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(Referência obtida automaticamente do Web of Science, por meio da informação sobre o financiamento pela FAPESP e o número do processo correspondente, incluída na publicação pelos autores.)

Genetic diversity of the HLA-G coding region in Amerindian populations from the Brazilian Amazon: a possible role of natural selection

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Autor(es):
Mendes-Junior, C. T. [1] ; Castelli, E. C. [2] ; Meyer, D. [3] ; Simoes, A. L. [4] ; Donadi, E. A. [5]
Número total de Autores: 5
Afiliação do(s) autor(es):
[1] Univ Sao Paulo, Dept Quim, Fac Filosofia Ciencias & Letras Ribeirao Preto, BR-14040901 Ribeirao Preto - Brazil
[2] Univ Estadual Paulista, Dept Patol, Fac Med Botucatu, Botucatu, SP - Brazil
[3] Univ Sao Paulo, Dept Genet & Biol Evolut, Inst Biociencias, Sao Paulo - Brazil
[4] Univ Sao Paulo, Dept Genet, Fac Med Ribeirao Preto, BR-14040901 Ribeirao Preto - Brazil
[5] Univ Sao Paulo, Div Imunol Clin, Dept Clin Med, Fac Med Ribeirao Preto, BR-14040901 Ribeirao Preto - Brazil
Número total de Afiliações: 5
Tipo de documento: Artigo Científico
Fonte: Genes and Immunity; v. 14, n. 8, p. 518-526, DEC 2013.
Citações Web of Science: 10
Resumo

HLA-G has an important role in the modulation of the maternal immune system during pregnancy, and evidence that balancing selection acts in the promoter and 3'UTR regions has been previously reported. To determine whether selection acts on the HLA-G coding region in the Amazon Rainforest, exons 2, 3 and 4 were analyzed in a sample of 142 Amerindians from nine villages of five isolated tribes that inhabit the Central Amazon. Six previously described single-nucleotide polymorphisms (SNPs) were identified and the Expectation-Maximization (EM) and PHASE algorithms were used to computationally reconstruct SNP haplotypes (HLA-G alleles). A new HLA-G allele, which originated in Amerindian populations by a crossing-over event between two widespread HLA-G alleles, was identified in 18 individuals. Neutrality tests evidenced that natural selection has a complex part in the HLA-G coding region. Although balancing selection is the type of selection that shapes variability at a local level (Native American populations), we have also shown that purifying selection may occur on a worldwide scale. Moreover, the balancing selection does not seem to act on the coding region as strongly as it acts on the flanking regulatory regions, and such coding signature may actually reflect a hitchhiking effect. (AU)

Processo FAPESP: 07/58391-4 - Diversidade genética do gene HLA G em populações indígenas brasileiras
Beneficiário:Celso Teixeira Mendes Junior
Modalidade de apoio: Bolsas no Brasil - Pós-Doutorado
Processo FAPESP: 13/19382-0 - Genetic diversity of the HLA-G coding region in Amerindian populations from the Brazilian Amazon: a possible role of natural selection
Beneficiário:Celso Teixeira Mendes Junior
Modalidade de apoio: Auxílio à Pesquisa - Publicações científicas - Artigo
Processo FAPESP: 07/58420-4 - Polimorfismos da região promotora e expressão de HLA-G em pacientes com histórico de carcinoma de células transicionais da bexiga urinária
Beneficiário:Erick da Cruz Castelli
Modalidade de apoio: Bolsas no Brasil - Pós-Doutorado