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Fábio Márcio Squina

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Universidade de Sorocaba (UNISO). Pró-Reitoria de Pós-Graduação, Pesquisa, Extensão e Inovação  (Institutional affiliation for the last research proposal)
Birthplace: Brazil

Dr Fabio Squina is Pharmacist, MS in Food Science and Ph.D. in Molecular and Cell Biology. He has the background on Biochemistry, Molecular Biology and Omics Sciences. Currently, he serves as adjunct professor position at UNISO (http://pta.uniso.br/), and academic advisor appointments at UNICAMP . Fabio Squina?s scientific interests focus on biocatalyst discovery and development of biotechnological routes for lignocellulose conversion into high value products. Dr Fabio Squina?s research group has made contributions on metagenomics-based enzyme discovery field, establishing discovery platform, based on targeted community enrichment protocols and 'Omics' approaches. FS?s group has also successfully engagement on the development of enzymatic routes for the production of natural probiotics, phenolic compounds, and antioxidant molecules. These biotechnological initiatives are aligned to bio-refinery interests based on the potential of adding value to lignocellulose, such as sugarcane bagasse. Dr. Squina received the prestigious Young Investigator Award from São Paulo Research Foundation (FAPESP) on 2009. From 2013 to 2017, Dr. Squina coordinated Industrial Innovation project with Eli Lilly Brazil as co-Financier. Since July 2017, Dr. Squina coordinates FAPESP thematic grant entitled: Lignin valorization in cellulosic ethanol plants: biocatalytic conversion via ferulic acid to high-value chemicals. Dr. Squina has published more than a hundred papers and disclosed eight certificates of patents. (Source: Lattes Curriculum)

Articles published in Pesquisa para Inovação FAPESP about the researcher:
Novel biotechnological route developed to obtain fine chemicals from agricultural waste 
News published in Agência FAPESP Newsletter about the researcher
Articles published in other media outlets (0 total):
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Scientific publications resulting from Research Grants and Scholarships under the grantee's responsibility (63)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

Publications68
Citations782
Cit./Article11.5
Data from Web of Science

PELLEGRINI, VANESSA O. A.; SERPA, VIVIANE ISABEL; GODOY, ANDRE S.; CAMILO, CESAR M.; BERNARDES, AMANDA; REZENDE, CAMILA A.; PEREIRA JUNIOR, NEI; CAIRO, JOAO PAULO L. FRANCO; SQUINA, FABIO M.; POLIKARPOV, IGOR. Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme. Applied Microbiology and Biotechnology, v. 99, n. 22, p. 9591-9604, . Web of Science Citations: 11. (10/18773-8, 08/56255-9, 11/05712-3, 09/52840-7, 11/20977-3, 09/05328-9)

DAMASIO, ANDRE R. L.; PINTO BRAGA, CLEITON MARCIO; BRENELLI, LIVIA B.; CITADINI, ANA PAULA; MANDELLI, FERNANDA; COTA, JUNIO; DE ALMEIDA, RODRIGO FERREIRA; SALVADOR, VICTOR HUGO; ALVAREDO PAIXAO, DOUGLAS ANTONIO; SEGATO, FERNANDO; et al. Biomass-to-bio-products application of feruloyl esterase from Aspergillus clavatus. Applied Microbiology and Biotechnology, v. 97, n. 15, p. 6759-6767, . Web of Science Citations: 33. (08/58037-9, 11/02169-7, 09/17956-4)

COTA, JUNIO; OLIVEIRA, LEANDRO C.; DAMASIO, ANDRE R. L.; CITADINI, ANA P.; HOFFMAM, ZAIRA B.; ALVAREZ, THABATA M.; CODIMA, CARLA A.; LEITE, VITOR B. P.; PASTORE, GLAUCIA; DE OLIVEIRA-NETO, MARIO; et al. Assembling a xylanase-lichenase chimera through all-atom molecular dynamics simulations. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, v. 1834, n. 8, p. 1492-1500, . Web of Science Citations: 15. (08/58037-9, 11/02169-7, 11/13242-7)

ALVAREZ, THABATA M.; GOLDBECK, ROSANA; DOS SANTOS, CAMILA RAMOS; PAIXAO, DOUGLAS A. A.; GONCALVES, THIAGO A.; FRANCO CAIRO, JOAO PAULO L.; ALMEIDA, RODRIGO FERREIRA; PEREIRA, ISABELA DE OLIVEIRA; JACKSON, GEORGE; COTA, JUNIO; et al. Development and Biotechnological Application of a Novel Endoxylanase Family GH10 Identified from Sugarcane Soil Metagenome. PLoS One, v. 8, n. 7, . Web of Science Citations: 12. (08/58037-9, 11/20977-3, 10/11469-1)

HOFFMAM, ZAIRA B.; OLIVEIRA, LEANDRO C.; COTA, JUNIO; ALVAREZ, THABATA M.; DIOGO, JOS A.; NETO, MARIO DE OLIVEIRA; CITADINI, ANA PAULA S.; LEITE, VITOR B. P.; SQUINA, FABIO M.; MURAKAMI, MARIO T.; et al. Characterization of a Hexameric Exo-Acting GH51 alpha-l-Arabinofuranosidase from the Mesophilic Bacillus subtilis. MOLECULAR BIOTECHNOLOGY, v. 55, n. 3, p. 260-267, . Web of Science Citations: 6. (10/51890-8, 08/58037-9, 11/14200-6, 11/17658-3, 11/13242-7)

