Development of microorganisms and thermophilic enzymes involved in the degradation and upcycling of fossil plastics

• Grant number: 22/08958-8
• Support Opportunities: Regular Research Grants
• Start date: May 01, 2023
• End date: May 31, 2025
• Field of knowledge: Biological Sciences - Biochemistry - Enzymology
• Principal Investigator: Fábio Márcio Squina
• Grantee: Fábio Márcio Squina
• Host Institution: Pró-Reitoria de Pós-Graduação, Pesquisa, Extensão e Inovação. Universidade de Sorocaba (UNISO). Sorocaba , SP, Brazil
• Associated researchers: André Ricardo de Lima Damasio ; Geizecler Tomazetto ; João Renato Carvalho Muniz ; José Martins de Oliveira Junior ; Wanius José Garcia da Silva
• Associated scholarship(s): 24/13982-0 - DEVELOPMENT OF A POLYETHYLENE DEGRADING THERMOPHILIC MICROBIAL CONSORTIUM, BP.TT; 24/06235-4 - PROSPECTION, EXPRESSION, PRODUCTION, PURIFICATION AND CHARACTERIZATION OF TPAZYMES, BP.TT; 23/04782-5 - PROSPECTION, EXPRESSION, PRODUCTION, PURIFICATION AND CHARACTERIZATION OF TPAZYMES, BP.TT; 23/04828-5 - DEVELOPMENT OF A POLYETHYLENE DEGRADING THERMOPHILIC MICROBIAL CONSORTIUM, BP.TT; 23/04941-6 - Isolation of thermophilic microorganisms capable of degrading polyethylene, BP.TT

Abstract

Plastic materials derived from fossils (PDF) exhibit exceptional properties, including durability, strength, and versatility, and are present in virtually every activity of everyday life. PDFs are inert compounds generally used for producing goods with a short life cycle. As a result of the intense use of PDFs in our society, humanity is facing severe socioeconomic and environmental challenges due to the disposal and accumulation of PDFs in terrestrial and marine environments. It is estimated that if the production and management of this waste follow current trends, we will have deposited around 12 billion metric tons of plastic waste in landfills and the natural environment by 2050. Mechanical and chemical recycling processes are important, but they are insufficient to contain the problems related to PDF pollution because the percentage of PDF recycled after disposal is relatively low. Furthermore, these processes are expensive and limited to low-contamination plastic materials. In addition, these processes generate waste and result in lower quality plastic materials that (at some point) will also be discarded and, in this way, only postponing the problem. Recent studies have shown that biotechnological processes are feasible for economically sustainable plastic waste management. Thus, research related to the biodegradation of plastics brings hope in facing the challenges related to the intense use of PDF by humanity, offering a sustainable and promising alternative that can operate in the light of bioeconomy concepts and, with this, promote economic and social benefits to the society. However, there are still scientific gaps in making PDF upcycling a reality, not only in discovering and developing enzymes with superior catalytic properties but also related to the characterization of catabolic biochemical pathways and the isolation of microorganisms capable of promoting PDF bioconversion. In this sense, the present project aims to fill gaps in the development of biotechnological processes for PDF upcycling by generating scientific results in three lines of work: Development of a thermophilic microbial consortium that degrades polyethylene; Isolation of thermophilic microorganisms capable of degrading polyethylene and; Cloning, expression, and characterization of proteins with thermophilic enzymatic activities related to PDF degradation. The area of PDF upcycling is progressing rapidly, and new technologies to address the pollution caused by PDF present economic opportunities. Thus, this research proposal has the potential to support not only scientific impacts relevant to the area but also support the development of bioconversion technologies with commercial appeal. (AU)

Scientific publications

(10)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

ANDRADE, VIVIANE BRITO; TOMAZETTO, GEIZECLER; ALMEIDA, DNANE VIEIRA; TRAMONTINA, ROBSON; SQUINA, FABIO MARCIO; GARCIA, WANIUS. Enzymatic and biophysical characterization of a novel modular cellulosomal GH5 endoglucanase multifunctional from the anaerobic gut fungus Piromyces finnis. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, v. 1872, n. 1, p. 11-pg., 2024-01-01. (20/15595-3, 20/05784-3, 21/04254-3, 15/23279-6, 22/08958-8, 15/50590-4)

SANTANA JR, MARCEL B.; GAMA, FELIPE AVILA; PEREIRA, ISABELA O.; TRAMONTINA, ROBSON; SQUINA, FABIO MARCIO; AMBROSI, ALAN; ZIELINSKI, ACACIO; POLETTO, PATRICIA; IENCZAK, JACIANE L.. Harnessing tobacco stem biomass for eco-friendly xylo-oligomers production via hydrothermal treatment and succinic acid via fermentation. JOURNAL OF CLEANER PRODUCTION, v. 456, p. 12-pg., 2024-05-02. (20/05784-3, 22/08958-8, 21/04254-3)

ROMAN, ELLEN KAREN BARRETO; RAMOS, MURILO ANTONIO; TOMAZETTO, GEIZECLER; FOLTRAN, BRUNO BOTEGA; GALVAO, MATHEUS HENRIQUE; CIANCAGLINI, IARA; TRAMONTINA, ROBSON; RODRIGUES, FELIPE DE ALMEIDA; DA SILVA, LARISSA SOARES; SANDANO, ANA LUIZA HERNANDES; et al. Plastic-degrading microbial communities reveal novel microorganisms, pathways, and biocatalysts for polymer degradation and bioplastic production. Science of The Total Environment, v. 949, p. 14-pg., 2024-08-02. (19/19360-3, 23/04941-6, 20/05784-3, 23/04828-5, 15/23279-6, 23/08832-7, 20/11019-8, 23/04782-5, 21/04254-3, 22/08958-8, 23/12398-0, 22/05731-2, 22/14112-4)

