Uso da abordagem de biologia de sistemas para desenvolver um modelo de funcionamento em plantas.(fapesp-microsoft)

• Grant number: 11/52065-3
• Support Opportunities: Research Grants - Research Partnership for Technological Innovation - PITE
• Start date: October 01, 2012
• End date: March 31, 2017
• Field of knowledge: Biological Sciences - Botany - Pant Physiology
• Agreement: Microsoft Research
• Principal Investigator: Marcos Silveira Buckeridge
• Grantee: Marcos Silveira Buckeridge
• Host Institution: Instituto de Biociências (IB). Universidade de São Paulo (USP). São Paulo , SP, Brazil
• City of the host institution: São Paulo
• Partner institutions: Microsoft
• Associated research grant(s): 13/50316-4 - Impact of elevated co2 and drought on metabolism of sorghum. (fapesp-osu/2013), AP.R
• Associated scholarship(s): 13/24205-0 - DEVELOPMENT OF A BIOINFORMATIC TOOL FOR INTEGRATION OF TRANSCRIPTOMICS, PROTEOMICS AND PHYSIOLOGY USING SORGHUM AND SUGARCANE AS MODEL SYSTEMS, BP.DR

Abstract

The advance of the sciences of the global climate changes and bioenergy require deep understanding of how plants work in a changing environment. Although model and native plants have been studied from the viewpoint of their ecophysiology, biochemistry and molecular biology, these levels of organization have not been approached in an integrated way. The limitation is the enormous amounts of data produced. This proposal aims at understanding the interaction among the different organizational levels through analysis of a data set from a C4 model plant (sorghum) cultivated at elevated CO2 combined with water deficit. We intend to obtain data on the physiology, metabolism and gene expression of sorghum grown in four different conditions: 1) ambient [CO2] well watered; 2) elevated [CO2] well watered; 3) ambient [CO2] with water deficit and 4) elevated [CO2] with water deficit. Two groups of plant sciences, will interact with one group of mathematics and computing sciences to reach the following goals: 1) test and refine tools for network analysis in biology; 2) develop tools for the integration of data from different experiments: 3) develop data visualization tools; 4) attempts to extrapolate to other species. (AU)

Scientific publications

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(The scientific publications listed on this page originate from the Web of Science or SciELO databases. Their authors have cited FAPESP grant or fellowship project numbers awarded to Principal Investigators or Fellowship Recipients, whether or not they are among the authors. This information is collected automatically and retrieved directly from those bibliometric databases.)

LOCOSSELLI, GIULIANO MASELLI; BUCKERIDGE, MARCOS SILVEIRA. Dendrobiochemistry, a missing link to further understand carbon allocation during growth and decline of trees. TREES-STRUCTURE AND FUNCTION, v. 31, n. 6, p. 1745-1758, DEC 2017. (15/25511-3, 11/52065-3, 13/21728-2)

DE SOUZA, AMANDA P.; COCURON, JEAN-CHRISTOPHE; GARCIA, ANA CAROLINA; ALONSO, ANA PAULA; BUCKERIDGE, MARCOS S.. Changes in Whole-Plant Metabolism during the Grain-Filling Stage in Sorghum Grown under Elevated CO2 and Drought. Plant Physiology, v. 169, n. 3, p. 1755-1765, NOV 2015. (13/50316-4, 11/52065-3)

TAVARES, EVELINE Q. P.; BUCKERIDGE, MARCOS S.. Do plant cell walls have a code?. Plant Science, v. 241, p. 286-294, DEC 2015. (15/13479-8, 11/52065-3)

DE PINHO TAVARES, EVELINE QUEIROZ; MATTOS MARTINS, MARINA CAMARA; GRANDIS, ADRIANA; ROMIM, GRAYCE H.; PIOVEZANI, AMANDA RUSISKA; GAIARSA, JONAS WEISSMANN; BUCKERIDGE, MARCOS SILVEIRA. Newly identified miRNAs may contribute to aerenchyma formation in sugarcane roots. PLANT DIRECT, v. 4, n. 3, MAR 2020. (15/13479-8, 11/52065-3, 08/57908-6, 14/50884-5)