SQUINA‚ F. M.; PEDROSA‚ A. L.; NUNES‚ V. S.; CRUZ‚ A. K.; TOSI‚ L. R. O.. Shuttle mutagenesis and targeted disruption of a telomere-located essential gene of Leishmania. Parasitology, v. 134, n. 04, p. 511-522, . (99/12403-3)

GOLDBECK, ROSANA; DAMASIO, ANDRE R. L.; GONCALVES, THIAGO A.; MACHADO, CARLA B.; PAIXAO, DOUGLAS A. A.; WOLF, LUCIA D.; MANDELLI, FERNANDA; ROCHA, GEORGE J. M.; RULLER, ROBERTO; SQUINA, FABIO M.. Development of hemicellulolytic enzyme mixtures for plant biomass deconstruction on target biotechnological applications. Applied Microbiology and Biotechnology, v. 98, n. 20, p. 8513-8525, . Web of Science Citations: 23. (08/58037-9, 12/18859-5, 13/18910-3)

DIOGO, JOSE A.; HOFFMAM, ZAIRA B.; ZANPHORLIN, LETICIA M.; COTA, JUNIO; MACHADO, CARLA B.; WOLF, LUCIA D.; SQUINA, FABIO; DAMASIO, ANDRE R. L.; MURAKAMI, MARIO T.; RULLER, ROBERTO. Development of a chimeric hemicellulase to enhance the xylose production and thermotolerance. Enzyme and Microbial Technology, v. 69, p. 31-37, . Web of Science Citations: 10. (08/58037-9, 13/10443-7, 11/14200-6)

DOS REIS ALMEIDA, FAUSTO BRUNO; PIGOSSO, LAURINE LACERDA; DE LIMA DAMASIO, ANDRE RICARDO; MONTEIRO, VALDIRENE NEVES; DE ALMEIDA SOARES, CELIA MARIA; SILVA, ROBERTO NASCIMENTO; ROQUE-BARREIRA, MARIA CRISTINA. alpha-(1,4)-Amylase, but not alpha- and beta-(1,3)-glucanases, may be responsible for the impaired growth and morphogenesis of Paracoccidioides brasiliensis induced by N-glycosylation inhibition. YEAST, v. 31, n. 1, p. 1-11, . Web of Science Citations: 7. (06/60642-2, 11/02169-7, 09/51197-3)

MANDELLI, F.; BRENELLI, L. B.; ALMEIDA, R. F.; GOLDBECK, R.; WOLF, L. D.; HOFFMAM, Z. B.; RULLER, R.; ROCHA, G. J. M.; MERCADANTE, A. Z.; SQUINA, F. M.. Simultaneous production of xylooligosaccharides and antioxidant compounds from sugarcane bagasse via enzymatic hydrolysis. INDUSTRIAL CROPS AND PRODUCTS, v. 52, p. 770-775, . Web of Science Citations: 27. (08/58037-9, 13/03061-0, 11/14200-6, 12/18859-5)

DIAS, FABRICIO C.; RUIZ, JERONIMO C.; LOPES, WILTON C. Z.; SQUINA, FABIO M.; RENZI, ADRIANA; CRUZ, ANGELA K.; TOSI, LUIZ R. O.. Organization of H locus conserved repeats in Leishmania (Viannia) braziliensis correlates with lack of gene amplification and drug resistance. Parasitology Research, v. 101, n. 3, p. 667-676, .

SEGATO, FERNANDO; DAMASIO, ANDRE R. L.; GONCALVES, THIAGO A.; DE LUCAS, ROSYMAR C.; SQUINA, FABIO M.; DECKER, STEPHEN R.; PRADE, ROLF A.. High-yield secretion of multiple client proteins in Aspergillus. Enzyme and Microbial Technology, v. 51, n. 2, p. 100-106, . Web of Science Citations: 37. (10/18198-3)

FRANCO CAIRO, JOAO PAULO L.; LEONARDO, FLAVIA C.; ALVAREZ, THABATA M.; RIBEIRO, DANIELA A.; BUECHLI, FERNANDA; COSTA-LEONARDO, ANA M.; CARAZZOLLE, MARCELO F.; COSTA, FERNANDO F.; PAES LEME, ADRIANA F.; PEREIRA, GONCALO A. G.; et al. Functional characterization and target discovery of glycoside hydrolases from the digestome of the lower termite Coptotermes gestroi. BIOTECHNOLOGY FOR BIOFUELS, v. 4, . Web of Science Citations: 23. (08/58037-9, 10/11469-1)

DAMASIO, ANDRE R. L.; RUBIO, MARCELO V.; OLIVEIRA, LEANDRO C.; SEGATO, FERNANDO; DIAS, BRUNO A.; CITADINI, ANA P.; PAIXAO, DOUGLAS A.; SQUINA, FABIO M.. Understanding the Function of Conserved Variations in the Catalytic Loops of Fungal Glycoside Hydrolase Family 12. Biotechnology and Bioengineering, v. 111, n. 8, p. 1494-1505, . Web of Science Citations: 12. (08/58037-9, 11/13242-7, 12/12859-3)

BORIN, GUSTAVO PAGOTTO; SANCHEZ, CAMILA CRISTINA; DE SOUZA, AMANDA PEREIRA; DE SANTANA, ELIANE SILVA; DE SOUZA, ALINE TIEPPO; PAES LEME, ADRIANA FRANCO; SQUINA, FABIO MARCIO; BUCKERIDGE, MARCOS; GOLDMAN, GUSTAVO HENRIQUE; DE CASTRO OLIVEIRA, JULIANA VELASCO. Comparative Secretome Analysis of Trichoderma reesei and Aspergillus niger during Growth on Sugarcane Biomass. PLoS One, v. 10, n. 6, . Web of Science Citations: 38. (11/08945-9, 13/09541-4, 13/01071-9)

