Bacterial communities associated with sugarcane under different agricultural management exhibit a diversity of plant growth-promoting traits and evidence of synergistic effect

Autor(es)

Teheran-Sierra, Luis Guillermo ^{[1, 2]} ; Goncalves Funnicelli, Michelli Inacio ^{[1, 2]} ; Lopes de Carvalho, Lucas Amoroso ^{[1, 2]} ; Tiraboschi Ferro, Maria Ines ^[1] ; Soares, Marcos Antonio ^[3] ; Pinheiro, Daniel Guariz ^[1]

Afiliação do(s) autor(es)

^[1] Univ Estadual Paulista Unesp, Fac Ciencias Agr & Vet, Campus Jaboticabal, BR-14884900 Jaboticabal, SP - Brazil

^[2] Univ Estadual Paulista Unesp, Fac Ciencias Agr & Vet, Programa Posgrad Microbiol Agr, Campus Jaboticabal, BR-14884900 Jaboticabal, SP - Brazil

^[3] Univ Fed Mato Grosso, Inst Biociencias, Av Fernando Correa 2367, Cuiaba, MT - Brazil

• Tipo de documento: Artigo Científico
• Fonte: MICROBIOLOGICAL RESEARCH; v. 247, JUN 2021.
• Citações Web of Science: 0

Resumo

Plant-associated microbiomes have been a target of interest for the prospection of microorganisms, which may be acting as effectors to increase agricultural productivity. For years, the search for beneficial microorganisms has been carried out from the characterization of functional traits of growth-promotion using tests with a few isolates. However, eventually, the expectations with positive results may not be realized when the evaluation is performed in association with plants. In our study, we accessed the cultivable sugarcane microbiome under two conditions of agronomic management: organic and conventional. From the use of a new customized culture medium, we recovered 944 endophytic and epiphytic bacterial communities derived from plant roots, stalks, leaves, and rhizospheric soil. This could be accomplished by using a large-scale approach, initially performing an in planta (Cynodon dactylon) screening process of inoculation to avoid early incompatibility. The inoculation was performed using the bacterial communities, considering that in this way, they could act synergistically. This process resulted in 38 candidate communities, 17 of which had higher Indole-3-acetic acid (IAA) production and phosphate solubilization activity and, were submitted to a new in planta test using Brachiaria ruziziensis and quantification of functional traits for growth-promotion and physiological tests. Enrichment analysis of selected communities has shown that they derived mainly from epiphytic populations of sugarcane stalks under conventional management. The sequencing of the V3-V4 region of the 16S rRNA gene revealed 34 genera and 24 species distributed among the phylum Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria. We also observed a network of genera in these communities where the genus Chryseobacterium stands out with a greater degree of interaction, indicating a possible direct or indirect role as a keystone taxon in communities with plantgrowth promotion capacities. From the results achieved, we can conclude that the approach is useful in the recovery of a set of sugarcane bacterial communities and that there is, evidence of synergistic action providing benefits to plants, and that they are compatible with plants of the same family (Poaceae). Thus, we are reporting the beneficial bacterial communities identified as suitable candidates with rated potential to be exploited as bioinoculants for crops. (AU)

• Processo FAPESP: 17/09008-5 - Perfis metagenômicos de comunidades microbianas associadas a cana-de-açúcar sob cultivo orgânico versus convencional e prospecção de microrganismos promotores de crescimento em plantas
• Beneficiário: Daniel Guariz Pinheiro
• Modalidade de apoio: Auxílio à Pesquisa - Regular