Changes in the gene expression of gastric and intestinal tissues of patients with tpe 2 diabetes mellitus submitted to Roux-en-Y gastric bypass

Author(s)

Priscila Sala Kobal

• Document type: Doctoral Thesis
• Press: São Paulo.
• Institution: Universidade de São Paulo (USP). Faculdade de Medicina (FM/SBD)
• Defense date: 2017-03-16

Examining board members

Dan Linetzky Waitzberg; Carlos Alberto Malheiros; Claudia Pinto Marques Souza de Oliveira; Claudia Cristina Alves Pereira; Ulysses Ribeiro Júnior

• Advisor: Dan Linetzky Waitzberg; Daniel Giannella Neto

Abstract

In obese patients with type 2 diabetes mellitus (T2DM), glycemic control is observed within a few days after Roux-en-Y gastric bypass (RYGB), even before significant weight loss. Among the mechanisms proposed to explain this metabolic benefit, those involving gastrointestinal (GI) adaptations in response to surgical anatomical rearreagement are the most consistent. The present study evaluated the global response of the gastrointestinal transcriptome to DGYR in obese patients responsive to postoperative remission of T2DM and its correlation with markers of glycemic homeostasis. Twenty adult obese patients with T2DM diagnosis and candidates to RYGB were included, according to specific criteria. All of them were submitted to standardized laparotomy RYGB surgery and followed until one year after RYGB, for the patients classification as responsive (R) and non-responsive (NR) to T2DM remission according to the American Diabetes Association (ADA) criteria. Clinical and biochemical variables involved in glycemic homeostasis were evaluated at preoperative and monthly up to 90 postoperative days. GI transcriptomic analyzes were performed by microarray technique (Genechip 1.0 ST Array; AffymetrixTM), in RNA samples obtained from biopsies of the stomach cardia (SC), stomach fundus (SF), duodenum, jejunum and ileum, collected by double-balloon enteroscopy (DBE) at pre-postoperative and 90 days after RYGB. The non-parametric Rank Products (RP) method was used for selection of differentially expressed genes (DEGs). DEGs identified by RP were submitted to the Ingenuity Pathways Analysis (IPA) program for its selection within the following functions: 1) Carbohydrate Metabolism; 2) Lipid Metabolism; 3) Amino Acids Metabolism, 4) Metabolic Diseases and 5) Endocrine System Disorder. DEGs related with these five functions were submitted to the analysis of Pearson hierarchical clustering, functional classification of gene ontology (GOslim), functional enrichment (DAVID software, using KEGG and Biocarta database), and canonical pathways (IPA). These analyzes were performed separately in R and NR groups. DEGs of interest were validated by RT-qPCR using Taqman® assays in 7500 FastTM (Life Technologies). The Spearman correlation coefficient correlated clinical and biochemical variables with DEGs. From the 20 patients studied, 12 were classified as R and 8 as NR. In the 5 functions of interest, the number of DEGs found in R group were: 99 (SC), 26 (SF), 62 (duodenum), 241 (jejunum) and 63 (ileum). Among the DEGs found in the duodenum, 8 presented a strong to a very strong positive correlation (Spearman coefficient > 0.7) with systemic concentrations of glycemia or glycated hemoglobin. Of these genes, LDLR, MMP1, NPC1L1 and SLC2A5 were subjected to RT-qPCR analysis and validated by the method. According to the functional enrichment and canonical pathways analyzes between groups (R and NR), only the LXR/RXR pathway, representative of DEGs found in the duodenum of R patients, was associated with T2DM remission. In the other GI segments, these analyzes did not identify representative pathways related to T2DM, although some of their DEGs were potentially involved with markers of glycemic homeostasis. In conclusion, RYGB induced gastrointestinal transcriptomics changes in obese patients with postoperative remission of T2DM and some of these were associated with markers of glycemic homeostasis, mainly by changes in LXR pathway in the duodenum (AU)

• FAPESP's process: 13/03246-0 - Genomic, proteomic and metabolomic study of gastrointestinal tissue for patients with type 2 Diabetes mellitus after Roux-en-Y gastric bypass
• Grantee: Priscila Sala Kobal
• Support Opportunities: Scholarships in Brazil - Doctorate (Direct)