CORREA, THAMY L. R.; FRANCO CAIRO, JOAO PAULO L.; COTA, JUNIO; DAMASIO, ANDRE; OLIVEIRA, LEANDRO C.; SQUINA, FABIO M.. A novel mechanism of beta-glucosidase stimulation through a monosaccharide binding-induced conformational change. International Journal of Biological Macromolecules, v. 166, p. 1188-1196, . Web of Science Citations: 0. (15/50590-4, 16/09950-0, 12/20549-4, 10/18198-3)

BRENELLI, LIVIA BEATRIZ; MARIUTTI, LILIAN REGINA BARROS; PORTUGAL, RODRIGO VILLARES; DE FARIAS, MARCELO ALEXANDRE; BRAGAGNOLO, NEURA; MERCADANTE, ADRIANA ZERLOTTI; FRANCO, TELMA TEIXEIRA; RABELO, SARITA CANDIDA; SQUINA, FABIO MARCIO. Modified lignin from sugarcane bagasse as an emulsifier in oil-in-water nanoemulsions. INDUSTRIAL CROPS AND PRODUCTS, v. 167, . Web of Science Citations: 0. (20/05784-3, 15/50612-8, 15/50590-4, 13/03061-0)

ALVAREDO PAIXAO, DOUGLAS ANTONIO; TOMAZETTO, GEIZECLER; SODRE, VICTORIA RAMOS; GONCALVES, THIAGO A.; UCHIMA, CRISTIANE AKEMI; BUCHLI, FERNANDA; ALVAREZ, THABATA MARIA; PERSINOTI, GABRIELA FELIX; DA SILVA, MARCIO JOSE; BRAGATTO, JULIANO; et al. Microbial enrichment and meta-omics analysis identify CAZymes from mangrove sediments with unique properties. Enzyme and Microbial Technology, v. 148, . Web of Science Citations: 0. (12/19040-0, 15/50590-4, 14/04105-4, 16/09950-0, 15/23279-6, 18/18101-1, 17/16089-1)

SPENCE, EDWARD M.; SCOTT, HEATHER T.; DUMOND, LOUISON; CALVO-BADO, LEONIDES; DI MONACO, SABRINA; WILLIAMSON, JAMES J.; PERSINOTI, GABRIELA F.; SQUINA, FABIO M.; BUGG, TIMOTHY D. H.. The Hydroxyquinol Degradation Pathway in Rhodococcus jostii RHA1 and Agrobacterium Species Is an Alternative Pathway for Degradation of Protocatechuic Acid and Lignin Fragments. Applied and Environmental Microbiology, v. 86, n. 19, . Web of Science Citations: 3. (15/50590-4)

FRANCO CAIRO, JOAO PAULO L.; CANNELLA, DAVID; OLIVEIRA, LEANDRO C.; GONCALVES, THIAGO A.; RUBIO, MARCELO V.; TERRASAN, CESAR R. F.; TRAMONTINA, ROBSON; MOFATTO, LUCIANA S.; CARAZZOLLE, MARCELO F.; GARCIA, WANIUS; et al. On the roles of AA15 lytic polysaccharide monooxygenases derived from the termite Coptotermes gestroi. Journal of Inorganic Biochemistry, v. 216, . Web of Science Citations: 1. (17/17275-3, 16/09950-0, 15/50590-4, 17/11952-3, 15/50612-8, 17/22669-0, 17/16089-1)

PIMENTEL, AGNES C.; EMATSU, GABRIELA C. G.; LIBERATO, MARCELO V.; PAIXAO, DOUGLAS A. A.; FRANCO CAIRO, JOAO PAULO L.; MANDELLI, FERNANDA; TRAMONTINA, ROBSON; GANDIN, CESAR A.; DE OLIVEIRA NETO, MARIO; SQUINA, FABIO M.; et al. Biochemical and biophysical properties of a metagenome-derived GH5 endoglucanase displaying an unconventional domain architecture. International Journal of Biological Macromolecules, v. 99, p. 384-393, . Web of Science Citations: 5. (10/11469-1, 08/58037-9, 14/04105-4, 14/06923-6, 16/01926-2, 14/12861-3)

BRENELLI, LIVIA; SQUINA, FABIO M.; FELBY, CLAUS; CANNELLA, DAVID. Laccase-derived lignin compounds boost cellulose oxidative enzymes AA9. BIOTECHNOLOGY FOR BIOFUELS, v. 11, . Web of Science Citations: 25. (15/07008-2)

TRAMONTINA, ROBSON; FRANCO CAIRO, JOAO PAULO L.; LIBERATO, MARCELO V.; MANDELLI, FERNANDA; SOUSA, AMANDA; SANTOS, SAMANTHA; RABELO, SARITA CANDIDA; CAMPOS, BRUNA; IENCZAK, JACIANE; RULLER, ROBERTO; et al. The Coptotermes gestroi aldo-keto reductase: a multipurpose enzyme for biorefinery applications. BIOTECHNOLOGY FOR BIOFUELS, v. 10, . Web of Science Citations: 6. (08/58037-9, 14/04105-4, 12/20549-4, 13/06336-0, 14/20576-7)

SEGATO, FERNANDO; DAMASIO, ANDRE R. L.; DE LUCAS, ROSYMAR C.; SQUINA, FABIO M.; PRADE, ROLF A.. Genomics Review of Holocellulose Deconstruction by Aspergilli. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, v. 78, n. 4, p. 588-613, . Web of Science Citations: 33. (13/18910-3, 10/18198-3, 08/58037-9, 12/20549-4)

