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Computational and theoretical developments based on ab initio methods and the Density Functional Theory

Grant number: 17/11485-6
Support Opportunities:Regular Research Grants
Duration: August 01, 2017 - July 31, 2019
Field of knowledge:Physical Sciences and Mathematics - Chemistry - Physical-Chemistry
Principal Investigator:Rogério Custodio
Grantee:Rogério Custodio
Host Institution: Instituto de Química (IQ). Universidade Estadual de Campinas (UNICAMP). Campinas , SP, Brazil

Abstract

Three numerical alternatives are presented in this research plan. The first one is the development of new procedures involving a variation of the Quantum Monte Carlo method. The second one is to expand the inclusion of pseudopotentials into composite methods and to develop the respective containing only contributions from the density functional theory. The third alternative corresponds to the development of a new alternative to solve the Hartree-Fock equations using discrete integral transform.The first part of the project will be applied in the quantum treatment of different systems, increasing progressively the level of complexity of its use, such as particles in the box of different geometries, including or not several potentials, harmonic and anharmonic oscillators of the type: quadratic, quartic, periodic, etc. at the fundamental and excited states, calculations of roto-vibrational energies and electronic structure of atoms in different electronic states and so on.The generalized use of pseudopotentials in composite methods was developed by our group and we expect to extended its application to other composite methods or their variations such as: Gn, CBS and Wn and their variations. We also intend to develop composite methods using exclusively the theory of density functional. For any of the alternatives, the application of these methods will be in the calculation of thermochemical properties of compounds containing representative elements and, later, transition metals.Finally, we intend to explore the use of stochastic methods in the solution of Hartree-Fock orbitals represented by numerical integrals. Although the three methods are technically independent, it is possible to consider the use of information among them. (AU)

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Scientific publications (37)
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
CARLOS, THAYRINE DIAS; BEZERRA, LEYDIANE BARBOSA; VIEIRA, MAYANE MARQUES; SARMENTO, RENATO ALMEIDA; PEREIRA, DOUGLAS HENRIQUE; CAVALLINI, GRASIELE SOARES. Fenton-type process using peracetic acid: Efficiency, reaction elucidations and ecotoxicity. JOURNAL OF HAZARDOUS MATERIALS, v. 403, . (13/08293-7, 17/11485-6)
SILVA, CLEUTON DE SOUZA; CUSTODIO, ROGERIO. Assessment of pK(a) Determination for Monocarboxylic Acids with an Accurate Theoretical Composite Method: G4CEP. Journal of Physical Chemistry A, v. 123, n. 38, p. 8314-8320, . (13/08293-7, 17/11485-6)
