Research Grants 22/02821-0 - Pneumologia, Fibrose pulmonar - BV FAPESP
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Biomarker profiling of the Progressive Fibrosing Interstitial Lung Disease: why does it progress and how to identify it early?

Abstract

Patients with fibrosing interstitial lung disease (ILD), such as hypersensitivity pneumonitis, highly prevalent in Brazil, may develop acute exacerbations, despite an optimal treatment established, thus promoting a progressive phenotype of high morbidity and mortality in one third of them. Objectives: to unravel the pathophysiology of progressive fibrosing ILDs by validating biomarkers of its progression. Patient and Methods: Spatial transcriptome will be performed on surgical lung biopsy of 5 patients with progressive fibrosing ILD and 5 with stable ILD, in addition to 6 with exacerbations by minimally invasive autopsy. Confirmation of the findings will be performed by immunohistochemistry, qPCR and transmission electron microscopy with immunogold. Validation will be performed in 200 patients with fibrosing ILDs and 50 controls (lung cancer) by immunohostochemistry/morphometry and qPCR in transbronchial biopsy and flow cytometry in bronchoalveolar lavage. Clinical-radiopathological evaluation will be performed in all cases, including radiogenomics. Data integration will be analyzed by bioinformatics, deep learning and artificial intelligence. Expected Results: to identify the molecular pathways that promote exacerbations and the consequent progression of fibrosis through the integration of transcriptomic, molecular and clinical-radiopathological data, in order to temporally make up the natural history of disease, thus determining the pathophysiological process and its biomarkers capable of predicting the phenotype of progressive fibrosing ILD in the initial phase of disease. (AU)

Articles published in Agência FAPESP Newsletter about the research grant:
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Scientific publications
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
DE OLIVEIRA, JAMILE BARBOZA; SILVA, SAULO BRITO; FERNANDES, IGOR LIMA; BATAH, SABRINA SETEMBRE; HERRERA, ANDREA JAZEL RODRIGUEZ; CETLIN, ANDREA DE CASSIA VERNIER ANTUNES; FABRO, ALEXANDRE TODOROVIC. Dendritic cell-based immunotherapy in non-small cell lung cancer: a comprehensive critical review. FRONTIERS IN IMMUNOLOGY, v. 15, p. 11-pg., . (23/10184-3, 22/02821-0, 23/10186-6)
BATAH, SABRINA SETESMBRE; ZIMERMAM, HELOISA; MARCO, MARIA JULIA; ALMEIDA, JOAO PAULO; WADA, DANILO; SCHNEPPER, AMANDA; CARVALHO, ROBSON; FABRO, ALEXANDRE. Whole transcriptome profile underlies the COVID-19 bimodal phenotypes. European Respiratory Journal, v. 62, p. 2-pg., . (20/13370-4, 21/09024-6, 22/02821-0)