BORIN, GUSTAVO PAGOTTO; SANCHEZ, CAMILA CRISTINA; DE SANTANA, ELIANE SILVA; ZANINI, GUILHERME KEPPE; CORREA DOS SANTOS, RENATO AUGUSTO; PONTES, ANGELICA DE OLIVEIRA; DE SOUZA, ALINE TIEPPO; TAVARES SOARES DAL'MAS, ROBERTA MARIA MENEGALDO; RIANO-PACHON, DIEGO MAURICIO; GOLDMAN, GUSTAVO HENRIQUE; et al. Comparative transcriptome analysis reveals different strategies for degradation of steam-exploded sugarcane bagasse by Aspergillus niger and Trichoderma reesei. BMC Genomics, v. 18, . Web of Science Citations: 22. (14/11733-1, 14/15799-7, 13/09541-4, 15/08222-8, 11/08945-9, 14/11766-7)

DOS REIS ALMEIDA, FAUSTO BRUNO; PIGOSSO, LAURINE LACERDA; DE LIMA DAMASIO, ANDRE RICARDO; MONTEIRO, VALDIRENE NEVES; DE ALMEIDA SOARES, CELIA MARIA; SILVA, ROBERTO NASCIMENTO; ROQUE-BARREIRA, MARIA CRISTINA. alpha-(1,4)-Amylase, but not alpha- and beta-(1,3)-glucanases, may be responsible for the impaired growth and morphogenesis of Paracoccidioides brasiliensis induced by N-glycosylation inhibition. YEAST, v. 31, n. 1, p. 1-11, . Web of Science Citations: 7. (06/60642-2, 11/02169-7, 09/51197-3)

MANDELLI, F.; BRENELLI, L. B.; ALMEIDA, R. F.; GOLDBECK, R.; WOLF, L. D.; HOFFMAM, Z. B.; RULLER, R.; ROCHA, G. J. M.; MERCADANTE, A. Z.; SQUINA, F. M.. Simultaneous production of xylooligosaccharides and antioxidant compounds from sugarcane bagasse via enzymatic hydrolysis. INDUSTRIAL CROPS AND PRODUCTS, v. 52, p. 770-775, . Web of Science Citations: 27. (08/58037-9, 12/18859-5, 11/14200-6, 13/03061-0)

DAMASIO, ANDRE R. L.; RUBIO, MARCELO V.; OLIVEIRA, LEANDRO C.; SEGATO, FERNANDO; DIAS, BRUNO A.; CITADINI, ANA P.; PAIXAO, DOUGLAS A.; SQUINA, FABIO M.. Understanding the Function of Conserved Variations in the Catalytic Loops of Fungal Glycoside Hydrolase Family 12. Biotechnology and Bioengineering, v. 111, n. 8, p. 1494-1505, . Web of Science Citations: 12. (11/13242-7, 08/58037-9, 12/12859-3)

HAHN SCHNEIDER, WILLIAN DANIEL; GONCALVES, THIAGO AUGUSTO; UCHIMA, CRISTIANE AKEMI; COUGER, MATTHEW BRIAN; PRADE, ROLF; SQUINA, FABIO MARCIO; PINHEIRO DILLON, ALDO JOSE; CAMASSOLA, MARLI. Penicillium echinulatum secretome analysis reveals the fungi potential for degradation of lignocellulosic biomass. BIOTECHNOLOGY FOR BIOFUELS, v. 9, . Web of Science Citations: 23. (14/06923-6, 12/19040-0, 08/58037-9)

GOLDBECK, ROSANA; GONCALVES, THIAGO A.; DAMASIO, ANDRE R. L.; BRENELLI, LIVIA B.; WOLF, LUCIA D.; PAIXAO, DOUGLAS A. A.; ROCHA, GEORGE J. M.; SQUINA, FABIO M.. Effect of hemicellulolytic enzymes to improve sugarcane bagasse saccharification and xylooligosaccharides production. JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, v. 131, p. 36-46, . Web of Science Citations: 6. (12/18859-5, 12/20549-4)

COTA, JUNIO; OLIVEIRA, LEANDRO C.; DAMASIO, ANDRE R. L.; CITADINI, ANA P.; HOFFMAM, ZAIRA B.; ALVAREZ, THABATA M.; CODIMA, CARLA A.; LEITE, VITOR B. P.; PASTORE, GLAUCIA; DE OLIVEIRA-NETO, MARIO; et al. Assembling a xylanase-lichenase chimera through all-atom molecular dynamics simulations. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, v. 1834, n. 8, p. 1492-1500, . Web of Science Citations: 15. (08/58037-9, 11/02169-7, 11/13242-7)

ALVAREZ, THABATA M.; GOLDBECK, ROSANA; DOS SANTOS, CAMILA RAMOS; PAIXAO, DOUGLAS A. A.; GONCALVES, THIAGO A.; FRANCO CAIRO, JOAO PAULO L.; ALMEIDA, RODRIGO FERREIRA; PEREIRA, ISABELA DE OLIVEIRA; JACKSON, GEORGE; COTA, JUNIO; et al. Development and Biotechnological Application of a Novel Endoxylanase Family GH10 Identified from Sugarcane Soil Metagenome. PLoS One, v. 8, n. 7, . Web of Science Citations: 12. (08/58037-9, 11/20977-3, 10/11469-1)