BRANDAO LEAL, PAULO VITOR; PEREIRA, DOUGLAS HENRIQUE; PAPINI, RISIA MAGRIOTIS; MAGRIOTIS, ZUY MARIA. Effect of dimethyl sulfoxide intercalation into kaolinite on etheramine adsorption: experimental and theoretical investigation. JOURNAL OF ENVIRONMENTAL CHEMICAL ENGINEERING, v. 9, n. 4, . (17/11485-6, 13/08293-7)
DOS SANTOS PEREIRA, ANNA KARLA; MANZANO, CARLOS MARROTE; NAKAHATA, DOUGLAS HIDEKI; TENORIO CLAVIJO, JUAN CARLOS; PEREIRA, DOUGLAS HENRIQUE; LUSTRI, WILTON ROGERIO; CORBI, PEDRO PAULO. Synthesis, crystal structures, DFT studies, antibacterial assays and interaction assessments with biomolecules of new platinum(ii) complexes with adamantane derivatives. NEW JOURNAL OF CHEMISTRY, v. 44, n. 27, p. 11546-11556, . (13/08293-7, 17/11485-6, 15/20882-3, 18/12590-0, 17/25995-6, 18/12062-4)
QUINTANILHA, MARIANA MAZZO; SCHIMITD, BIANCA ALVES; COSTA, ADAO MARCOS FERREIRA; NAKAHATA, DOUGLAS HIDEKI; SIMONI, DEBORAH DE ALENCAR; CLAVIJO, JUAN CARLOS TENORIO; PEREIRA, DOUGLAS HENRIQUE; MASSABNI, ANTONIO CARLOS; LUSTRI, WILTON ROGERIO; CORBI, PEDRO PAULO. A novel water-soluble platinum(II) complex with the amino acid deoxyalliin: synthesis, crystal structure, theoretical studies and investigations about its antibacterial activity. Journal of Molecular Structure, v. 1236, . (13/08293-7, 15/20882-3, 18/09860-6, 18/09856-9, 18/12590-0, 15/09833-0, 18/12062-4, 17/11485-6)
SILVA, THIAGO SOARES; CRUZ, ALLEFE BARBOSA; OLIVEIRA RODRIGUES, KARINNA GOMES; PEREIRA, DOUGLAS HENRIQUE. Brueckner Doubles variation of W1 theory (W1BD) adapted to pseudopotential: W1BDCEP theory. Journal of Molecular Modeling, v. 28, n. 9, p. 10-pg., . (13/08293-7, 17/11485-6)
CRUZ, ALLEFE BARBOSA; DE CARVALHO, RAIMUNDO FRANCISCO; SILVA, THIAGO SOARES; SARMENTO, RENATO DE ALMEIDA; CAVALLINI, GRASIELE SOARES; PEREIRA, DOUGLAS HENRIQUE. Adsorptive capacity of a g-C3N4 matrix for thiamethoxam removal: A DFT study. COMPUTATIONAL AND THEORETICAL CHEMISTRY, v. 1215, p. 7-pg., . (13/08293-7, 17/11485-6)
LIMA, DANIEL RODRIGUES; DE AGUIAR FILHO, SILVIO QUINTINO; CAMARGO DO OH, LAURA BEATRIZ; DOS SANTOS PEREIRA, ANNA KARLA; PEREIRA, DOUGLAS HENRIQUE. Theoretical study of internal rotational barriers of electrons donating and electrons withdrawing groups in aromatic compounds. HELIYON, v. 6, n. 9, p. 7-pg., . (17/11485-6, 13/08293-7)
CRUZ, ALLEFE BARBOSA; CIRIBELLI, NICOLAS NASCIMENTO; CUNHA, CAMILA LUIZA; NASCIMENTO, ISABELE RODRIGUES; HOLZBACH, JULIANA CRISTINA; PEREIRA, DOUGLAS HENRIQUE. Theoretical and experimental study of the diastereoisomers (2S) and (2R)-naringenin-6-C-beta-D-glucopyranoside obtained from Clitoria guianensis. Journal of Molecular Modeling, v. 29, n. 3, p. 9-pg., . (13/08293-7, 17/11485-6)
CHININI, GUILHERME LUIZ; CUSTODIO, ROGERIO. Systematic Convergence of the Numerical Taylor Series to the Best Standard and Its Potential Implication for the Development of Composite Methods. JOURNAL OF CHEMICAL THEORY AND COMPUTATION, v. 17, n. 4, p. 13-pg., . (13/08293-7, 17/11485-6)