PROCOPIO, DIELLE PIEROTTI; LEE, JAE WON; SHIN, JONGHYEOK; TRAMONTINA, ROBSON; AVILA, PATRICIA FELIX; BRENELLI, LIVIA BEATRIZ; SQUINA, FABIO MARCIO; DAMASIO, ANDRE; RABELO, SARITA CANDIDA; GOLDBECK, ROSANA; et al. Metabolic engineering of Saccharomyces cerevisiae for second-generation ethanol production from xylo-oligosaccharides and acetate. SCIENTIFIC REPORTS, v. 13, n. 1, p. 14-pg., 2023-11-06. (17/15477-8, 20/05784-3, 15/50612-8, 18/17172-2, 18/01759-4, 22/08958-8, 21/04254-3, 15/50590-4, 22/05731-2, 19/18075-3)

LIBERATO, MARCELO VIZONA; PAIXAO, DOUGLAS ANTONIO ALVAREDO; TOMAZETTO, GEIZECLER; NDEH, DIDIER; BOLAM, DAVID N.; SQUINA, FABIO MARCIO. Discovery, structural characterization, and functional insights into a novel apiosidase from the GH140 family, isolated from a lignocellulolytic-enriched mangrove microbial community. Biotechnology Letters, v. 46, n. 2, p. 11-pg., 2024-01-27. (17/12597-2, 14/04105-4, 20/05784-3, 22/08958-8)

VILELA, NATHALIA; GORKOVSKIY, ANTON; HERRERA-MALAVER, BEATRIZ; TRAMONTINA, ROBSON; CAIRO, JOAO PAULO L. FRANCO; MANDELLI, FERNANDA; GONCALVES, THIAGO; SODRE, VICTORIA; STEENSELS, JAN; DAMASIO, ANDRE; et al. From residues to clove: Harnessing novel phenolic acid decarboxylase for 4-Vinyl guaiacol production in industrial Yeast. FOOD AND BIOPRODUCTS PROCESSING, v. 151, p. 8-pg., 2025-03-06. (20/05784-3, 22/05731-2, 22/08958-8, 15/50590-4, 20/10593-2, 17/08166-6, 21/04254-3)

TRAMONTINA, ROBSON; SCOPEL, EUPIDIO; BRENELLI, LIVIA; NOGUEIRA, GUILHERME P.; FRANCO, TELMA T.; REZENDE, CAMILA A.; GOLDBECK, ROSANA; SQUINA, FABIO M.. Applying biorefinery concepts for sugarcane straw upcycling using alkaline and enzymatic treatments to produce value-added compounds and bioenergy. BIOMASS & BIOENERGY, v. 178, p. 9-pg., 2023-10-12. (19/19360-3, 17/15477-8, 15/50612-8, 20/05784-3, 18/23769-1, 22/08958-8, 21/04254-3, 15/50590-4)

CAIRO, JOA O PAULO L. FRANCO; ALMEIDA, DNANE V.; ANDRADE, VIVIANE B.; TELFER, ABBEY; GONCALVES, THIAGO A.; DIAZ, DANIEL E.; FIGUEIREDO, FERNANDA L.; BRENELLI, LIVIA B.; WALTON, PAUL H.; GARCIA, WANIUS; et al. Biochemical and structural insights of a recombinant AA16 LPMO from the marine and sponge-symbiont Peniophora sp. International Journal of Biological Macromolecules, v. 280, p. 11-pg., 2024-09-18. (20/05784-3, 22/08958-8, 18/13500-5, 15/50590-4, 22/05731-2, 17/17275-3)

TRAMONTINA, ROBSON; ORDONEZ, DIEGO ANDRES RUEDA; SILVELLO, MARIA AUGUSTA DE CARVALHO; SODRE, VICTORIA; DE MELO, ALLAN HENRIQUE FELIX; GOLDBECK, ROSANA; SQUINA, FABIO MARCIO. Intensification and techno-economic analysis of a biocatalytic process for coniferol production from ferulic acid: An innovative strategy for lignin valorization. JOURNAL OF CLEANER PRODUCTION, v. 427, p. 11-pg., 2023-10-13. (22/08958-8, 21/04254-3)

TRAMONTINA, ROBSON; SCOPEL, EUPIDIO; CARDOSO, VICTOR GUSTAVO KELIS; MARTINS, MANOELA; DA SILVA, MARCOS FELLIPE; FLAIBAM, BARBARA; SALVADOR, MARCOS J.; GOLDBECK, ROSANA; DAMASIO, ANDRE; SQUINA, FABIO MARCIO. Hydroxycinnamic Acid Extraction from Multiple Lignocellulosic Sources: Correlations with Substrate Composition and Taxonomy for Flavoring and Antioxidant Applications. Journal of Agricultural and Food Chemistry, v. 72, n. 50, p. 12-pg., 2024-12-05. (20/02871-2, 22/08958-8, 19/19360-3, 21/04254-3, 22/05731-2, 21/09693-5, 15/50590-4)