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Development of a pipeline for continuous improvement of monoclonal antibodies for therapeutic use in diseases caused by influenza and SARS-CoV-2.

Grant number: 23/11920-5
Support Opportunities:Scholarships in Brazil - Post-Doctoral
Start date: October 01, 2023
End date: September 30, 2026
Field of knowledge:Interdisciplinary Subjects
Principal Investigator:Maria Carolina Quartim Barbosa Elias Sabbaga
Grantee:Vinicius Carius de Souza
Host Institution: Instituto Butantan. Secretaria da Saúde (São Paulo - Estado). São Paulo , SP, Brazil
Associated research grant:21/11944-6 - Continuous improvement of vaccines: Center for Viral Surveillance and Serological Assessment (CeVIVAS), AP.CCD

Abstract

Viral diseases pose a continuous challenge to global public health. The CeVIVAS project has been conducting ongoing genomic surveillance of circulating Influenza and SARS-CoV-2 viruses in the State of São Paulo, the country, and neighboring countries. The data allows us to trace the evolutionary history of these viruses, understand viral variants, and assess the protective capacity of available vaccines for the population. The integration of experimental science with computational tools represents an innovative approach for addressing viral diseases. The comprehension of molecular interactions between antibodies and viruses, coupled with the utilization of computational methods, provides a promising outlook for the development of more effective and accessible therapies in the field of viral immunotherapy, making significant contributions to global public health. Monoclonal antibodies have emerged as a potent therapeutic strategy, with scFv/Fab antibody fragments gaining prominence due to their high specificity and versatility. In this context, the current study aims to employ computational methods to (i) identify human-produced Complementarity-Determining Regions (CDRs) in response to viral infection/vaccination; (ii) assess the interaction of identified CDRs with the structures of antigenic proteins from circulating viral strains (detected through genomic surveillance established in the CeVIVAS project); (iii) predict and structurally optimize scFv/Fab antibodies based on data obtained from objectives (i) and (ii), with the goal of advancing the treatment of diseases caused by the viruses under study in the project.

News published in Agência FAPESP Newsletter about the scholarship:
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Scientific publications
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
BRCKO, ISABELA CARVALHO; DE SOUZA, VINICIUS CARIUS; RIBEIRO, GABRIELA; LIMA, ALEX RANIERI JERONIMO; MARTINS, ANTONIO JORGE; BARROS, CLAUDIA RENATA DOS SANTOS; DE CARVALHO, ENEAS; PEREIRA, JAMES SIQUEIRA; DE LIMA, LOYZE PAOLA OLIVEIRA; VIALA, VINCENT LOUIS; et al. Comprehensive molecular epidemiology of influenza viruses in Brazil: insights from a nationwide analysis. VIRUS EVOLUTION, v. 11, n. 1, p. 17-pg., . (21/11944-6, 23/07688-0, 23/11920-5)