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Tropical forest loss and geographic location drive the functional genomic diversity of an endangered palm tree

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Autor(es):
Santos, Alesandro Souza ; Cazetta, Eliana ; Faria, Deborah ; Lima, Thamara Moura ; Gomes Lopes, Maria Teresa ; Carvalho, Carolina da Silva ; Alves-Pereira, Alessandro ; Morante-Filho, Jose Carlos ; Gaiotto, Fernanda Amato
Número total de Autores: 9
Tipo de documento: Artigo Científico
Fonte: EVOLUTIONARY APPLICATIONS; v. 16, n. 7, p. 17-pg., 2023-06-15.
Resumo

Human activity has diminished forests in different terrestrial ecosystems. This is well illustrated in the Brazilian Atlantic Forest, which still hosts high levels of species richness and endemism, even with only 28% of its original extent remaining. The consequences of such forest loss in remaining populations can be investigated with several approaches, including the genomic perspective, which allows a broader understanding of how human disturbance influences the genetic variability in natural populations. In this context, our study investigated the genomic responses of Euterpe edulis Martius, an endangered palm tree, in forest remnants located in landscapes presenting different forest cover amount and composed by distinct bird assemblage that disperse its seeds. We sampled 22 areas of the Brazilian Atlantic Forest in four regions using SNP markers inserted into transcribed regions of the genome of E. edulis, distinguishing neutral loci from those putatively under natural selection (outlier). We demonstrate that populations show patterns of structure and genetic variability that differ between regions, as a possible reflection of deforestation and biogeographic histories. Deforested landscapes still maintain high neutral genetic diversity due to gene flow over short distances. Overall, we not only support previous evidence with microsatellite markers, but also show that deforestation can influence the genetic variability outlier, in the scenario of selective pressures imposed by these stressful environments. Based on our findings, we suggest that, to protect genetic diversity in the long term, it is necessary to reforest and enrich deforested areas, using seeds from populations in the same management target region. (AU)

Processo FAPESP: 18/00036-9 - Recursos genômicos de mandioca (Manihot esculenta) visando o estudo da evolução de variedades cultivadas e a busca de genes importantes para o melhoramento
Beneficiário:Alessandro Alves Pereira
Modalidade de apoio: Bolsas no Brasil - Pós-Doutorado
Processo FAPESP: 14/01029-5 - Efeitos ecológicos e genéticos da variação do tamanho das sementes em paisagem defaunada
Beneficiário:Carolina da Silva Carvalho
Modalidade de apoio: Bolsas no Brasil - Doutorado