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Visual Analytics of environmental data collected with Passive Acoustic Monitoring

Abstract

Passive Acoustic Monitoring (PAM) has been recognized as a promising approach to biodiversity tracking by recording animal abundance and distribution, offering a non-invasive, standardized and efficient approach to collecting ecological data at large spatial and temporal scales. PAM provides unprecedented access to information about changes in the environment and in ecosystems, and can support data-intensive monitoring and conservation programs. The technology is particularly suitable for studying tropical landscapes, characterized by extreme biodiversity and visibility impaired by dense vegetation. However, its expansion is challenged by a classic big data scenario: whilst it allows collecting, with little effort, thousands of large audio files, data analysis by manual inspection quickly becomes unfeasible. The objective of this project is to develop robust computational solutions to meet some demands placed by scholars in ecology and biodiversity, related to the analysis of acoustic recordings collected through PAM. The processing of audio by machine learning techniques is inherently complex, data volumes are expressive, and the systematic processing of natural soundscapes is still relatively recent and a very challenging research topic. As recorders capture ambient sound from multiple sources, regardless of their nature, it is common for acoustic events of interest to be masked, captured faintly, or occur overlapped with other events that may or may not be of interest. As the spatial location of insects and animals varies, while the recorders remain in a fixed position, the acoustic recordings collected are naturally noisy, and occurrences of similar events show great variability. This scenario makes it extremely difficult to perform essential tasks of identifying and tagging occurrences of interest. Successful machine learning strategies in acoustic recordings obtained under more controlled conditions are not particularly effective in this scenario, which motivates the investigation proposed in this project. We will initially consider some critical tasks that are closely related, namely, the automation of the task of tagging acoustic recordings, and the development of machine learning models for the identification, retrieval and classification of events of interest in natural soundscapes. (AU)

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VEICULO: TITULO (DATA)
VEICULO: TITULO (DATA)

Scientific publications (21)
(The scientific publications listed on this page originate from the Web of Science or SciELO databases. Their authors have cited FAPESP grant or fellowship project numbers awarded to Principal Investigators or Fellowship Recipients, whether or not they are among the authors. This information is collected automatically and retrieved directly from those bibliometric databases.)
RIBEIRO-SOUZA, PAULA; HAJI, JULIO; OSHIMA, JULIA; LIMA, FERNANDO; LIMA-SILVA, BARBARA; PIRES, JOSE; RIBEIRO, MILTON; GRAIPEL, MAURICIO. Under pressure: suitable areas for neotropical cats within an under protected biodiversity hotspot. REMOTE SENSING APPLICATIONS-SOCIETY AND ENVIRONMENT, v. 34, p. 13-pg., . (21/08534-0, 21/10639-5, 21/08322-3, 21/02132-8, 21/06668-0, 20/01779-5, 21/10195-0, 13/50421-2, 22/10760-1, 14/23132-2)
