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| Author(s): |
Antônio José da Costa Filho
Total Authors: 1
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| Document type: | Doctoral Thesis |
| Press: | São Carlos. |
| Institution: | Universidade de São Paulo (USP). Instituto de Física de São Carlos (IFSC/BT) |
| Defense date: | 2001-11-06 |
| Examining board members: |
Otaciro Rangel Nascimento;
Mario Engelsberg;
José Pedro Donoso Gonzalez;
Amando Siuiti Ito;
Claudio Jose Magon
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| Advisor: | Otaciro Rangel Nascimento |
| Abstract | |
In this work, EPR-CW and 2D-FT-EPR are used to study the enzyme chlorocatechol 1,2-dioxygenase and the dynamic structure of biological relevant membranes, respectively. Chlorocatechol 1,2-dioxygenase (CCD) is a non-heme Fe(lIl) enzyme that catalyses the ring cleavage of aromatic compounds like chlorocatechol. The structure stability as a function of the temperature was determined via circular dichroism and catalytic activity assays. The enzyme has its maximum activity at 20-25 ºC. The main contribution to its secondary structure comes from antiparallel Β sheets. The iron content was determined by EPR measurements, indicating the presence of one Fe(llI) per molecule. The Fe(III) ion shows a very narrow line at g=4.3 indicating a high spin state in a rhombic symmetry with λ=E/D=1/3 and D=(1,3±0,2) cm -1. The Scatchard plot based on EPR spectra suggests the existence of one site for substrate binding with a binding constant k=(2,7±0,1)x10-6 M. As for 2D-FT-EPR, the so-called modem EPR techniques, like 2D-ELDOR, were used to investigate several aspects of biologically relevant membranes. Firstly, we determined the differences between the liquid-ordered (Lo) and the liquid-crystalline (Lc) phases in model membranes of pure lipid and of lipid/cholesterol (1/1) mixtures containing different spin labels (16-PC, CSL, and DPPTC). In this case, we show how 2D-ELDOR makes possible the differentiation between Lo and Lc phases just by a pattern recognition scheme. We also performed simulations of those spectra and the results are: the Lo phase shows higher fluidity and ordering in the acyl chain region, whereas it shows lower ordering in the headgroup polar region. After that the membrane behaviour as s function of temperature was studied. We showed that cholesterol maintains the membrane in a highly ordered and fluid structure over the entire range of temperatures, abolishing the gel-Lc phase transition of the lipid DPPC. The biological membrane bleb was the first attempt to apply our methodology to real membranes. The 2D-ELDOR results for bleb membranes indicate the existence of Lo domains in the structure of those membranes. Finally, we studied the effects of the peptide Gramicidin A\' (GA) on the lipid organization of DPPC membranes. The 2D-ELDOR results show very clear two-component spectra (assigned to bulk and ,boundary lipids), which were simulated by the NLSPMC programs. This is the first time that 2D-FT-EPR multi-component spectra are simulated using both the Sc- and Secsy formal. The simulations indicate that the GA molecules do not significantly affect the bulk lipid, whereas the boundary lipids present the end portion of their acyl chain bent towards the GA molecule. This mechanism is probably responsible for the local formation of the HII phase in the membranes. (AU) | |