Microbial consortia for biowaste management: life cycle analysis of novel strategies of bioconversion (MICROWASTE)

• Grant number: 13/50353-7
• Support Opportunities: Program for Research on Bioenergy (BIOEN) - Regular Program Grants
• Start date: February 01, 2014
• End date: January 31, 2018
• Field of knowledge: Biological Sciences - Microbiology - Applied Microbiology
• Agreement: Netherlands Organisation for Scientific Research (NWO)
• Principal Investigator: Fernando Dini Andreote
• Grantee: Fernando Dini Andreote
• Principal researcher abroad: Joana Falcão Salles
• Institution abroad: University of Groningen, Netherlands
• Host Institution: Escola Superior de Agricultura Luiz de Queiroz (ESALQ). Universidade de São Paulo (USP). Piracicaba , SP, Brazil

Abstract

Biological waste from agricultural and other sources is a both nuisance and a source of biotechnological opportunities. The Project MICROWASTE will develop and foster the understanding of microbial consortia involved in the degradation of the lignocellulosic matter present in agricultural biowaste (sugarcane remains [BR] and maize stalks [NL]). The two research groups have long track records of collaboration and are pioneers in the application of cultivation-independent tools to unravel the soil microbiota in terms of phylogeny and function. Moreover, they also pioneered studies on the interactions between bacteria and fungi in soils and biowaste processing. The current proposallinks the activities at the NL partner, which address the key microorganisms of biodegradative consortia and their interactions, as well soil indicators of ecosystem services, with those in BR, which address the soil microbial communities in agricultural and natural ecosystems. Together, we will focus on interactions of key players in microbial consortia and their enzymes (e.g. cellulases, laccases, etc.), next to their interactions. We will take a metagenomics approach, which will be combined with network analysis to pinpoint interactive species and key (novel) genes. These approaches will be also used to predict substrate degradability in soils, either with or without an added microbial consortium. Finally, the effect of consortia inoculation on ecosystem services will be assessed. The final outcome of the project will be (1) the availability of a stable microbial consortium which is robust due to its interactivity, with great potential to be applied for monomer production in reactors and in the field, (2) the assessment of the ecological gains of applying biowaste as opposed to the traditional way of burning or disposing it in soil, and (3) the prediction of the effects of biowaste incorporation on the soil processes. (AU)

Scientific publications

(9)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

RIGOTTO, A.; COTTA, S. R.; DIAS, A. C. F.; CARVALHO, J. L. N.; ANDREOTE, F. D.. Shifting abundances of communities associated with nitrogen cycling in soils promoted by sugarcane harvest systems. Letters in Applied Microbiology, JUL 2020. (18/24049-2, 13/50353-7)

LOPES, LUCAS DANTAS; PEREIRA E SILVA, MICHELE DE C.; WEISBERG, ALEXANDRA J.; DAVIS, EDWARD W.; YAN, QING; VARIZE, CAMILA DE S.; WU, CHIH-FENG; CHANG, JEFF H.; LOPER, JOYCE E.; ANDREOTE, FERNANDO D.. Genome variations between rhizosphere and bulk soil ecotypes of a Pseudomonas koreensis population. ENVIRONMENTAL MICROBIOLOGY, v. 20, n. 12, SI, p. 4401-4414, DEC 2018. (13/50353-7)

DA COSTA, DIOGO P.; DIAS, ARMANDO C. F.; COTTA, SIMONE R.; VILELA, DANIELLA; DE ANDRADE, PEDRO A. M.; PELLIZARI, VIVIAN H.; ANDREOTE, FERNANDO DINI. Changes of bacterial communities in the rhizosphere of sugarcane under elevated concentration of atmospheric CO2. Global Change Biology Bioenergy, v. 10, n. 2, p. 137-145, FEB 2018. (11/04857-8, 13/50353-7, 12/14534-4, 11/07343-5)

LOPES, LUCAS DANTAS; DAVIS, II, EDWARD W.; PEREIRA E SILVA, MICHELE DE C.; WEISBERG, ALEXANDRA J.; BRESCIANI, LUANA; CHANG, JEFF H.; LOPER, JOYCE E.; ANDREOTE, FERNANDO D.. Tropical soils are a reservoir for fluorescent Pseudomonas spp. biodiversity. ENVIRONMENTAL MICROBIOLOGY, v. 20, n. 1, p. 62-74, JAN 2018. (13/50353-7)

ANDREOTE, FERNANDO DINI; PEREIRA E SILVA, MICHELE DE CASSIA. Microbial communities associated with plants: learning from nature to apply it in agriculture. Current Opinion in Microbiology, v. 37, p. 29-34, JUN 2017. (14/50320-4, 13/50353-7, 13/50228-8)

LOPES, LUCAS D.; PEREIRA E SILVA, MICHELE DE CASSIA; ANDREOTE, FERNANDO D.. Bacterial Abilities and Adaptation Toward the Rhizosphere Colonization. FRONTIERS IN MICROBIOLOGY, v. 7, AUG 25 2016. (13/50353-7)

LOPES, LUCAS DANTAS; WEISBERG, ALEXANDRA J.; DAVIS, II, EDWARD W.; VARIZE, CAMILA DE S.; PEREIRA E SILVA, MICHELE DE C.; CHANG, JEFF H.; LOPER, JOYCE E.; ANDREOTE, FERNANDO D.. Genomic and metabolic differences between Pseudomonas putida populations inhabiting sugarcane rhizosphere or bulk soil. PLoS One, v. 14, n. 10, OCT 3 2019. (13/50353-7)

LOPES, LUCAS DANTAS; PEREIRA E SILVA, MICHELE DE C.; WEISBERG, ALEXANDRA J.; DAVIS, EDWARD W.; YAN, QING; VARIZE, CAMILA DE S.; WU, CHIH-FENG; CHANG, JEFF H.; LOPER, JOYCE E.; ANDREOTE, FERNANDO D.. Genome variations between rhizosphere and bulk soil ecotypes of a Pseudomonas koreensis population. ENVIRONMENTAL MICROBIOLOGY, v. 20, n. 12, p. 14-pg., 2018-12-01. (13/50353-7)

RIGOTTO, A.; COTTA, S. R.; DIAS, A. C. F.; CARVALHO, J. L. N.; ANDREOTE, F. D.. Shifting abundances of communities associated with nitrogen cycling in soils promoted by sugarcane harvest systems. Letters in Applied Microbiology, v. 71, n. 5, p. 7-pg., 2020-07-29. (18/24049-2, 13/50353-7)