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Diversity of bacteria in seawater samples at São Sebastião Channel

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Author(s):
Bianca Caetano de Almeida
Total Authors: 1
Document type: Doctoral Thesis
Press: São Paulo.
Institution: Universidade de São Paulo (USP). Instituto de Ciências Biomédicas (ICB/SDI)
Defense date:
Examining board members:
Irma Nelly Gutierrez Rivera; Maria Helena Matte; Cristina Rossi Nakayama; Vivian Helena Pellizari; Elisabete Jose Vicente
Advisor: Irma Nelly Gutierrez Rivera
Abstract

Microbial diversity can be studied by a combination of techniques of both conventional and modern approaches for better understanding. The aim of this study was analyze marine bacteria culturable and nonculturable diversity from seawater samples collected at São Sebastião Channel during August 2005 to March 2007. Marine bacteria were quantified using Marine Agar and identified by 16S rRNA sequencing. Concentration of a-, b-, g- e s-proteobacteria group was verified through three clones library monthly (November 2006, February 2006, February 2007). The sequencing identified 87% of marine bacteria such as Vibrio sp. The FISH technique to detect higher concentration of b-proteobacteria (10.2%), compared to number total cells (DAPI) which range from 7.0 x 106 to 2.3 x 107 cells/mL. Clones library were composed of the phylum Proteobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Fusobacteria, Verrucomicrobia e Chloroflexi. (AU)