HOFFMAM, ZAIRA B.; OLIVEIRA, LEANDRO C.; COTA, JUNIO; ALVAREZ, THABATA M.; DIOGO, JOS A.; NETO, MARIO DE OLIVEIRA; CITADINI, ANA PAULA S.; LEITE, VITOR B. P.; SQUINA, FABIO M.; MURAKAMI, MARIO T.; et al. Characterization of a Hexameric Exo-Acting GH51 alpha-l-Arabinofuranosidase from the Mesophilic Bacillus subtilis. MOLECULAR BIOTECHNOLOGY, v. 55, n. 3, p. 260-267, . Web of Science Citations: 6. (10/51890-8, 08/58037-9, 11/14200-6, 11/17658-3, 11/13242-7)

SQUINA‚ F. M.; PEDROSA‚ A. L.; NUNES‚ V. S.; CRUZ‚ A. K.; TOSI‚ L. R. O.. Shuttle mutagenesis and targeted disruption of a telomere-located essential gene of Leishmania. Parasitology, v. 134, n. 04, p. 511-522, . (99/12403-3)

GOLDBECK, ROSANA; DAMASIO, ANDRE R. L.; GONCALVES, THIAGO A.; MACHADO, CARLA B.; PAIXAO, DOUGLAS A. A.; WOLF, LUCIA D.; MANDELLI, FERNANDA; ROCHA, GEORGE J. M.; RULLER, ROBERTO; SQUINA, FABIO M.. Development of hemicellulolytic enzyme mixtures for plant biomass deconstruction on target biotechnological applications. Applied Microbiology and Biotechnology, v. 98, n. 20, p. 8513-8525, . Web of Science Citations: 23. (08/58037-9, 12/18859-5, 13/18910-3)

DIOGO, JOSE A.; HOFFMAM, ZAIRA B.; ZANPHORLIN, LETICIA M.; COTA, JUNIO; MACHADO, CARLA B.; WOLF, LUCIA D.; SQUINA, FABIO; DAMASIO, ANDRE R. L.; MURAKAMI, MARIO T.; RULLER, ROBERTO. Development of a chimeric hemicellulase to enhance the xylose production and thermotolerance. Enzyme and Microbial Technology, v. 69, p. 31-37, . Web of Science Citations: 10. (08/58037-9, 13/10443-7, 11/14200-6)

DOS REIS ALMEIDA, FAUSTO BRUNO; PIGOSSO, LAURINE LACERDA; DE LIMA DAMASIO, ANDRE RICARDO; MONTEIRO, VALDIRENE NEVES; DE ALMEIDA SOARES, CELIA MARIA; SILVA, ROBERTO NASCIMENTO; ROQUE-BARREIRA, MARIA CRISTINA. alpha-(1,4)-Amylase, but not alpha- and beta-(1,3)-glucanases, may be responsible for the impaired growth and morphogenesis of Paracoccidioides brasiliensis induced by N-glycosylation inhibition. YEAST, v. 31, n. 1, p. 1-11, . Web of Science Citations: 7. (06/60642-2, 11/02169-7, 09/51197-3)

MANDELLI, F.; BRENELLI, L. B.; ALMEIDA, R. F.; GOLDBECK, R.; WOLF, L. D.; HOFFMAM, Z. B.; RULLER, R.; ROCHA, G. J. M.; MERCADANTE, A. Z.; SQUINA, F. M.. Simultaneous production of xylooligosaccharides and antioxidant compounds from sugarcane bagasse via enzymatic hydrolysis. INDUSTRIAL CROPS AND PRODUCTS, v. 52, p. 770-775, . Web of Science Citations: 27. (08/58037-9, 13/03061-0, 11/14200-6, 12/18859-5)

DIAS, FABRICIO C.; RUIZ, JERONIMO C.; LOPES, WILTON C. Z.; SQUINA, FABIO M.; RENZI, ADRIANA; CRUZ, ANGELA K.; TOSI, LUIZ R. O.. Organization of H locus conserved repeats in Leishmania (Viannia) braziliensis correlates with lack of gene amplification and drug resistance. Parasitology Research, v. 101, n. 3, p. 667-676, .

SEGATO, FERNANDO; DAMASIO, ANDRE R. L.; GONCALVES, THIAGO A.; DE LUCAS, ROSYMAR C.; SQUINA, FABIO M.; DECKER, STEPHEN R.; PRADE, ROLF A.. High-yield secretion of multiple client proteins in Aspergillus. Enzyme and Microbial Technology, v. 51, n. 2, p. 100-106, . Web of Science Citations: 37. (10/18198-3)

SEGATO, FERNANDO; DAMASIO, ANDRE R. L.; GONCALVES, THIAGO AUGUSTO; MURAKAMI, MARIO T.; SQUINA, FABIO M.; POLIZELI, MARIA DE LOURDES T. M.; MORT, ANDREW J.; PRADE, ROLF A.. Two structurally discrete GH7-cellobiohydrolases compete for the same cellulosic substrate fiber. BIOTECHNOLOGY FOR BIOFUELS, v. 5, . Web of Science Citations: 12. (10/18198-3)

SQUINA, FABIO MARCIO; PRADE, ROLF ALEXANDER; WANG, HONGLIANG; MURAKAMI, MARIO TYAGO. Expression, purification, crystallization and preliminary crystallographic analysis of an endo-1,5-alpha-L-arabinanase from hyperthermophilic Thermotoga petrophila. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, v. 65, n. 9, p. 902-905, . Web of Science Citations: 8. (08/58037-9)

