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Proteome and antioxidant system analysis of sugarcane in response to Leifsonia xyli subsp. xyli, causal agent of ratoon stunting disease

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Author(s):
Giselle de Carvalho
Total Authors: 1
Document type: Doctoral Thesis
Press: Piracicaba.
Institution: Universidade de São Paulo (USP). Escola Superior de Agricultura Luiz de Queiroz (ESALA/BC)
Defense date:
Examining board members:
Ricardo Antunes de Azevedo; Celso Eduardo Benedetti; Luis Eduardo Aranha Camargo; Chirlei Glienke; Alessandra Alves de Souza
Advisor: Ricardo Antunes de Azevedo; Luis Eduardo Aranha Camargo
Abstract

Sugarcane is currently the most grown crop in the state of São Paulo, with great importance in the agricultural sector. Like every crop, sugarcane is host to a number of pathogens that may limit its production. The fastidious bacterium Leifsonia xyli subsp. xyli (Lxx) is the causal agent of ratoon stunting in sugarcane (RSD), which the main symptom is a sharp reduction in growth observed in adult plants, this disease is difficult to diagnose because the evolution is slow due to nature of fastidious bacteria. Lxx can be considered as an obligatory endophyte that grows at pathogen levels in plant tissues depending on biotic and abiotic stimuli. Due to the importance of culture and the damage caused by the Lxx, this work presents two main approaches: the first one was the development of a protocol for the quantification of Lxx in sugarcane tissue by quantitative real time PCR; the second one was to study the interaction between sugarcane and Leifsonia xyli subsp. xyli aiming to a better understanding of the evolution of this process, identifying alterations in abundance of proteins over time depending on the bacterial colonization in the two varieties of sugarcane (RB835486 and SP80-3280) and then, emphasizing the antioxidant system in this relationship. Thus, we developed specific primers that enabled Lxx quantification at low bacterial levels in leaf tissue. The assay showed differences among sugarcane varieties according to the kinetics of bacterial growth. Plants that presented different titers of bacteria were obtained by artificial inoculum or not were selected to proteomic analysis by 2D-DIGE technique, since for RSD, the damage is related to high colonization in plant tissues. The identification of sugarcane proteins revealed that for variety RB835486 were observed a repression of stress proteins and proteins related to primary metabolism, in contrast with SP80-3280 variety, which it was identified high abundance of proteins of oxidative stress pathway, in not inoculated plants, for both varieties. However in inoculated plants it was identified a change in the abundance of proteins related to plant growth, cell cycle, cell signaling and hormonal pathways. These results corroborate with the main symptom of the disease, ratton, and suggest that temporal changes in expression of sugarcane cited proteins by increasing title of Lxx can result in hormonal imbalance and the decrease of plant growth. The major part of biochemistry analyzes corroborate with previous data obtained in proteomic approach. The RB835486 variety showed an early response to oxidative stress and suggests a greater control of bacterial growth in its tissues, which may be related to the balance of ERO\'s in signaling metabolism in plant pathogen interaction. While the SP80-3280, showed a later induction of antioxidant enzymes, when the bacterium Lxx had the highest titer of bacteria. (AU)