Cloning and genetic characterization of resistance gene homologs of Brassica oleracea L. and Zea mays L.

Author(s)

Célia Correia Malvas

• Document type: Doctoral Thesis
• Press: Piracicaba.
• Institution: Universidade de São Paulo (USP). Escola Superior de Agricultura Luiz de Queiroz (ESALA/BC)
• Defense date: 2003-03-21

Examining board members

Luis Eduardo Aranha Camargo; Edson Luiz Furtado; Mirian Perez Maluf; Nelson Sidnei Massola Júnior

• Advisor: Luis Eduardo Aranha Camargo

Abstract

The aim of this work was to identify homologs of resistance genes in Brassica oleracea and Zea mays by PCR amplification using primers based on conserved domains of plant resistance genes. In B. oleracea, the primers were based on the sequence of a homolog of the Arabidopsis thaliana RPS2 gene previously described in B. oleracea. A 2.5 Kb fragment was amplified on two lines. These fragments showed length polymorphisms between lines, based on which a molecular marker was developed. This marker was used in a F2 population, derived from the crossing between the inbred lines BI-16 and Lc201, and which segregates to resistance to Xanthomonas campestris pv. campestris. The marker, however, was not linked to any Xcc resistance gene. Expression analyses by RT-PCR detected the expression of these homologs on both resistant and susceptible lines with and without inoculation, indicating that the gene is constitutively expressed. In Z. mays, primers based on resistance gene homologs sequences, named Pics, and on maize ESTs homologous to disease resistance genes, were used to amplify genomic fragments on resistant and susceptible lines to Exserohilum turcicum, Colletotrichum graminicola and Phaeosphaeria maydis. A set of primers amplified a polymorphic fragment between lines resistant and susceptible to E. turcicum. This fragment was used in a segregating population, but no linkage was detected between this marker and the E. turcicum resistance gene Ht. Among the other lines, the fragments were not polymorphic. The primers based on ESTs amplified fragments on all parental lines. These fragments were digested with restriction enzymes but did not reveal any polymorphism between lines. The results indicated that the strategy of using conserved sequences is efficient to amplify disease resistance gene homologs. The polymorphism among these homologs may be used as a molecular marker, but these markers are not always linked to disease resistance genes. (AU)

• FAPESP's process: 99/00800-8 - Cloning and genetic characterization of resistance gene homologs of Zea mays and Brassica oleracea
• Grantee: Celia Correia Malvas
• Support Opportunities: Scholarships in Brazil - Doctorate