DA ROCHA, NICOLA LEONE; CUSTODIO, ROGERIO. On the role of vibrational selective scaling for the calculation of enthalpies of formation using a composite method. THEORETICAL CHEMISTRY ACCOUNTS, v. 139, n. 2, . (13/08293-7, 17/11485-6)
SILVA, CLEUTON DE SOUZA; CUSTODIO, ROGERIO. Empirical corrections in the G3X and G3X(CCSD) theories combined with a compact effective pseudopotential. THEORETICAL CHEMISTRY ACCOUNTS, v. 137, n. 2, . (13/08293-7, 17/11485-6)
COSTA, GUSTAVO J.; BORIN, ANTONIO C.; CUSTODIO, ROGERIO; VIDAL, LUCIANO N.. Fully Anharmonic Vibrational Resonance Raman Spectrum of Diatomic Systems. JOURNAL OF CHEMICAL THEORY AND COMPUTATION, v. 14, n. 2, p. 843-855, . (13/08293-7, 17/11485-6)
DE AGUIAR FILHO, SILVIO QUINTINO; DOS SANTOS PEREIRA, ANNA KARLA; CAVALLINI, GRASIELE SOARES; PEREIRA, DOUGLAS HENRIQUE. Theoretical study of glyphosate adsorption potential on methylcellulose and cellulose xanthate matrices compared to activated carbon: role of biopolymers in the adsorption process. POLYMER BULLETIN, . (13/08293-7, 17/11485-6)
BIHAIN, MURIELLY FERNANDA RIBEIRO; OH, LAURA BEATRIZ CAMARGO; TEIXEIRA, KEILA CARDOSO; CAVALLINI, GRASIELE SOARES; PEREIRA, DOUGLAS HENRIQUE. Theoretical and experimental evidences for the formation of carbonate anion radical (CO3-center dot) in the atmosphere. ATMOSPHERIC POLLUTION RESEARCH, v. 14, n. 6, p. 6-pg., . (13/08293-7, 17/11485-6)
PARIS JUNIOR, JOSE ALBERTO; CAVICCHIOLI, MAURICIO; AMARAL MACHADO, RACHEL TEMPERANI; PAVAN, FERNANDO; NAKAHATA, DOUGLAS HIDEKI; CORBI, PEDRO PAULO; FERREIRA COSTA, ADAO MARCOS; PEREIRA, DOUGLAS HENRIQUE; MASSABNI, ANTONIO CARLOS. SYNTHESIS, CHARACTERIZATION, DFT MODELING AND IN VITRO ANTIMYCOBACTERIAL ACTIVITY ASSAYS OF A SILVER(I)-ISONIAZID COMPLEX. Química Nova, v. 44, n. 3, p. 278-283, . (13/08293-7, 15/20882-3, 17/11570-3, 17/11485-6, 18/12062-4)
DUTRA, FELIPE RIBEIRO; SILVA, CLEUTON DE SOUZA; CUSTODIO, ROGERIO. On the Accuracy of the Direct Method to Calculate pK(a) from Electronic Structure Calculations. Journal of Physical Chemistry A, v. 125, n. 1, p. 65-73, . (13/08293-7, 17/11485-6)
ESQUEZARO, PEDRO GONCALVES; MANZANO, CARLOS MARROTE; NAKAHATA, DOUGLAS HIDEKI; SANTOS, IGOR ANDRADE; AQUINO RUIZ, URIEL ENRIQUE; SANTIAGO, MARIANA BRENTINI; SOUZA SILVA, NAGELA BERNADELLI; GOMES MARTINS, CARLOS HENRIQUE; PEREIRA, DOUGLAS HENRIQUE; GOULART BERGAMINI, FERNANDO RODRIGUES; et al. Synthesis, spectroscopic characterization and in vitro antibacterial and antiviral activities of novel silver(I) complexes with mafenide and ethyl-mafenide. Journal of Molecular Structure, v. 1246, . (18/12062-4, 17/25995-6, 17/11485-6, 13/08293-7)
