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Deyvid Emanuel Amgarten

CV Lattes GoogleMyCitations ResearcherID ORCID

Birthplace: Brazil

Currently, a PhD student by the Interunits in Bioinformatics Graduate Program at University of Sao Paulo (2017). MSc in bioinformatics by the same graduate program (2016). The dissertation involved the computational analysis of prokaryotic viruses (bacteriophages) in metagenomic and metatransciptomic samples and isolated phages from composting. Was a visiting researcher (2016) at the Viral Bioinformatics Resource Center, in Victoria Canada. BSc in Biological sciences by the Biosciences Institute of the Universidade de São Paulo, Brazil (2013). During the course, has developed a component of automatic annotation of metabolic pathways (KEGG) for the EGene platform. Has experience in computational characterization of sequences, development of tools, in vrology and metagenomics. Has a good knowledge about programming in C and Perl, Python and basic JAVA. For for information, please refer to: (Source: Lattes Curriculum)

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FAPESP support in numbers * Updated June 19, 2021
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Scientific publications resulting from Research Grants and Scholarships under the grantee's responsibility (3)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

Data from Web of Science

AMGARTEN, DEYVID; BRAGA, LUCAS P. P.; DA SILVA, ALINE M.; SETUBAL, JOAO C.. MARVEL, a Tool for Prediction of Bacteriophage Sequences in Metagenomic Bins. FRONTIERS IN GENETICS, v. 9, . Web of Science Citations: 13. (11/50870-6, 14/16450-8)

BRAGA, LUCAS P. P.; SOUCY, SHANNON M.; AMGARTEN, DEYVID E.; DA SILVA, ALINE M.; SETUBAL, JOAO C.. Bacterial Diversification in the Light of the Interactions with Phages: The Genetic Symbionts and Their Role in Ecological Speciation. FRONTIERS IN ECOLOGY AND EVOLUTION, v. 6, . Web of Science Citations: 5. (11/50870-6)

AMGARTEN, DEYVID; MARTINS, LAYLA FARAGE; LOMBARDI, KAREN CRISTINA; ANTUNES, LUCIANA PRINCIPAL; SILVA DE SOUZA, ANA PAULA; NICASTRO, GIANLUCCA GONCALVES; KITAJIMA, ELLIOTT WATANABE; QUAGGIO, RONALDO BENTO; UPTON, CHRIS; SETUBAL, JOAO CARLOS; et al. Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages. BMC Genomics, v. 18, . Web of Science Citations: 6. (14/16450-8, 15/14334-3, 11/50870-6)

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