NASCIMENTO‚ A.; CATALANO-DUPUY‚ D.; BERNARDES‚ A.; NETO‚ M.; SANTOS‚ M.; CECCARELLI‚ E.; POLIKARPOV‚ I.. Crystal structures of Leptospira interrogans FAD-containing ferredoxin-NADP+ reductase and its complex with NADP+. BMC STRUCTURAL BIOLOGY, v. 7, n. 1, p. 69, 2007. (06/00182-8, 04/08070-9)
MUNIZ, HELOISA DOS SANTOS; NASCIMENTO, ALESSANDRO S.. Ligand- and receptor-based docking with LiBELa. Journal of Computer-Aided Molecular Design, v. 29, n. 8, p. 713-723, AUG 2015. Citações Web of Science: 4. (14/06565-2)
DA SILVA, FLAVIA M. C.; DOS SANTOS, JADEMILSON C.; CAMPOS, JESSICA L. O.; MAFUD, ANA CAROLINA; POLIKARPOV, IGOR; FIGUEIRA, ANA CAROLINA M.; NASCIMENTO, ALESSANDRO S.. Structure-based identification of novel PPAR gamma ligands. Bioorganic & Medicinal Chemistry Letters, v. 23, n. 21, p. 5795-5802, NOV 1 2013. Citações Web of Science: 15. (10/15376-8)
DE AZEVEDO, ERIKA CHANG; NASCIMENTO, ALESSANDRO S.. Energy landscape of the domain movement in Staphylococcus aureus UDP-N-acetylglucosamine 2-epimerase. Journal of Structural Biology, v. 207, n. 2, p. 158-168, AUG 1 2019. Citações Web of Science: 0. (15/13684-0, 17/18173-0, 15/26722-8)
SARTORI, GERALDO RODRIGUES; NASCIMENTO, ALESSANDRO S.. Comparative Analysis of Electrostatic Models for Ligand Docking. FRONTIERS IN MOLECULAR BIOSCIENCES, v. 6, JUL 3 2019. Citações Web of Science: 0. (15/13684-0, 17/18173-0, 15/26722-8)
FLORINDO, RENATA N.; SOUZA, VALQUIRIA P.; MANZINE, LIVIA R.; CAMILO, CESAR M.; MARANA, SANDRO R.; POLIKARPOV, IGOR; NASCIMENTO, ALESSANDRO S.. Structural and biochemical characterization of a GH3 beta-glucosidase from the probiotic bacteria Bifidobacterium adolescentis. Biochimie, v. 148, p. 107-115, MAY 2018. Citações Web of Science: 3. (14/06565-2, 14/19439-5, 08/56255-9)
FARRO, ERICK GIANCARLO S.; LEITE, ANA ELISA T.; SILVA, ISABELA A.; FILGUEIRAS, JEFFERSON G.; DE AZEVEDO, EDUARDO R.; POLIKARPOV, IGOR; NASCIMENTO, ALESSANDRO S.. GH43 endo-arabinanase from Bacillus licheniformis: Structure, activity and unexpected synergistic effect on cellulose enzymatic hydrolysis. International Journal of Biological Macromolecules, v. 117, p. 7-16, OCT 1 2018. Citações Web of Science: 2. (14/06565-2, 14/03768-0, 15/13684-0)
NASCIMENTO, ALESSANDRO S.. Structural requirement for PPAR gamma binding revealed by a meta analysis of holo-crystal structures. Biochimie, v. 92, n. 5, p. 499-506, MAY 2010. Citações Web of Science: 4. (08/58735-8, 04/08070-9)
MALTAROLLO, VINICIUS G.; TOGASHI, MARIE; NASCIMENTO, ALESSANDRO S.; HONORIO, KATHIA M.. Structure-Based Virtual Screening and Discovery of New PPAR delta/gamma Dual Agonist and PPAR delta and gamma Agonists. PLoS One, v. 10, n. 3, MAR 13 2015. Citações Web of Science: 14. (14/06565-2, 11/18981-2)
VAZ DE LIMA, LUIS ANTONIO C.; NASCIMENTO, ALESSANDRO S.. MolShaCS: A free and open source tool for ligand similarity identification based on Gaussian descriptors. EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, v. 59, p. 296-303, JAN 2013. Citações Web of Science: 12. (10/15376-8)
KIM, KYOUNG-YUN; NASCIMENTO, ALESSANDRO S.; GOLUBEV, ALEXANDER M.; POLIKARPOV, IGOR; KIM, CHUNG-SEI; KANG, SU-IL; KIM, SU-IL. Catalytic mechanism of inulinase from Arthrobacter sp. S37. Biochemical and Biophysical Research Communications, v. 371, n. 4, p. 600-605, July 2008. (04/08070-9, 06/00182-8)
NASCIMENTO, ALESSANDRO S.; KRAUCHENCO, SANDRA; GOLUBEV, ALEXANDER M.; GUSTCHINA, ALLA; WLODAWER, ALEXANDER; POLIKARPOV, IGOR. Statistical coupling analysis of aspartic proteinases based on crystal structures of the Trichoderma reesei enzyme and its complex with pepstatin A. Journal of Molecular Biology, v. 382, n. 3, p. 763-778, Oct. 2008. Citações Web of Science: 7. (04/08070-9, 99/03387-4)
