Microbial diversity of a full-scale UASB reactor applied to poultry slaughterhouse wastewater treatment: integration of 16S rRNA gene amplicon and shotgun metagenomic sequencing

Autor(es)

Delforno, Tiago Palladino ; Lacerda Junior, Gileno Vieira ; Noronha, Melline F. ; Sakamoto, Isabel K. ; Varesche, Maria Bernadete A. ; Oliveira, Valeria M.

• Tipo de documento: Artigo Científico
• Fonte: MICROBIOLOGYOPEN; v. 6, n. 3 JUN 2017.
• Citações Web of Science: 9

Resumo

The 16S rRNA gene amplicon and whole-genome shotgun metagenomic (WGSM) sequencing approaches were used to investigate wide-spectrum profiles of microbial composition and metabolic diversity from a full-scale UASB reactor applied to poultry slaughterhouse wastewater treatment. The data were generated by using MiSeq 2 x 250 bp and HiSeq 2 x 150 bp Illumina sequencing platforms for 16S amplicon and WGSM sequencing, respectively. Each approach revealed a distinct microbial community profile, with Pseudomonas and Psychrobacter as predominant genus for the WGSM dataset and Clostridium and Methanosaeta for the 16S rRNA gene amplicon dataset. The virome characterization revealed the presence of two viral families with Bacteria and Archaea as host, Myoviridae, and Siphoviridae. A wide functional diversity was found with predominance of genes involved in the metabolism of acetone, butanol, and ethanol synthesis; and one-carbon metabolism (e.g., methanogenesis). Genes related to the acetotrophic methanogenesis pathways were more abundant than methylotrophic and hydrogenotrophic, corroborating the taxonomic results that showed the prevalence of the acetotrophic genus Methanosaeta. Moreover, the dataset indicated a variety of metabolic genes involved in sulfur, nitrogen, iron, and phosphorus cycles, with many genera able to act in all cycles. BLAST analysis against Antibiotic Resistance Genes Database (ARDB) revealed that microbial community contained 43 different types of antibiotic resistance genes, some of them were associated with growth chicken promotion (e.g., bacitracin, tetracycline, and polymyxin). (AU)

• Processo FAPESP: 13/09386-9 - Análise integrada de metagenômica e metatranscriptômica do solo da Caatinga e prospecção de genes envolvidos na degradação de lignina.
• Beneficiário: Gileno Vieira Lacerda Júnior
• Modalidade de apoio: Bolsas no Brasil - Doutorado
• Processo FAPESP: 14/16426-0 - Metagenômica da microbiota de reatores anaeróbios aplicados na degradação de surfactante aniônico em água residuária de lavanderia comercial
• Beneficiário: Tiago Palladino Delforno
• Modalidade de apoio: Bolsas no Brasil - Pós-Doutorado