ALEGRE, VANESA BEJARANO; OSHIMA, JULIA EMI DE FARIA; KANDA, CLAUDIA ZUKERAN; JORGE, MARIA LUISA S. P.; KEUROGHLIAN, ALEXINE; MORATO, RONALDO G.; RIBEIRO, MILTON CEZAR; BORGER, LUCA. Predator-Prey Movement Interactions: Jaguars and Peccaries in the Spotlight. Biotropica, v. 57, n. 1, p. 7-pg., . (13/50421-2, 19/04851-1, 21/06668-0, 16/09957-4, 20/01779-5, 18/13037-3, 22/10760-1, 20/07586-4, 21/08322-3, 21/02132-8, 21/10195-0, 14/23132-2, 16/11595-3, 21/10639-5, 21/08534-0)
ADORNO, BRUNO F. C. B.; RAMOS, RAFAEL GUIMARAES; DINIZ, MILENA FIUZA; GODOY, EDERSON; DINIS, BIANCA; CORREA, WELLINGTON; BARBOSA, VINICIUS MUNHOZ; BATISTA, GABRIELA ROSA; PIRATELLI, AUGUSTO JOAO; RIBEIRO, MILTON CEZAR; et al. When refugia vanish: Recurrent fire and resistant landscapes homogenize bird communities. FOREST ECOLOGY AND MANAGEMENT, v. 603, p. 11-pg., . (21/08322-3, 22/10760-1, 13/50421-2, 21/10639-5, 21/08534-0, 21/10195-0, 21/06668-0, 20/01779-5)
VANCINE, MAURICIO HUMBERTO; MUYLAERT, RENATA L.; NIEBUHR, BERNARDO BRANDA; OSHIMA, JULIA EMI DE FARIA; TONETTI, VINICIUS; BERNARDO, RODRIGO; DE ANGELO, CARLOS; ROSA, MARCOS REIS; GROHMANN, CARLOS HENRIQUE; RIBEIRO, MILTON CEZAR. The Atlantic Forest of South America: Spatiotemporal dynamics of the vegetation and implications for conservation. Biological Conservation, v. 291, p. 15-pg., . (21/08534-0, 21/10639-5, 21/08322-3, 21/02132-8, 13/02883-7, 20/01779-5, 17/09676-8, 21/10195-0, 13/50421-2, 22/01899-6, 22/10760-1, 14/23132-2)
BRITO-DIAS, VIVIANE; BIANCHI, RITA; MARTELLO, FELIPE; AGUIRRE-GUTIERREZ, JESUS; CERVANTES-PERALTA, FRANCISCO; RIBEIRO, MILTON CEZAR; GUILLERA-ARROITA, GURUTZETA. Temporal stability of vegetation across agricultural land uses enhances small non-volant mammal occurrence in the Brazilian Atlantic Forest. AGRICULTURE ECOSYSTEMS & ENVIRONMENT, v. 398, p. 13-pg., . (21/06668-0, 13/50421-2, 21/08322-3, 22/10760-1, 21/08534-0, 21/10195-0, 21/10639-5, 20/01779-5)
ANUNCIACAO, PAULA RIBEIRO; ERNST, RAFFAEL; MARTELLO, FELIPE; VANCINE, MAURICIO HUMBERTO; DE CARVALHO, LUIS MARCELO TAVARES; RIBEIRO, MILTON CEZAR. Climate-driven loss of taxonomic and functional richness in Brazilian Atlantic Forest anurans. PERSPECTIVES IN ECOLOGY AND CONSERVATION, v. 21, n. 4, p. 12-pg., . (21/08534-0, 21/10639-5, 21/08322-3, 20/01779-5, 13/02883-7, 17/09676-8, 21/10195-0, 13/50421-2, 22/01899-6, 22/10760-1)
ALEGRE, VANESA BEJARANO; SEPULVIDA, RAISSA; OSHIMA, JULIA EMI DE FARIA; AZEVEDO, FERNANDA CAVALCANTI; KANDA, CLAUDIA ZUKERAN; MORATO, RONALDO G.; RIBEIRO, MILTON CEZAR. Ecological traits explain wild felid responses to human-modified landscapes in Brazil: An open-data approach for conservation. Biological Conservation, v. 311, p. 12-pg., . (21/10195-0, 21/06668-0, 20/07586-4, 21/10639-5, 13/50421-2, 21/08322-3, 19/04851-1, 22/10760-1, 16/11595-3, 18/13037-3, 20/01779-5, 21/02132-8, 21/08534-0)
ADORNO, BRUNO F. C. B.; RIBEIRO, MILTON C.; HASUI, ERICA; DINIS, BIANCA; GODOY, EDERSON; COLETTI-MANZOLI, ENZO; VAZ, PEDRO G.; PIRATELLI, AUGUSTO J.. Fire size and vegetation productivity shape bird diversity across burned landscapes in the Atlantic Forest. JOURNAL OF APPLIED ECOLOGY, v. N/A, p. 13-pg., . (21/10639-5, 20/01779-5, 21/10195-0, 21/06668-0, 21/08322-3, 21/08534-0, 13/50421-2, 22/10760-1)
CASTELLANO, GABRIEL RIBEIRO; DOS SANTOS, JULIANA SILVEIRA; ZANATTA, MELINA BORGES TEIXEIRA; ALVES, RAFAEL SOUZA CRUZ; DE SOUZA, ZIGOMAR MENEZES; RIBEIRO, MILTON CESAR; MENEGARIO, AMAURI ANTONIO. Rare Earth Elements in Tropical Agricultural Soils: Assessing the Influence of Land Use, Parent Material, and Soil Properties. AGRONOMY-BASEL, v. 15, n. 7, p. 17-pg., . (21/10639-5, 20/01779-5, 21/10195-0, 21/06668-0, 21/08322-3, 21/08534-0, 13/50421-2, 19/09713-6, 22/10760-1)
