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| Author(s): |
Naiara Utimura Torres
Total Authors: 1
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| Document type: | Master's Dissertation |
| Press: | São Carlos. |
| Institution: | Universidade de São Paulo (USP). Instituto de Física de São Carlos (IFSC/BT) |
| Defense date: | 2016-01-20 |
| Examining board members: |
Marcos Vicente de Albuquerque Salles Navarro;
Lisandra Marques Gava Borges;
Frederico José Gueiros Filho
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| Advisor: | Marcos Vicente de Albuquerque Salles Navarro |
| Abstract | |
In the last years, a cellular lifestyle has been in the spotlight in the scientific world: the biofilm. Biofilm is a cellular community in which cells are attached to a substrate and surrounded by a biopolymeric matrix. Bacteria in a biofilm lifestyle has some altered characteristics, as a higher antibiotics tolerance and facility in resistance genes exchange, turning them into a big problem in medical and industrial fields. The human pathogen Pseudomonas aeruginosa is a gram-negative bacterium which causes infections associated to patients with an impaired immune system, as frequently found in patients with cystic fibrosis. Moreover, P. aeruginosa is a model organism in biofilm formation studies, producing three distinct types of exopolysaccharides: alginate, PSL and PEL. Since there is few information about PEL polysaccharide, the strain PA14 has been broadly studied because this is the unique strain in which PEL is the main polymer that gives stability of the polysaccharide matrix. In the process of PEL production and exportation, seven proteins are required: Pel(A-G). Computational predictions and comparison with other similar exopolysaccharides biosynthetic complexes led to a model of molecular complex of Pel proteins, though some proteins do not have a clear role in the PEL synthesis process. In this context, the work aimed to study the proteins related to PEL synthesis for a better understanding of the mechanism of production and exportation of this polysaccharide, focusing on the glycosyltransferase PelF and the investigation of its possible interaction with PelD, the regulatory protein of the polysaccharide production, and PelG, the putative inner membrane transporter. Several interaction assays were performed with PelF, PelG and soluble constructs of PelD using size exclusion chromatography, crosslinking and pull-down. No interaction was detected, showing that membrane fractions of PelD or other interaction partners can be required to the inner membrane complex of synthesis and export of PEL. Additionally, site-directed mutants of PelD in P. aeruginosa PA14 were constructed to evaluate their biofilm formation ability and investigate PelD activation mechanism. Mutants in regions as S-helix (residues 158-176), hydrophobic core occupied by the S-helix and residues of c-di-GMP stabilization presented a decrease of biofilm formation compared to the wild type strain. Those results allowed us to propose an activation mechanism of this important regulator of biofilm formation in P. aeruginosa never described before. (AU) | |
| FAPESP's process: | 12/25217-0 - Structural and functional studies of PelF, a glycosyl transferase responsible for extracellular matrix production in biofilms from Pseudomonas aeruginosa and Xanthomonas axonopodis |
| Grantee: | Naiara Utimura Torres |
| Support Opportunities: | Scholarships in Brazil - Master |