LIBERATO, MARCELO VIZONA; PRATES, ERICA TEIXEIRA; GONCALVES, THIAGO AUGUSTO; BERNARDES, AMANDA; VILELA, NATHALIA; FATTORI, JULIANA; EMATSU, GABRIELA CRISTINA; CHINAGLIA, MARIANA; MACHI GOMES, EMERSON RODRIGO; MIGLIORINI FIGUEIRA, ANA CAROLINA; et al. Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds. Journal of Biological Chemistry, v. 296, . Web of Science Citations: 0. (17/22669-0, 13/08293-7, 13/15582-5, 14/04105-4, 17/16089-1, 17/08166-6, 15/50612-8)

TOMAZETTO, GEIZECLER; PIMENTEL, AGNES C.; WIBBERG, DANIEL; DIXON, NEIL; SQUINA, FABIO M.. Multi-omic Directed Discovery of Cellulosomes, Polysaccharide Utilization Loci, and Lignocellulases from an Enriched Rumen Anaerobic Consortium. Applied and Environmental Microbiology, v. 86, n. 18, . Web of Science Citations: 1. (18/23826-5, 15/50590-4, 15/23279-6, 16/01926-2)

TRAMONTINA, ROBSON; BRENELLI, LIVIA BEATRIZ; SODRE, VICTORIA; FRANCO CAIRO, JOAO PAULO; TRAVALIA, BEATRIZ MEDEIROS; EGAWA, VIVIANE YOSHIMI; GOLDBECK, ROSANA; SQUINA, FABIO MARCIO. Enzymatic removal of inhibitory compounds from lignocellulosic hydrolysates for biomass to bioproducts applications. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, v. 36, n. 11, . Web of Science Citations: 3. (18/18101-1, 16/07926-4, 15/50590-4, 20/03051-9, 17/15477-8)

TRAMONTINA, ROBSON; GALMAN, JAMES L.; PARMEGGIANI, FABIO; DERRINGTON, SASHA R.; BUGG, TIMOTHY D. H.; TURNER, NICHOLAS J.; SQUINA, FABIO M.; DIXON, NEIL. Consolidated production of coniferol and other high-value aromatic alcohols directly from lignocellulosic biomass. GREEN CHEMISTRY, v. 22, n. 1, p. 144-152, . Web of Science Citations: 9. (15/50590-4, 17/23754-1)

GRANATO, DANIELA C.; NEVES, LEANDRO X.; TRINO, LUCIANA D.; CARNIELLI, CAROLINA M.; LOPES, ARIANE F. B.; YOKOO, SAMI; PAULETTI, BIANCA A.; DOMINGUES, ROMENIA R.; SA, JAMILE O.; PERSINOTI, GABRIELLA; et al. Meta-omics analysis indicates the saliva microbiome and its proteins associated with the prognosis of oral cancer patients. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, v. 1869, n. 8, . Web of Science Citations: 0. (18/18496-6, 18/02180-0, 16/07846-0, 19/18751-9, 19/21815-9, 09/54067-3, 18/11958-4, 15/50590-4, 18/12194-8, 18/15728-3, 14/06485-9, 18/15535-0, 10/19278-0)

DE LUCAS, ROSYMAR COUTINHO; DE OLIVEIRA, TASSIO BRITO; LIMA, MATHEUS SANITA; PASIN, THIAGO MACHADO; DE ALMEIDA SCARCELLA, ANA SILVIA; COSTA RIBEIRO, LILIANE FRAGA; CARVALHO, CAIO; DE LIMA DAMASIO, ANDRE RICARDO; BUCKERIDGE, MARCOS SILVEIRA; PRADE, ROLF ALEXANDER; et al. The profile secretion of Aspergillus clavatus: Different pre-treatments of sugarcane bagasse distinctly induces holocellulases for the lignocellulosic biomass conversion into sugar. RENEWABLE ENERGY, v. 165, n. 1, p. 748-757, . Web of Science Citations: 0. (17/09000-4, 11/02169-7)

SODRE, VICTORIA; ARAUJO, JUSCEMACIA NASCIMENTO; GONCALVES, THIAGO AUGUSTO; VILELA, NATHALIA; KIMUS BRAZ, ANTONIO SERGIO; FRANCO, TELMA TEIXEIRA; NETO, MARIO DE OLIVEIRA; DE LIMA DAMASIO, ANDRE RICARDO; GARCIA, WANIUS; SQUINA, FABIO MARCIO. An alkaline active feruloyl-CoA synthetase from soil metagenome as a potential key enzyme for lignin valorization strategies. PLoS One, v. 14, n. 2, . Web of Science Citations: 1. (15/50612-8, 18/18101-1, 17/16089-1, 17/05901-7, 17/08166-6, 17/17275-3, 17/22669-0, 17/16976-8, 15/50590-4)

PERSINOTI, GABRIELA F.; PAIXAO, DOUGLAS A. A.; BUGG, TIMOTHY D. H.; SQUINA, FABIO M.. Genome Sequence of Lysinibacillus sphaericus, a Lignin-Degrading Bacterium Isolated from Municipal Solid Waste Soil. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, v. 6, n. 18, . Web of Science Citations: 0. (15/50590-4)

CONTESINI, FABIANO JARES; LIBERATO, MARCELO VIZONA; RUBIO, MARCELO VENTURA; CALZADO, FELIPE; ZUBIETA, MARIANE PALUDETTI; RIANO-PACHON, DIEGO MAURICIO; SQUINA, FABIO MARCIO; BRACHT, FABRICIO; SKAF, MUNIR S.; DAMASIO, ANDRE RICARDO. Structural and functional characterization of a highly secreted alpha-L-arabinofuranosidase (GH62) from Aspergillus nidulans grown on sugarcane bagasse. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, v. 1865, n. 12, p. 1758-1769, . Web of Science Citations: 6. (13/24988-5, 08/58037-9, 13/08293-7, 14/15403-6, 12/20549-4, 14/23051-2, 14/04105-4)

