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(Referência obtida automaticamente do Web of Science, por meio da informação sobre o financiamento pela FAPESP e o número do processo correspondente, incluída na publicação pelos autores.)

Analysis of differentially expressed genes in colorectal adenocarcinoma with versus without metastasis by three-dimensional oligonucleotide microarray

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Autor(es):
Moura Franco, Rita M. A. M. [1] ; Linhares, Marcelo M. [1] ; Lustosa, Suzana S. [1] ; Silva, Ismael D. G. C. [1] ; Souza, Naiara C. N. [2] ; Matos, Delcio [1]
Número total de Autores: 6
Afiliação do(s) autor(es):
[1] Univ Fed Sao Paulo, UNIFESP, Escola Paulista Med, EPM, BR-04288150 Sao Paulo - Brazil
[2] Piu XII Fdn, Barretos Canc Hosp, Sao Paulo - Brazil
Número total de Afiliações: 2
Tipo de documento: Artigo Científico
Fonte: INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL PATHOLOGY; v. 7, n. 1, p. 255+, 2014.
Citações Web of Science: 4
Resumo

Background: Our objective was to examine how the gene expression profile of tumor tissue correlates with lymph node metastasis in patients with advanced colorectal adenocarcinoma (CRAC). Methods: We studied 36 patients (20 men and 16 women, 22-90 years of age) treated for CRAC (classifications of T2, T3, or T4; histological grade of G1 or G2). Amplified tumor mRNA samples were exposed to 20,000 human sequence probes and digitized images of the hybridized samples were analyzed. Results: On average, 2389 probes were detected above the background, with an average correlation R value of 0.19 between data from different patient groups (with or without lymph node invasion, colon or rectal, with or without angio-lymphatic invasion, with or without recurrence). Lymph node metastasis had a statistically significant signature according to Significance Analysis of Microarrays (SAM) and parametric t-tests, with a false discovery rate (FDR) = 0.1% and p = 0.001, respectively. Cross-correlation of these two tests identified 102 transcripts as being potentially related to node metastases, with fold changes in the range of 2.182-12.960. Conclusion: We identified 102 differentially expressed genes related to the presence of lymph node metastases in patients with advanced colorectal cancer. (AU)

Processo FAPESP: 04/10701-7 - Analise individual do perfil de expressao genica em doentes com adenocarcinoma colorretal, pela tecnica de microarrays tridimensionais de oligonucleotideos.
Beneficiário:Delcio Matos
Modalidade de apoio: Auxílio à Pesquisa - Regular