DOUGLAS H. NAKAHATA; CARLOS E. S. P. CORSINO; GUILHERME C. DE MORAIS; GABRIELE M. PEREIRA; ÁLLEFE B. CRUZ; DOUGLAS HENRIQUE PEREIRA; NATASHA M. CASSANI; URIEL ENRIQUE A. RUIZ; IGOR A. SANTOS; ANA CAROLINA G. JARDIM; et al. Synthesis, Characterization and in vitro Evaluation of 4-(2-Aminoethyl)benzenesulfonamide Schiff Bases against Arboviruses. Journal of the Brazilian Chemical Society, v. 35, n. 11, . (13/08293-7, 17/11485-6, 15/20882-3, 21/10265-8)
LEAL, REGIS CASIMIRO; PEREIRA, DOUGLAS HENRIQUE; CUSTODIO, ROGERIO. An energetic analysis of the Diels-Alder endo:exo selectivity reaction by using composite methods. COMPUTATIONAL AND THEORETICAL CHEMISTRY, v. 1123, p. 161-168, . (13/08293-7, 17/11485-6)
CALDEIRA, MARIANA TORETTI; CUSTODIO, ROGERIO. Partial combination of composite strategy and the B3LYP functional for the calculation of enthalpies of formation. Journal of Molecular Modeling, v. 25, n. 3, . (13/08293-7, 17/11485-6)
CHININI, GUILHERME LUIZ; CUSTODIO, ROGERIO. Assessment of a composite method based on selected density functional theory methods and complete basis set extrapolation formulas. International Journal of Quantum Chemistry, v. 119, n. 10, . (13/08293-7, 17/11485-6)
DE MORAIS, GUILHERME DE SOUZA TAVARES; CUSTODIO, ROGERIO. Assessment of a numeric variational method for the solution of confined multielectron atoms. Journal of Molecular Modeling, v. 27, n. 7, . (13/08293-7, 17/11485-6)
DE AGUIAR FILHO, SILVIO QUINTINO; FERREIRA COSTA, ADAO MARCOS; DOS SANTOS PEREIRA, ANNA KARLA; CAVALLINI, GRASIELE SOARES; PEREIRA, DOUGLAS HENRIQUE. Interaction of glyphosate in matrices of cellulose and diethylaminoethyl cellulose biopolymers: theoretical viewpoint of the adsorption process. Journal of Molecular Modeling, v. 27, n. 9, . (13/08293-7, 17/11485-6)
DA SILVA, WESLEY PEREIRA; CARLOS, THAYRINE DIAS; CAVALLINI, GRASIELE SOARES; PEREIRA, DOUGLAS HENRIQUE. Peracetic acid: Structural elucidation for applications in wastewater treatment. WATER RESEARCH, v. 168, . (13/08293-7, 17/11485-6)
REIS, DAVI TEXEIRA; DE AGUIAR FILHO, SILVIO QUINTINO; LOPES GROTTO, CARLOS GUILHERME; RIBEIRO BIHAIN, MURIELLY FERNANDA; PEREIRA, DOUGLAS HENRIQUE. Carboxymethylcellulose and cellulose xanthate matrices as potential adsorbent material for potentially toxic Cr3+, Cu2+ and Cd(2+)metal ions: a theoretical study. THEORETICAL CHEMISTRY ACCOUNTS, v. 139, n. 6, . (13/08293-7, 17/11485-6)
CUSTODIO, ROGERIO; TAVARES DE MORAIS, GUILHERME DE SOUZA; RODRIGUES, MAURICIO GUSTAVO. A grid-based variational method to the solution of the Schrodinger equation: the q-exponential and the near Hartree-Fock results for the ground state atomic energies. Journal of Molecular Modeling, v. 24, n. 7, . (13/08293-7, 17/11485-6)
LOPES GROTTO, CARLOS GUILHERME; GOMES COLARES, CARLA JOVANIA; LIMA, DANIEL RODRIGUES; PEREIRA, DOUGLAS HENRIQUE; DO VALE, AILTON TEIXEIRA. Energy potential of biomass from two types of genetically improved rice husks in Brazil: A theoretical-experimental study. BIOMASS & BIOENERGY, v. 142, . (13/08293-7, 17/11485-6)
