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(Reference retrieved automatically from Web of Science through information on FAPESP grant and its corresponding number as mentioned in the publication by the authors.)

Breeding for soil-borne pathogen resistance impacts active rhizosphere microbiome of common bean

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Author(s):
Mendes, Lucas William [1, 2] ; Mendes, Rodrigo [3] ; Raaijmakers, Jos M. [1, 4] ; Tsai, Siu Mui [2]
Total Authors: 4
Affiliation:
[1] Netherlands Inst Ecol NIOO KNAW, Dept Microbial Ecol, NL-6708 PB Wageningen - Netherlands
[2] Univ Sao Paulo, Ctr Nucl Energy Agr CENA, Cell & Mol Biol Lab, BR-13416000 Piracicaba, SP - Brazil
[3] Embrapa Meio Ambiente, BR-18020000 Jaguariuna - Brazil
[4] Leiden Univ, Inst Biol, Leiden - Netherlands
Total Affiliations: 4
Document type: Journal article
Source: ISME Journal; v. 12, n. 12, p. 3038-3042, DEC 2018.
Web of Science Citations: 5
Abstract

Over the past century, plant breeding programs have substantially improved plant growth and health, but have not yet considered the potential effects on the plant microbiome. Here, we conducted metatranscriptome analysis to determine if and how breeding for resistance of common bean against the root pathogen Fusarium oxysporum (Fox) affected gene expression in the rhizobacterial community. Our data revealed that the microbiome of the Fox-resistant cultivar presented a significantly higher expression of genes associated with nutrient metabolism, motility, chemotaxis, and the biosynthesis of the antifungal compounds phenazine and colicin V. Network analysis further revealed a more complex community for Fox-resistant cultivar and indicated Paenibacillus as a keystone genus in the rhizosphere microbiome. We suggest that resistance breeding in common bean has unintentionally co-selected for plant traits that strengthen the rhizosphere microbiome network structure and enrich for specific beneficial bacterial genera that express antifungal traits involved in plant protection against infections by root pathogens. (AU)

FAPESP's process: 14/03217-3 - Rhizosphere microbiome of common bean resistant to the soil pathogen Fusarium oxysporum
Grantee:Lucas William Mendes
Support type: Scholarships in Brazil - Post-Doctorate
FAPESP's process: 15/00251-9 - Analysis of the microbiome associated to the common bean root system
Grantee:Lucas William Mendes
Support type: Scholarships abroad - Research Internship - Post-doctor