CARNEIRO, LAZARO DA SILVA; RIBEIRO, MILTON CEZAR; GAGLIANONE, MARIA CRISTINA. Restoration of bee communities (Hymenoptera: Apoidea: Anthophila) in landscape scale: a review. Apidologie, v. 55, n. 4, p. 13-pg., . (21/08534-0, 21/10639-5, 21/08322-3, 20/01779-5, 21/10195-0, 13/50421-2, 22/10760-1)
GASPAR, LUCAS P.; D. A. SCARPELLI, MARINA; OLIVEIRA, ELIZIANE G.; ALVES, RAFAEL SOUZA-CRUZ; GOMES, ARTHUR MONTEIRO; WOLF, RAFAELA; FERNEDA, RAFAELA VITTI; KAMAZUKA, SILVIA HARUMI; GUSSONI, CARLOS O. A.; RIBEIRO, MILTON CEZAR. Predicting bird diversity through acoustic indices within the Atlantic Forest biodiversity hotspot. FRONTIERS IN REMOTE SENSING, v. 4, p. 14-pg., . (21/08534-0, 21/10639-5, 21/08322-3, 20/01779-5, 21/10195-0, 13/50421-2, 22/10760-1)
MORENO, DANIELE J.; RIBEIRO, MILTON C.; PIRATELLI, AUGUSTO J.. Landscape heterogeneity increases bird functional diversity within Neotropical vineyards. Biotropica, v. 56, n. 3, p. 12-pg., . (21/08534-0, 21/10639-5, 21/08322-3, 21/06668-0, 20/01779-5, 21/10195-0, 13/50421-2, 22/10760-1)
PETERSON, MICHAELA C.; BRADHAM, JENNIFER; FERRARO, KRISTY; GUILLET, MAX; KEUROGHLIAN, ALEXINE; RIBEIRO, MILTON; JORGE, MARIA LUISA S. P.. Modeling movement patterns to identify thresholds of functional connectivity in fragmented forest landscapes. Biological Conservation, v. 307, p. 10-pg., . (21/10639-5, 21/06668-0, 13/50421-2, 20/01779-5, 21/08534-0, 22/10760-1, 21/10195-0, 21/08322-3)
TEIXEIRA, JOANISON VICENTE DOS SANTOS; BONFIM, FERNANDO CESAR GONCALVES; VANCINE, MAURICIO HUMBERTO; RIBEIRO, MILTON C.; OLIVEIRA, LEONARDO DE C.. Effect of landscape attributes on the occurrence of the endangered golden-headed lion tamarin in southern Bahia, Brazil. AMERICAN JOURNAL OF PRIMATOLOGY, v. 86, n. 4, p. 15-pg., . (21/08534-0, 21/10639-5, 21/08322-3, 21/06668-0, 20/01779-5, 21/10195-0, 13/50421-2, 22/10760-1)
FERNANDES, ARON SILVAROLLI; FUZESSY, LISIEUX; GESTICH, CARLA C.; MARTELLO, FELIPE; RIBEIRO, MILTON CEZAR. Forest Cover and Altitude Are Key to the Occurrence of Black-Fronted Titi Monkeys (Callicebus nigrifrons) in the Brazilian Atlantic Forest. AMERICAN JOURNAL OF PRIMATOLOGY, v. 87, n. 9, p. 12-pg., . (23/01460-7, 21/08322-3, 21/08534-0, 21/10195-0, 21/10639-5, 13/50421-2, 22/10760-1, 17/07954-0, 20/01779-5)
CARNEIRO, LAZARO DA SILVA; RIBEIRO, MILTON CEZAR; RICKETTS, TAYLOR; MARTELLO, FELIPE; FRANTINE-SILVA, WILSON; GAGLIANONE, MARIA CRISTINA. Forest cover outweighs restoration strategy in explaining Euglossini beta diversity in the Atlantic Forest, Brazil. Biological Conservation, v. 312, p. 9-pg., . (21/08322-3, 21/08534-0, 21/10195-0, 21/10639-5, 13/50421-2, 22/10760-1, 20/01779-5)
GRAVIOLA, GABRIELA ROSA; RIBEIRO, MILTON CEZAR; PENA, JOAO CARLOS. Human Perception of Birds in Two Brazilian Cities. BIRDS, v. 5, n. 2, p. 15-pg., . (21/08534-0, 21/10639-5, 21/08322-3, 20/01779-5, 18/00107-3, 21/10195-0, 13/50421-2, 22/10760-1)
DIAS, FABIO FELIX; PONTI, MOACIR ANTONELLI; MINGHIM, ROSANE. Enhancing sound-based classification of birds and anurans with spectrogram representations and acoustic indices in neural network architectures. ECOLOGICAL INFORMATICS, v. 90, p. 12-pg., . (21/08322-3, 19/07316-0)
ALEGRE, VANESA BEJARANO; KANDA, CLAUDIA ZUKERAN; OSHIMA, JULIA EMI DE FARIA; NIEBUHR, BERNARDO BRANDA; MORATO, RONALDO GONSALVES; THOMPSON, JEFFREY J.; BORGER, LUCA; RIBEIRO, MILTON CEZAR. Jaguar at the Edge: movement patterns in human-altered landscapes. PERSPECTIVES IN ECOLOGY AND CONSERVATION, v. 22, n. 4, p. 9-pg., . (13/50421-2, 19/04851-1, 20/01779-5, 18/13037-3, 22/10760-1, 20/07586-4, 21/08322-3, 21/02132-8, 21/10195-0, 16/11595-3, 21/10639-5, 21/08534-0)