil |
| 5 / 5 | Completed scholarships abroad |
| 100 / 54 | All research grants and scholarships |
| Associated processes | |