Integrating tools and disciplines to understand the future of Southwestern Atlantic shallow-water corals in a changing planet

• Grant number: 21/06866-6
• Support Opportunities: Research Grants - Young Investigators Grants - Phase 2
• Start date: August 01, 2022
• End date: July 31, 2027
• Field of knowledge: Physical Sciences and Mathematics - Oceanography - Biological Oceanography
• Principal Investigator: Marcelo Visentini Kitahara
• Grantee: Marcelo Visentini Kitahara
• Host Institution: Centro de Biologia Marinha (CEBIMAR). Universidade de São Paulo (USP). São Sebastião , SP, Brazil
• Associated researchers: Aline Aparecida Zanotti ; Amana Guedes Garrido ; Bruna Louise Pereira Luz ; Carla Zilberberg ; Cristiane Cassiolato Pires Hardoim ; David John Miller ; Douglas Francisco Marcolino Gherardi ; Guilherme Ortigara Longo ; Hudson Tercio Pinheiro ; Ira Cooke ; Jaroslaw Stolarski ; Joseph Stewart ; Kátia Cristina Cruz Capel ; Laura Frances Robinson ; Linda Gwen Waters ; Miguel Mies ; Ronaldo Bastos Francini Filho ; Samuel Coelho de Faria
• Associated research grant: 14/01332-0 - Phylogenomics of the order Scleractinia (Cnidaria, Anthozoa): relationships between evolution and climate change, AP.PFPMCG.JP
• Associated research grant(s): 23/14009-1 - Genetic connectivity and diversity of the coral Siderastrea stellata along the Brazilian coast and oceanic islands, AV.BR
• Associated scholarship(s): 24/10877-1 - Connectivity and Population Structure of Agaricia fragilis (Scleractinia, Agariciidae) from the Brazilian Coast, BP.MS; 22/09789-5 - Coral diel rhythms under an integrative approach, BP.DR; 22/14096-9 - Connectivity and genetic diversity patterns of Southwestern Atlantic corals, BP.PD; 22/10482-1 - Community structuring, phylogeography, and ecological traits from the Brazilian scleractinian endosymbiont zooxanthellae, BP.PD

Abstract

Covering less than 0.1% of the ocean flor, warm, shallow-water coral reefs are recognized for supporting over a quarter of the worlds' marine biodiversity and also for the critical ecosystem services they provide to human kind. Nonetheless, due to the ongoing climate change and other anthropogenic challenges, about 75% of the coral reefs are considered threatened, with several already severely degraded or under phase-shift to algal dominated habitats. Even though some hope has been put forward - the extinction risk of most coral species is lower than previously thought and, as a lineage, scleractinian corals have persisted to at least four of the five great mass extinction events -, it is a common sense that coral reefs are not going to be the same for the future generations. In the Southwestern Atlantic (SWA) the panorama is not different, with stronger and more frequent ocean thermal anomalies taking its toll on coral cover. Nevertheless, although displaying low diversity (but high endemicity), corals from this region have been purported to be more resistant and even more resilient to the warming ocean effects. Such "shielding" being the result of the more nutrient rich, turbid waters that our corals are adapted. However, we know virtually nothing on the genetic structure and genetic diversity of the SWA coral populations. Overall, genetic diversity is an essential source for biodiversity, providing the raw material for evolution. When interconnected, populations tend to preserve greater genetic diversity compared to more isolated populations, which in turn are more susceptible to genetic drift effects. Thus, endeavoring to fill such gaps and, consequently, improve our understanding in how climate change has and is shaping SWA coral evolution as a lineage and as a system, the present proposal consists of consolidating an interdisciplinary research line cored on RNA/DNA deep sequencing and its usefulness at the Department of Marine Science of the Federal University of São Paulo (DCMar-UNIFESP). Overall, advances in high-throughput sequencing and SNP genotyping technologies have greatly expanded our ability to identify signatures of positive selection. Such signatures help us to delimit regions of the genome that are, or have been, functionally important, poiting towards the identification of genetic variation that contributes to phenotypic diversity and genotype selection. Examining such diversity in the light of phylogeny / phylogeography / holobiont will open horizons to explore where, when and how traits - of any nature - have changed over different time scales. Retrieved biological patterns at population and specific levels will also enable the proposition of evolutionary processes and subsequent transformations of corals in light of environment variables. Therefore, at the onset of the Decade of the Ocean, and understanding that such knowledge is essential to define efficient management and conservation strategies, the present proposal will persue long lasting questions regarding the major architects of shallow-water coral reefs in times not just of major scientific interest, but also intense public and media concern because of the uncertain fate of these ecosystems in the face of ever increasing anthropogenic challenges. (AU)

