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Graph/Hypergraph (spectral) analysis to compare metabolic networks of pathogenic Trypanosoma sp.

Abstract

Trypanosoma is a genus, which contains two pathogenic species to human beings: Trypanosoma brucei and Trypanosoma cruzi. These two species are relevant in terms of economy, welfare, and health. The metabolism of the different stages of both pathogenic trypanosomatids has been a matter of study not only because of their relevance for the economy and human health, but also because of their intrinsic biological interest. Several works reported how the central metabolic pathways work in these parasites. Also, based on omics analysis, a more general picture has been built in the last decade. However, attempts to approach the complexity of the metabolism of T. cruzi and T. brucei are still scarce. Thus, we propose combining graph theory-based algorithms and statistics to answer two relevant questions of parasitism. (i) Are metabolic networks more complex and interconnected in the insect stages than the mammalian stages? (ii) For each kind of host (insects or mammals), are the metabolic networks of these parasites significantly different in terms of complexity and connectivity among their subnetworks? The answers to these questions will bring invaluable biological information in terms of metabolic adaptations of these parasites to the environments they colonize in their hosts. Also, it will contribute to identifying frequent metabolic bottlenecks essential to propose new metabolic drugs targets for treating the infections they cause. (AU)

Articles published in Agência FAPESP Newsletter about the research grant:
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VEICULO: TITULO (DATA)
VEICULO: TITULO (DATA)

Scientific publications
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
GUZMAN, GROVER E. C.; STADLER, PETER F.; FUJITA, ANDRE. Efficient eigenvalue counts for tree-like networks. JOURNAL OF COMPLEX NETWORKS, v. 10, n. 5, p. 15-pg., . (20/08343-8, 19/22845-9, 18/21934-5)
SANTOS, SUZANA DE SIQUEIRA; FUJITA, ANDRE; MATIAS, CATHERINE. Spectral density of random graphs: convergence properties and application in model fitting. JOURNAL OF COMPLEX NETWORKS, v. 9, n. 6, p. 27-pg., . (18/21934-5, 19/22845-9, 17/12074-0, 20/08343-8, 15/21162-4)
RAMOS, TAIANE COELHO; MOURAO-MIRANDA, JANAINA; FUJITA, ANDRE. Spectral density-based clustering algorithms for complex networks. FRONTIERS IN NEUROSCIENCE, v. 17, p. 14-pg., . (20/08343-8, 18/21934-5, 19/22845-9)