FERREIRA COSTA, ADAO MARCOS; SILVA, THIAGO SOARES; CAMARGO OH, LAURA BEATRIZ; PEREIRA, DOUGLAS HENRIQUE. Interaction of Fe2+, Co2+, Ni2+, Cu2+, Zn2+, Pb2+, and Cr3+ metal ions on B12N12 fullerene-like cages: a theoretical study. MONATSHEFTE FUR CHEMIE, v. 152, n. 8, . (13/08293-7, 17/11485-6)
DE AGUIAR FILHO, SILVIO QUINTINO; FERREIRA COSTA, ADAO MARCOS; SANTOS RIBEIRO, IGOR HERNANDES; CUSTODIO, ROGERIO; PEREIRA, DOUGLAS HENRIQUE. Theoretical study of the internal rotational barriers of fluorine, chlorine, bromine, and iodine-substituted ethanes. COMPUTATIONAL AND THEORETICAL CHEMISTRY, v. 1166, . (13/08293-7, 17/11485-6)
PORTO BARROS, MAYRE MANNY; COSTA ALMEIDA, KARLA JACKELINE; SOUSA CONCEICAO, MARCUS VINICIUS; PEREIRA, DOUGLAS HENRIQUE; BOTELHO, GLEICE. Photodegradation of bisphenol A by ZnS combined with H2O2: Evaluation of photocatalytic activity, reaction parameters, and DFT calculations. JOURNAL OF MOLECULAR LIQUIDS, v. 371, p. 12-pg., . (17/11485-6, 13/08293-7)
NOGUEIRA DAS NEVES, ANA PAULA; CARLOS, THAYRINE DIAS; BEZERRA, LEYDIANE BARBOSA; ALCENO, WHISLEY DURAES; SARMENTO, RENATO ALMEIDA; GONCALVES DIAS DE SOUZA, NELSON LUIS; PEREIRA, DOUGLAS HENRIQUE; CAVALLINI, GRASIELE SOARES. Carbonate anion photolyzed by solar radiation or combined with peracetic acid to form reactive species for dye degradation. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY A-CHEMISTRY, v. 420, . (17/11485-6, 13/08293-7)
BEZERRA, LEYDIANE BARBOSA; CARLOS, THAYRINE DIAS; NOGUEIRA DAS NEVES, ANA PAULA; DURAES, WHISLEY ALCENO; SARMENTO, RENATO DE ALMEIDA; PEREIRA, DOUGLAS HENRIQUE; CAVALLINI, GRASIELE SOARES. Theoretical-experimental study of the advanced oxidative process using peracetic acid and solar radiation: Removal efficiency and thermodynamic elucidation of radical formation processes. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY A-CHEMISTRY, v. 423, . (17/11485-6, 13/08293-7)
SANTOS, THIFANY JUSTO; PAGGIARO, JULIANA; CABRAL SILVA PIMENTEL, HELHE DAIANY; DOS SANTOS PEREIRA, ANNA KARLA; CAVALLINI, GRASIELE SOARES; PEREIRA, DOUGLAS HENRIQUE. Computational study of the interaction of heavy metal ions, Cd(II), Hg(II), and Pb(II) on lignin matrices. JOURNAL OF MOLECULAR GRAPHICS & MODELLING, v. 111, . (17/11485-6, 13/08293-7)
FERREIRA COSTA, ADAO MARCOS; DE AGUIAR FILHO, SILVIO QUINTINO; SANTOS, THIFANY JUSTO; PEREIRA, DOUGLAS HENRIQUE. Theoretical insights about the possibility of removing Pb2+ and Hg2+ metal ions using adsorptive processes and matrices of carboxymethyl diethylaminoethyl cellulose and cellulose nitrate biopolymers. JOURNAL OF MOLECULAR LIQUIDS, v. 331, . (17/11485-6, 13/08293-7)
CRUZ, ALLEFE BARBOSA; DE BRITO, LIVIA GABRIELA; LEAL, PAULO VITOR BRANDAO; RAMOS, WELYSON TIANO DOS SANTOS; PEREIRA, DOUGLAS HENRIQUE. Intramolecular hydrogen bonds interactions in the isomers of the bilirubin molecule: DFT and QTAIM analysis. Journal of Molecular Modeling, v. 29, n. 10, p. 9-pg., . (13/08293-7, 17/11485-6)

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