PUHL, ANA C.; PRATES, ERICA T.; ROSSETO, FLAVIO R.; MANZINE, LIVIA R.; STANKOVIC, IVANA; DE ARAUJO, SIMARA S.; ALVAREZ, THABATA M.; SQUINA, FABIO M.; SKAF, MUNIR S.; POLIKARPOV, IGOR. Crystallographic structure and molecular dynamics simulations of the major endoglucanase from Xanthomonas campestris pv. campestris shed light on its oligosaccharide products release pattern. International Journal of Biological Macromolecules, v. 136, p. 493-502, . Web of Science Citations: 0. (11/20505-4, 15/13684-0, 09/52840-7, 10/52362-5, 11/21608-1, 15/50590-4)

VALADARES, FERNANDA; GONCALVES, THIAGO A.; DAMASIO, ANDRE; MILAGRES, ADRIANE M. F.; SQUINA, FABIO M.; SEGATO, FERNANDO; FERRAZ, ANDRE. The secretome of two representative lignocellulose-decay basidiomycetes growing on sugarcane bagasse solid-state cultures. Enzyme and Microbial Technology, v. 130, . Web of Science Citations: 0. (17/16089-1, 15/50590-4, 14/06923-6)

COLUSSI, FRANCIELI; DA SILVA, VIVIAM M.; MILLER, IAN; COTA, JUNIO; DE OLIVEIRA, LEANDRO C.; DE OLIVEIRA NETO, MARIO; SQUINA, FABIO M.; GARCIA, WANIUS. Oligomeric state and structural stability of two hyperthermophilic beta-glucosidases from Thermotoga petrophila. Amino Acids, v. 47, n. 5, p. 937-948, . Web of Science Citations: 8. (08/58037-9, 12/03503-0, 11/13242-7, 12/21054-9)

DE OLIVEIRA, LEANDRO C.; DA SILVA, VIVIAM M.; COLUSSI, FRANCIELI; CABRAL, ALINE D.; DE OLIVEIRA NETO, MARIO; SQUINA, FABIO M.; GARCIA, WANIUS. Conformational Changes in a Hyperthermostable Glycoside Hydrolase: Enzymatic Activity Is a Consequence of the Loop Dynamics and Protonation Balance. PLoS One, v. 10, n. 2, . Web of Science Citations: 16. (08/58037-9, 12/03503-0, 11/13242-7, 12/21054-9)

BRAGATTO, J.; SEGATO, F.; SQUINA, F. M.. Production of xylooligosaccharides (XOS) from delignified sugarcane bagasse by peroxide-HAc process using recombinant xylanase from Bacillus subtilis. INDUSTRIAL CROPS AND PRODUCTS, v. 51, p. 123-129, . Web of Science Citations: 28. (08/58037-9)

ALVAREZ, THABATA M.; PAIVA, JOICE H.; RUIZ, DIEGO M.; CAIRO, JOAO PAULO L. F.; PEREIRA, ISABELA O.; PAIXAO, DOUGLAS A. A.; DE ALMEIDA, RODRIGO F.; TONOLI, CELISA C. C.; RULLER, ROBERTO; SANTOS, CAMILA R.; et al. Structure and Function of a Novel Cellulase 5 from Sugarcane Soil Metagenome. PLoS One, v. 8, n. 12, . Web of Science Citations: 21. (09/08312-6, 08/58037-9, 13/13309-0, 10/11469-1, 11/20977-3)

LIMA, CLEILTON S.; RABELO, SARITA C.; CIESIELSKI, PETER N.; ROBERTO, INES C.; ROCHA, GEORGE J. M.; DRIEMEIER, CARLOS. Multiscale Alterations in Sugar Cane Bagasse and Straw Submitted to Alkaline Deacetylation. ACS SUSTAINABLE CHEMISTRY & ENGINEERING, v. 6, n. 3, p. 3796-3804, . Web of Science Citations: 1. (15/50590-4)

HAHN SCHNEIDER, WILLIAN DANIEL; GONCALVES, THIAGO AUGUSTO; UCHIMA, CRISTIANE AKEMI; DOS REIS, LAISA; FONTANA, ROSELEI CLAUDETE; SQUINA, FABIO MARCIO; PINHEIRO DILLON, ALDO JOSE; CAMASSOLA, MARLI. Comparison of the production of enzymes to cell wall hydrolysis using different carbon sources by Penicillium echinulaturn strains and its hydrolysis potential for lignocelullosic biomass. Process Biochemistry, v. 66, p. 162-170, . Web of Science Citations: 2. (08/58037-9)

FRANCO CAIRO, JOAO P. L.; CARAZZOLLE, MARCELO F.; LEONARDO, FLAVIA C.; MOFATTO, LUCIANA S.; BRENELLI, LIVIA B.; GONCALVES, THIAGO A.; UCHIMA, CRISTIANE A.; DOMINGUES, ROMANIA R.; ALVAREZ, THABATA M.; TRAMONTINA, ROBSON; et al. Expanding the Knowledge on Lignocellulolytic and Redox Enzymes of Worker and Soldier Castes from the Lower Termite Coptotermes gestroi. FRONTIERS IN MICROBIOLOGY, v. 7, . Web of Science Citations: 8. (15/06971-3, 13/03061-0, 08/58037-9, 14/50371-8, 14/20576-7, 10/11469-1, 14/10351-8, 12/19040-0, 11/20977-3)

