A meta-omics approach to examine disturbances in soils of the Brazilian Amazonia

• Grant number: 16/02219-8
• Support Opportunities: Scholarships in Brazil - Post-Doctoral
• Start date: September 01, 2016
• End date: June 30, 2018
• Field of knowledge: Biological Sciences - Microbiology - Applied Microbiology
• Agreement: NSF - Dimensions of Biodiversity and BIOTA
• Principal Investigator: Fernando Dini Andreote
• Grantee: Victor Satler Pylro
• Host Institution: Escola Superior de Agricultura Luiz de Queiroz (ESALQ). Universidade de São Paulo (USP). Piracicaba , SP, Brazil
• Associated research grant: 14/50320-4 - Dimensions US-BIOTA - São Paulo: collaborative research: integrating dimensions of microbial biodiversity across land use change in tropical forests, AP.BTA.TEM

Abstract

This proposal aims to use a combination of high-throughput sequencing of DNA and RNA fromenvironmental samples, together with data from culture-based approaches - genomics and physiology, togather information on microbial communities functioning in soils found in the Brazilian Amazonia. Thiscombination will constitute an effort to correlate the soil disturbances, microbial taxonomical groups andmicrobially mediated processes, with a focus on the generation and consumption of methane. (AU)

Scientific publications

(7)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

PYLRO, VICTOR SATLER; FRANCO DIAS, ARMANDO CAVALCANTE; ANDREOTE, FERNANDO DINI; MORAIS, DANIEL KUMAZAWA; VARANI, ALESSANDRO DE MELLO; FASANELLA ANDREOTE, CRISTIANE CIPOLLA; DE ALMEIDA BERNARDO, EDUARDO ROBERTO; ZUCCHI, TIAGO. Closed Genome Sequence of Phytopathogen Biocontrol Agent Bacillus velezensis Strain AGVL-005, Isolated from Soybean. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, v. 6, n. 7, FEB 2018. (14/50320-4, 16/02219-8)

MORAIS, DANIEL K.; ROESCH, LUIZ F. W.; REDMILE-GORDON, MARC; SANTOS, FAUSTO G.; BALDRIAN, PETR; ANDREOTE, FERNANDO D.; PYLRO, VICTOR S.. BTW-Bioinformatics Through Windows: an easy-to-install package to analyze marker gene data. PeerJ, v. 6, JUL 30 2018. (14/50320-4, 16/02219-8)

RODRIGUES, EDMO MONTES; MORAIS, DANIEL KUMAZAWA; PYLRO, VICTOR SATLER; REDMILE-GORDON, MARC; DE OLIVEIRA, JURACI ALVES; WURDIG ROESCH, LUIZ FERNANDO; CESAR, DIONEIA EVANGELISTA; TOTOLA, MARCOS ROGERIO. Aliphatic Hydrocarbon Enhances Phenanthrene Degradation by Autochthonous Prokaryotic Communities from a Pristine Seawater. MICROBIAL ECOLOGY, v. 75, n. 3, p. 688-700, APR 2018. (16/02219-8)

LEMOS, LEANDRO NASCIMENTO; DE SOUZA, ROSINEIDE CARDOSO; CANNAVAN, FABIANA DE SOUZA; PATRICIO, ANDRE; PYLRO, VICTOR SATLER; HANADA, ROGERIO EIJI; MUI, TSAI SIU. Metagenome sequencing of the microbial community of two Brazilian anthropogenic Amazon dark earth sites, Brazil. GENOMICS DATA, v. 10, p. 167-168, DEC 2016. (13/02760-2, 14/50320-4, 16/18215-1, 11/50914-3, 16/02219-8)

MULLER BARBOZA, ANTHONY DIEGO; PYLRO, VICTOR SATLER; SEMINOT JACQUES, RODRIGO JOSEMAR; GUBIANI, PAULO IVONIR; FERREIRA DE QUADROS, FERNANDO LUIZ; DA TRINDADE, JULIO KUHN; TRIPLETT, ERIC W.; ROESCH, LUIZ. Seasonal dynamics alter taxonomical and functional microbial profiles in Pampa biome soils under natural grasslands. PeerJ, v. 6, JUN 13 2018. (16/02219-8)

PYLRO, VICTOR SATLER; FRANCO DIAS, ARMANDO CAVALCANTE; ANDREOTE, FERNANDO DINI; MORAIS, DANIEL KUMAZAWA; VARANI, ALESSANDRO DE MELLO; FASANELLA ANDREOTE, CRISTIANE CIPOLLA; DE ALMEIDA BERNARDO, EDUARDO ROBERTO; ZUCCHI, TIAGO. Closed Genome Sequence of Phytopathogen Biocontrol Agent Bacillus velezensis Strain AGVL-005, Isolated from Soybean. GENOME ANNOUNCEMENTS, v. 6, n. 7, p. 2-pg., 2018-02-01. (14/50320-4, 16/02219-8)

ALVES, KELLY JAQUELINE; PYLRO, VICTOR SATLER; NAKAYAMA, CRISTINA ROSSI; VITAL, VITOR GONCALVES; TAKETANI, RODRIGO GOUVEA; SANTOS, DANIELLE GONCALVES; RODRIGUES, JORGE L. MAZZA; TSAI, SIU MUI; ANDREOTE, FERNANDO DINI. Methanogenic communities and methane emissions from enrichments of Brazilian Amazonia soils under land-use change. MICROBIOLOGICAL RESEARCH, v. 265, p. 9-pg., 2022-09-13. (14/50320-4, 16/18745-0, 16/02219-8)