| Full text | |
| Author(s): |
Ben Abacha, Asma
;
Dos Reis, Julio Cesar
;
Mrabet, Yassine
;
Pruski, Cedric
;
Da Silveira, Marcos
Total Authors: 5
|
| Document type: | Journal article |
| Source: | JOURNAL OF BIOMEDICAL SEMANTICS; v. 7, AUG 8 2016. |
| Web of Science Citations: | 0 |
| Abstract | |
Background: The increasing number of open-access ontologies and their key role in several applications such as decision-support systems highlight the importance of their validation. Human expertise is crucial for the validation of ontologies from a domain point-of-view. However, the growing number of ontologies and their fast evolution over time make manual validation challenging. Methods: We propose a novel semi-automatic approach based on the generation of natural language (NL) questions to support the validation of ontologies and their evolution. The proposed approach includes the automatic generation, factorization and ordering of NL questions from medical ontologies. The final validation and correction is performed by submitting these questions to domain experts and automatically analyzing their feedback. We also propose a second approach for the validation of mappings impacted by ontology changes. The method exploits the context of the changes to propose correction alternatives presented as Multiple Choice Questions. Results: This research provides a question optimization strategy to maximize the validation of ontology entities with a reduced number of questions. We evaluate our approach for the validation of three medical ontologies. We also evaluate the feasibility and efficiency of our mappings validation approach in the context of ontology evolution. These experiments are performed with different versions of SNOMED-CT and ICD9. Conclusions: The obtained experimental results suggest the feasibility and adequacy of our approach to support the validation of interconnected and evolving ontologies. Results also suggest that taking into account RDFS and OWL entailment helps reducing the number of questions and validation time. The application of our approach to validate mapping evolution also shows the difficulty of adapting mapping evolution over time and highlights the importance of semi-automatic validation. (AU) | |
| FAPESP's process: | 14/14890-0 - IMEanT: methods for dealing with meanings and intentions on interactive collaborative systems |
| Grantee: | Julio Cesar dos Reis |
| Support Opportunities: | Scholarships in Brazil - Post-Doctoral |