RUBIO, MARCELO VENTURA; ZUBIETA, MARIANE PALUDETTI; LOURENO FRANCO CAIRO, JOAO PAULO; CALZADO, FELIPE; PAES LEME, ADRIANA FRANCO; SQUINA, FABIO MARCIO; PRADE, ROLF ALEXANDER; DE LIMA DAMASIO, ANDRE RICARDO. Mapping N-linked glycosylation of carbohydrate-active enzymes in the secretome of Aspergillus nidulans grown on lignocellulose. BIOTECHNOLOGY FOR BIOFUELS, v. 9, . Web of Science Citations: 8. (14/23051-2, 14/15403-6, 14/06923-6, 09/54067-3, 11/20977-3, 12/20549-4, 13/24988-5)

BRAGATTO, J.; SEGATO, F.; SQUINA, F. M.. Production of xylooligosaccharides (XOS) from delignified sugarcane bagasse by peroxide-HAc process using recombinant xylanase from Bacillus subtilis. INDUSTRIAL CROPS AND PRODUCTS, v. 51, p. 123-129, . Web of Science Citations: 28. (08/58037-9)

SQUINA, FABIO MARCIO; PRADE, ROLF ALEXANDER; WANG, HONGLIANG; MURAKAMI, MARIO TYAGO. Expression, purification, crystallization and preliminary crystallographic analysis of an endo-1,5-alpha-L-arabinanase from hyperthermophilic Thermotoga petrophila. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, v. 65, n. 9, p. 902-905, . Web of Science Citations: 8. (08/58037-9)

Academic Publications

(References retrieved automatically from State of São Paulo Research Institutions)

ALVAREZ, Thabata Maria. Desenvolvimento de uma biblioteca de enzimas a partir de metagenoma de solo = : Library generation for biomass conversion enzymes from soil metagenome. Tese (Doutorado) -  Instituto de Biologia.  Universidade Estadual de Campinas (UNICAMP).  (10/11469-1

None

PAIVA, Lívia Beatriz Brenelli de. Application of chemical and biological approaches for lignin valorization = Aplicação de abordagens químicas e biológicas para valorização da lignina. Tese (Doutorado) -  Universidade Estadual de Campinas, Instituto de Biologia.  (13/03061-0

SANCHEZ, Camila Cristina. Estudos genômicos da expressão gênica global de "Aspergillus niger" crescido em bagaço e colmo de cana-de-açúcar = Global gene expression of "Aspergillus niger" grown on bagasse and culm of sugarcane. Dissertação (Mestrado) -  Centro Nacional de Pesquisa em Energia e Materiais (CNPEM). Ministério da Ciência, Tecnologia, Inovações e Comunicações (Brasil).  (13/09541-4

CAIRO, João Paulo Lourenço Franco. Investigação de vias de degradação de biomassa lignocelulósica no cupim Coptotermes gestroi complementares a hidrolases glicosídicas visando aplicação na produção de bioprodutos : Investigation of lignocellulosic degradation by the termite Coptotermes gestroi complementary to glycoside hydrolases aiming at the production of bioproducts. Tese (Doutorado) -  Universidade Estadual de Campinas, Instituto de Biologia.  (11/20977-3

HOFFMAM, Zaira Bruna. Estudos funcionais e estruturais de hemicelulases para potencial aplicação biotecnológica. Dissertação (Mestrado) -  Instituto de Biologia.  Universidade Estadual de Campinas (UNICAMP).  (11/14200-6

PIMENTEL, Agnes Cristina. Características bioquímicas e estruturais do domínio catalítico da celulase CelE2 e sua relação com o domínio acessório Calx-beta : Biochemical and structural features of the catalytic domain of cellulase CelE2 and its relation with the Calx-beta accessory domain. Dissertação (Mestrado) -  Centro Nacional de Pesquisa em Energia e Materiais (CNPEM). Ministério da Ciência, Tecnologia, Inovações e Comunicações (Brasil).  (16/01926-2

Patent applications

COMPOSIÇÃO DE ENZIMAS LIGNOCELULOLÍTICAS, MÉTODO DE CONVERSÃO ENZIMÁTICA E VETOR DE EXPRESSÃO DE UMA SUPERÓXIDO DISMUTASE BR1020150172567 - Centro Nacional de Pesquisa em Energia e Materiais (CNPEM); Universidade Estadual de Campinas (UNICAMP); Universidade Estadual Paulista (UNESP). Falsarella Carazzole; Fernanda Mandelli; Jose Geraldo Da Cruz Pradella; Thabata Maria Alvarez; Flávia Costa Leonardo; Fernando Ferreira Costa; Ana Maria Costa Leonardo; Robson Tramontina; Livia Beatriz Brenelli De Paiva; Thiago Augusto Gonçalves; Diogo Robl - July 2015, 20

COMPOSITION OF LIGNOCELLULOLYTIC ENZYMES, ENZYMATIC CONVERSION METHOD AND SUPEROXIDE DISMUTASE EXPRESSION VECTOR PCT/BR2016/000069 - Centro Nacional de Pesquisa em Energia e Materiais (CNPEM); Universidade Estadual de Campinas (UNICAMP); Universidade Estadual Paulista (UNESP). Gonçalo Amarante Guimarães Pereira; João Paulo Lourenço Cairo; Fábio Marcio Squina; Marcelo Falsarella Carazzole; Fernanda Mandelli; José Geraldo da Cruz Pradella; Thabata Maria Alvarez; Flávia Costa Leonardo; Fernando Ferreira Costa; Ana Maria Costa Leonardo; Robson Tramontina; Livia Beatriz Brenelli de Paiva; Thiago Augusto Gonçalves; Diogo Robl - July 2016, 18

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