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Convex graph Recoloring

Grant number: 18/04760-3
Support Opportunities:Scholarships in Brazil - Master
Start date: August 01, 2018
End date: September 30, 2019
Field of knowledge:Physical Sciences and Mathematics - Computer Science - Theory of Computation
Agreement: Coordination of Improvement of Higher Education Personnel (CAPES)
Principal Investigator:Zanoni Dias
Grantee:Ana Paula dos Santos Dantas
Host Institution: Instituto de Computação (IC). Universidade Estadual de Campinas (UNICAMP). Campinas , SP, Brazil

Abstract

Given a graph G, a set of colors C and a coloring function C that assigns a color of C to the vertices of G, we define a coloring as convex if every color class induces a connected subgraph of G. When a given coloring is not convex, we may change the color of some vertices in order to obtain a convex coloring. A Minimum Convex Recoloring finds the smallest number possible of color changes necessary to transform a coloring into a convex coloring. This problem comes from the study of phylogenetic trees, in which convexity indicates that there were no convergences or reversions during the evolution of a species. Besides biology applications, the problem applies to computer networks with minor changes. In this project, we study the problem applied to trees and general graphs. We will develop algorithms with the meta-heuristics GRASP and mathematical models for the problem versions studied. Lastly, we will create experiments comparing the performance of our algorithms and those presents in current literature. (AU)

News published in Agência FAPESP Newsletter about the scholarship:
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Scientific publications
(The scientific publications listed on this page originate from the Web of Science or SciELO databases. Their authors have cited FAPESP grant or fellowship project numbers awarded to Principal Investigators or Fellowship Recipients, whether or not they are among the authors. This information is collected automatically and retrieved directly from those bibliometric databases.)
DANTAS, ANA PAULA S.; DE SOUZA, CID C.; DIAS, ZANONI. A heuristic for the convex recoloring problem in graphs. International Transactions in Operational Research, v. 29, n. 3, p. 1454-1478, . (17/16246-0, 17/12646-3, 15/11937-9, 18/04760-3)
DANTAS, ANA PAULA S.; DE SOUZA, CID C.; DIAS, ZANONI. A heuristic for the convex recoloring problem in graphs. International Transactions in Operational Research, . (15/11937-9, 17/12646-3, 18/04760-3, 17/16246-0)
DOS SANTOS DANTASA, ANA PAULA; DE SOUZAA, CID CARVALHO; DIAS, ZANONI. A GRASP for the Convex Recoloring Problem in Graphs. ELECTRONIC NOTES IN THEORETICAL COMPUTER SCIENCE, v. 346, p. 13-pg., . (17/12646-3, 18/04760-3, 15/11937-9, 13/08293-7, 17/16246-0)
Academic Publications
(References retrieved automatically from State of São Paulo Research Institutions)
DANTAS, Ana Paula dos Santos. Convex graph recoloring. 2019. Master's Dissertation - Universidade Estadual de Campinas (UNICAMP). Instituto de Computação Campinas, SP.