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Of epigenetics, genomic variability and gene expression regulation in Leishmania

Grant number: 23/03015-0
Support Opportunities:Research Projects - Thematic Grants
Start date: May 01, 2024
End date: April 30, 2029
Field of knowledge:Biological Sciences - Parasitology - Protozoology of Parasites
Principal Investigator:Angela Kaysel Cruz
Grantee:Angela Kaysel Cruz
Host Institution: Faculdade de Medicina de Ribeirão Preto (FMRP). Universidade de São Paulo (USP). Ribeirão Preto , SP, Brazil
Pesquisadores principais:
Luiz Ricardo Orsini Tosi
Associated research grant(s):24/10129-5 - Multiuser equipment approved in Grant2023/03015-0: citômetro de fluxo Cytoflex Base-Beckman, AP.EMU
Associated scholarship(s):25/09797-6 - Does kinase ATM participate in genome plasticity modulation in Leishmania?, BP.PD
25/05210-0 - Dual role of R-loops-associated ncRNAs in response to replicative stress and gene expression regulation in Leishmania major, BP.MS
24/18411-1 - Evaluation of ncRNA participation on R-loops formation and its role in the regulation of gene expression and host-parasite interaction in L. braziliensis, BP.PD
+ associated scholarships 24/20016-3 - Characterization and functional analysis of Lupus La protein from Leishmania braziliensis, BP.IC
24/09219-0 - ncRNAs: investigating functions and biogenesis, BP.PD
24/09300-1 - Database modeling and adaptation of bioinformatics analyses of expression regulation processes and genomic variability in Leishmania., BP.TT
24/07588-8 - Generation and phenotypic characterization of Leishmania mutants for genomic plasticity studies under replicative stress, BP.TT
24/07882-3 - Establishment of innovative approaches to study protein-protein, protein-RNA and DNA, and RNA-RNA interactions to expedite the development of WP2 and WP3, BP.TT
24/08412-0 - Does kinase ATM participate in genome plasticity modulation in Leishmania?, BP.PD
24/07364-2 - Functional characterization of Leishmania Rad1, a subunit of the 9-1-1 checkpoint complex, BP.DD - associated scholarships

Abstract

The protozoan Leishmania, etiological agent of diseases of indisputable medical importance, has peculiar forms of genome organization and expression. The aim of this proposal is to investigate key elements of genetic variability and post-transcriptional regulation of gene expression. In specific lines of investigation, we will study genome variation in response to DNA replication stress; the expression and mechanisms of action of non-coding RNAs and the role of post-translational modifications in development and host-parasite interaction. These studies will use state-of-the-art approaches in cellular and molecular biology, such as: genomic editing by CRISPR-Cas9; global analysis and/or prospecting strategies such as ChIP-seq and BioID; in-vivo RNA-RNA or RNA-protein interaction studies; and multi-color FISH assays of single molecules. The proposal has a strong component of strengthening of existing and new collaborations with international laboratories, reinforcing the vocation of our laboratories for international network collaboration. Thus, this proposal aims to contribute remarkable advances in the field of RNA expression regulation and the understanding of genomic variability in trypanosomatids. (AU)

Articles published in Agência FAPESP Newsletter about the research grant:
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Articles published in other media outlets ( ):
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VEICULO: TITULO (DATA)
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Scientific publications
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
BLACK, J. A.; POULTON, B. C.; GONZAGA, B.; ISKANTAR, A.; PAAPE, D.; TOSI, L. R. O.; MCCULLOCH, R.. AUK3 is required for faithful nuclear segregation in the bloodstream form of Trypanosoma brucei. Molecular and Biochemical Parasitology, v. 261, p. 6-pg., . (24/08412-0, 23/03015-0)