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Synthesis of potential artificial nucleases derived from the alkaloid (+/-)-trypargine and total synthesis of Lyngbyabellin M.

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Author(s):
Rodrigo Vezula Pirovani
Total Authors: 1
Document type: Doctoral Thesis
Press: Campinas, SP.
Institution: Universidade Estadual de Campinas (UNICAMP). Instituto de Química
Defense date:
Examining board members:
Ronaldo Aloise Pilli; Diogo Seibert Lüdtke; Alessandro Bolis Costa Simas; José Augusto Rosário Rodrigues; Paulo Cesar Muniz de Lacerda Miranda
Advisor: Ronaldo Aloise Pilli
Abstract

In chapter one, the design and synthesis of artificial nucleases based on the structure of (+/-)-trypargine (19) are introduced. These compounds which contain a guanidine group known to be involved in molecular recognition in biological systems could present the propensity to insert into DNA. Two new analogues containing an additional guanidinic group were prepared, since these may enhance the catalytic activity of these compounds. 1,2-Bisguanylated compound 20 was prepared in 8 steps in 37% overall yield. The analogous 1,9-bisguanylated 21 was synthesized in 13% global yield over 10 steps. Three more analogs 22-24 containing a hydroxylic side chain were prepared in good overall yields (55, 52 and 31%, respectively) from 4-aminoburitiric acid. The synthesis of three advanced intermediates 70d-72d with two guanidinic groups and one hydroxylic chain in 13 steps from tryptamine (31) in overall yields ranging from 9-14% is also disclosed. Despite all efforts, we were not able to find a condition to observe the catalytic activity for (+/-)-trypargine (19) and bisguanylated derivatives 20 and 21, although some supramolecular interaction was observed by 31P-NMR titration between 19 and the p-nitrophenylphosphate sodium salt, predominantly a 1:1 complex in solution. In chapter two, we have described the convergent synthesis of lyngbyabellin M (95) in order to elucidate its stereochemical nature. By retrosynthetic analysis, our target was divided into three main portions: two of them contained thiazole rings 101 and 106, which were prepared using traditional hetericyclic chemistry. The polyketide core was synthesized through the Masamune anti-aldol reaction, giving acid 107 in 19% overall yield over 6 steps. To complete the synthesis, the fragments 101, 106 and 107 were coupled in 49% yield over 6 steps. Thus, we confirmed that the natural product 95 has the stereochemistry (2S, 3S, 14R, 20S) proposed by Gerwick et al, as described in their work of isolation (AU)

FAPESP's process: 10/00336-0 - Artificial Nucleases Derived from Beta-carboline Alkaloids. Synthesis, Phosphodiester Recognition and Catalytic Activity.
Grantee:Rodrigo Vezula Pirovani
Support Opportunities: Scholarships in Brazil - Doctorate