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Left ventricle segmentation combining deep learning and deformable models with anatomical constraints

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Autor(es):
Ribeiro, Matheus A. O. ; Nunes, Fatima L. S.
Número total de Autores: 2
Tipo de documento: Artigo Científico
Fonte: JOURNAL OF BIOMEDICAL INFORMATICS; v. 142, p. 15-pg., 2023-05-03.
Resumo

Segmentation of the left ventricle is a key approach in Cardiac Magnetic Resonance Imaging for calculating biomarkers in diagnosis. Since there is substantial effort required from the expert, many automatic segmenta-tion methods have been proposed, in which deep learning networks have obtained remarkable performance. However, one of the main limitations of these approaches is the production of segmentations that contain anatomical errors. To avoid this limitation, we propose a new fully-automatic left ventricle segmentation method combining deep learning and deformable models. We propose a new level set energy formulation that includes exam-specific information estimated from the deep learning segmentation and shape constraints. The method is part of a pipeline containing pre-processing steps and a failure correction post-processing step. Experiments were conducted with the Sunnybrook and ACDC public datasets, and a private dataset. Results suggest that the method is competitive, that it can produce anatomically consistent segmentations, has good generalization ability, and is often able to estimate biomarkers close to the expert. (AU)

Processo FAPESP: 21/14902-2 - Abordagem híbrida adaptativa para segmentação do ventrículo esquerdo em exames de Ressonância Magnética Cardíaca
Beneficiário:Matheus Alberto de Oliveira Ribeiro
Modalidade de apoio: Bolsas no Brasil - Doutorado
Processo FAPESP: 19/22116-7 - Segmentação automática do ventrículo esquerdo em exames de ressonância magnética cardíaca
Beneficiário:Matheus Alberto de Oliveira Ribeiro
Modalidade de apoio: Bolsas no Brasil - Mestrado