Random-walk model of the sodium-glucose transporter SGLT2 with stochastic steps and inhibition

Autor(es)

Barreto, Yan B. ; Alencar, Adriano M.

• Tipo de documento: Artigo Científico
• Fonte: JOURNAL OF PHYSICS-CONDENSED MATTER; v. 34, n. 18, p. 9-pg., 2022-05-04.

Resumo

Random-walk models are frequently used to model distinct natural phenomena such as diffusion processes, stock-market fluctuations, and biological systems. Here, we present a random-walk model to describe the dynamics of glucose uptake by the sodium-glucose transporter of type 2, SGLT2. Our starting point is the canonical alternating-access model, which suggests the existence of six states for the transport cycle. We propose the inclusion of two new states to this canonical model. The first state is added to implement the recent discovery that the Na+ ion can exit before the sugar is released into the proximal tubule epithelial cells. The resulting model is a seven-state mechanism with stochastic steps. Then we determined the transition probabilities between these seven states and used them to write a set of master equations to describe the time evolution of the system. We showed that our model converges to the expected equilibrium configuration and that the binding of Na+ and glucose to SGLT2 in the inward-facing conformation must be necessarily unordered. After that, we added another state to implement inhibition in the model. Our results reproduce the experimental dependence of glucose uptake on the inhibitor concentration and they reveal that the inhibitors act by decreasing the number of available SGLT2s, which increases the chances of glucose escaping reabsorption. (AU)

• Processo FAPESP: 19/16338-7 - Modelagem de mecânica estatística dos efeitos do estiramento mecânico na concentração intracelular de Ca2+
• Beneficiário: Yan Borges Barreto
• Modalidade de apoio: Bolsas no Brasil - Doutorado