Scientific publications

(9)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

VAGA, C. F.; SEIBLITZ, I. G. L.; CAPEL, K. C. C.; KITAHARA, M., V. The mitochondrial genomes of Crispatotrochus rubescens and Crispatotrochus rugosus (Hexacorallia; Scleractinia): new insights on the phylogeny of the family Caryophylliidae. MOLECULAR BIOLOGY REPORTS, v. 49, n. 12, p. 5-pg., 2022-10-20. (14/01332-0, 21/06866-6)

QUEK, Z. B. RANDOLPH; JAIN, SUDHANSHI S.; RICHARDS, ZOE T.; ARRIGONI, ROBERTO; BENZONI, FRANCESCA; HOEKSEMA, BERT W.; CARVAJAL, JOSE I.; WILSON, NERIDA G.; BAIRD, ANDREW H.; KITAHARA, MARCELO V.; et al. A hybrid-capture approach to reconstruct the phylogeny of Scleractinia (Cnidaria: Hexacorallia). Molecular Phylogenetics and Evolution, v. 186, p. 13-pg., 2023-09-01. (21/06866-6)

MIZRAHI, DAMIAN; DUARTE, RAFAEL C.; KITAHARA, MARCELO V.; FLORES, AUGUSTO A. V.. Interactions between invaders: facilitation of boring bivalves leads to reduced adhesive strength of sun corals. CORAL REEFS, v. N/A, p. 9-pg., 2023-02-27. (21/06866-6, 19/01934-3, 17/04904-2)

CORAZZA, BEATRIZ M.; LACERDA, CARLOS H. F.; GUTH, ARTHUR Z.; MARCANCOLI, RENATA K. M.; BIANCHINI, ADALTO; CALDERON, EMILIANO N.; CAPEL, KATIA C. C.; CONCEICAO, EDMILSON; FARIA, SAMUEL C.; FRANCINI-FILHO, RONALDO B.; et al. No coral recovery three years after a major bleaching event in reefs in the Southwestern Atlantic refugium. Marine Biology, v. 171, n. 5, p. 14-pg., 2024-05-01. (22/03105-7, 21/06866-6)

VAGA, C. F.; SEIBLITZ, I. G. L.; STOLARSKI, J.; CAPEL, K. C. C.; QUATTRINI, A. M.; CAIRNS, S. D.; HUANG, D.; QUEK, R. Z. B.; KITAHARA, M. V.. 300 million years apart: the extreme case of macromorphological skeletal convergence between deltocyathids and a turbinoliid coral (Anthozoa, Scleractinia). INVERTEBRATE SYSTEMATICS, v. 38, n. 4, p. 13-pg., 2024-01-01. (14/01332-0, 21/06866-6)

MIES, MIGUEL; LONGO, GUILHERME O.; BIANCHINI, ADALTO; CALDERON, EMILIANO N.; CASTRO, CLOVIS B.; FARIA, SAMUEL C.; FRANCINI-FILHO, RONALDO B.; GUEBERT, FLAVIA M.; KITAHARA, MARCELO V.; LACERDA, CARLOS H. F.; et al. Challenges for coral restoration in Southwestern Atlantic reefs: guidelines for ethical and sustainable practices. BIODIVERSITY AND CONSERVATION, v. N/A, p. 27-pg., 2025-04-17. (21/06866-6, 22/03105-7)

MARQUES, ANTONIO C.; MIGOTTO, ALVARO E.; KITAHARA, MARCELO, V; DIAS, GUSTAVO MUNIZ; COSTA, TANIA MARCIA; OLIVEIRA, MARIANA C.. Marine and coastal biodiversity studies, 60 years of research funding from FAPESP, what we have learned and future challenges. Biota Neotropica, v. 22, p. 11-pg., 2022-01-01. (20/09406-3, 19/15628-1, 20/03171-4, 21/06866-6)

ZANOTTI, ALINE APARECIDA; CAPEL, KATIA CRISTINA CRUZ; KITAHARA, MARCELO VISENTINI. Microbial characterization of the first occurrence of White Plague disease in the endemic brain coral Mussismilia hispida at Alcatrazes Archipelago, Brazil. CORAL REEFS, v. 43, n. 3, p. 10-pg., 2024-05-01. (21/06866-6)

ZANOTTI, ALINE APARECIDA; CAPEL, KATIA CRISTINA CRUZ; ZILBERBERG, CARLA; KITAHARA, MARCELO VISENTINI. The microbiome of the main deep-water scleractinian reef-framework engineers from the Southwestern Atlantic. DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS, v. 214, p. 12-pg., 2024-12-01. (21/06866-6)