WATANABE, LEANDRA; DE MOURA, PATRICIA RIBEIRO; NASCIMENTO, ALESSANDRO SILVA; COLAU, DIDIER; DUMOUTIER, LAURE; RENAULD, JEAN-CHRISTOPHE; POLIKARPOV, IGOR. Crystallization and preliminary X-ray diffraction analysis of human IL-22 bound to its soluble decoy receptor IL-22BP. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, v. 65, n. 2, p. 102-104, FEB 2009. Citações Web of Science: 1. (06/01534-5, 06/60860-0, 04/08070-9, 06/00182-8)
GOLUBEV, ALEXANDER M.; ROJAS, ADRIANA L.; NASCIMENTO, ALESSANDRO S.; BLEICHER, LUCAS; KULMINSKAYA, ANNA A.; ENEYSKAYA, ELENA V.; POLIKARPOV, IGOR. Crystallization and Preliminary Crystallographic Analysis of Laminarinase from Rhodothermus marinus: A Case of Pseudomerohedral Twinning. PROTEIN AND PEPTIDE LETTERS, v. 15, n. 10, p. 1142-1144, OCT 2008. Citações Web of Science: 1. (04/08070-9, 06/00182-8)
LIBERATO, MARCELO VIZONA; NASCIMENTO, ALESSANDRO S.; AYERS, STEVEN D.; LIN, JEAN Z.; CVORO, ALEKSANDRA; SILVEIRA, RODRIGO L.; MARTINEZ, LEANDRO; SOUZA, PAULO C. T.; SAIDEMBERG, DANIEL; DENG, TUO; et al. Medium Chain Fatty Acids Are Selective Peroxisome Proliferator Activated Receptor (PPAR) gamma Activators and Pan-PPAR Partial Agonists. PLoS One, v. 7, n. 5, MAY 23 2012. Citações Web of Science: 70. (06/06831-8, 04/08070-9, 06/00182-8)
GODOY, ANDRE SCHUTZER; CAMILO, CESAR MOISES; KADOWAKI, MARCO ANTONIO; MUNIZ, HELOISA DOS S.; SANTO, MELISSA ESPIRITO; MURAKAMI, MARIO TYAGO; NASCIMENTO, ALESSANDRO S.; POLIKARPOV, IGOR. Crystal structure of beta 1 -> 6-galactosidase from Bifidobacterium bifidum S17: trimeric architecture, molecular determinants of the enzymatic activity and its inhibition by alpha-galactose. FEBS Journal, v. 283, n. 22, p. 4097-4112, NOV 2016. Citações Web of Science: 5. (14/06565-2, 08/56255-9, 09/52840-7, 11/05712-3, 11/20505-4, 09/05328-9)
FLORINDO, RENATA N.; SOUZA, VALQUIRIA P.; MUTTI, HEMILY S.; CAMILO, CESAR; MANZINE, LIVIA REGINA; MARANA, SANDRO R.; POLIKARPOV, IGOR; NASCIMENTO, ALESSANDRO S.. Structural insights into beta-glucosidase transglycosylation based on biochemical, structural and computational analysis of two GH1 enzymes from Trichoderma harzianum. NEW BIOTECHNOLOGY, v. 40, n. B, p. 218-227, JAN 25 2017. Citações Web of Science: 9. (14/06565-2, 14/19439-5, 08/56255-9)
MUNIZ, HELOISA S.; NASCIMENTO, ALESSANDRO S.. Towards a critical evaluation of an empirical and volume-based solvation function for ligand docking. PLoS One, v. 12, n. 3, MAR 21 2017. Citações Web of Science: 1. (14/06565-2, 10/15376-8)
SONODA, MILTON T.; GODOY, ANDRE S.; PELLEGRINI, VANESSA O. A.; KADOWAKI, MARCO A. S.; NASCIMENTO, ALESSANDRO S.; POLIKARPOV, IGOR. Structure and dynamics of Trichoderma harzianum Cel7B suggest molecular architecture adaptations required for a wide spectrum of activities on plant cell wall polysaccharides. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, v. 1863, n. 6, p. 1015-1026, JUN 2019. Citações Web of Science: 1. (14/06565-2, 15/13684-0, 17/18173-0)
MINARI, KARINE; DE AZEVEDO, ERIKA CHANG; RODRIGUES KIRALY, VANESSA THOMAZ; HELENO BATISTA, FERNANDA APARECIDA; DE MORAES, FABIO ROGERIO; DE MELO, FERNANDO ALVES; NASCIMENTO, ALESSANDRO SILVA; GAVA, LISANDRA MARQUES; INACIO RAMOS, CARLOS HENRIQUE; BORGES, JULIO CESAR. Thermodynamic analysis of interactions of the Hsp90 with adenosine nucleotides: A comparative perspective. International Journal of Biological Macromolecules, v. 130, p. 125-138, JUN 1 2019. Citações Web of Science: 1. (11/23110-0, 12/50161-8, 17/07335-9, 14/07206-6, 15/26722-8, 09/53989-4, 17/18173-0, 13/25646-0)
BARRA, ANGELICA LUANA C.; DANTAS, LIVIA DE OLIVEIRA C.; MORAO, LUANA GALVAO; GUTIERREZ, RAISSA F.; POLIKARPOV, IGOR; WRENGER, CARSTEN; NASCIMENTO, ALESSANDRO S.. Essential Metabolic Routes as a Way to ESKAPE From Antibiotic Resistance. FRONTIERS IN PUBLIC HEALTH, v. 8, FEB 28 2020. Citações Web of Science: 0. (15/13684-0, 17/18173-0, 15/26722-8)