SNUFER: A software for localization and presentation of single nucleotide polymorphisms using a Clustal multiple sequence alignment output file

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Author(s):	Mansur, Marco A. B. ; Cardozo, Giovana P. ; Santos, Elaine, V ; Marins, Mozart Total Authors: 4
Document type:	Journal article
Source:	BIOINFORMATION; v. 3, n. 2, p. 2-pg., 2008-01-01.
Abstract
SNUFER is software for the automatic localization and generation of tables used for the presentation of single nucleotide polymorphisms (SNPs). A multiple sequence alignment is generated using ClustalW ran inside SNUFER using an input of a FASTA file containing the sequences to be analyzed. The ClustalW output file is then used to generate a table which displays the SNPs detected in the aligned sequences and their degree of similarity. This table can be exported to Microsoft Word, Microsoft Excel or as a single text file, permitting further editing for publication. The software was written using Delphi 7 for programming and FireBird 2.0 for sequence database management. (AU)