Comparative phylogeography, phylogeny, paleoclimate modeling, and taxonomy of neotropical reptiles and amphibians

• Grant number: 11/50146-6
• Support Opportunities: BIOTA-FAPESP Program - Thematic Grants
• Start date: January 01, 2012
• End date: June 30, 2024
• Field of knowledge: Biological Sciences - Zoology - Taxonomy of Recent Groups
• Principal Investigator: Miguel Trefaut Urbano Rodrigues
• Grantee: Miguel Trefaut Urbano Rodrigues
• Host Institution: Instituto de Biociências (IB). Universidade de São Paulo (USP). São Paulo , SP, Brazil
• Pesquisadores principais: Yatiyo Yonenaga-Yassuda
• Associated scholarship(s): 22/03462-4 - Comparative phylogeography, phylogeny, paleoclimatic modeling, and taxonomy of Neotropical reptiles and amphibians, BP.TT; 19/00636-9 - Comparative phylogeography, phylogeny, paleoclimatic modeling, and taxonomy of Neotropical reptiles and amphibians, BP.TT; 18/17410-0 - Comparative phylogeography, phylogeny, paleoclimate modeling, and taxonomy of neotropical reptiles and amphibians, BP.TT; + associated scholarships 18/02544-1 - Comparative phylogeography, phylogeny, paleoclimatic modeling, and taxonomy of neotropical reptiles and amphibians, BP.TT; 17/15025-0 - Systematics of the genus Phyllodytes Wagler, 1830 (Anura: Hylidae: Lophyohylinae), based on morphological and molecular characters, and phylogeography of p. luteolus (Wied, 1824), BP.DR; 16/03146-4 - Unveiling geographical, ecological, and evolutionary relationships of a Neotropical species complex of unisexual lizards of genus Leposoma (Squamata: Gymnophthalmidae) through Ecological Niche Modeling, BP.PD; 15/12841-5 - Chemical characterization of epidermal, cloacal and preanal and femoral glands secretions of the Brazilian lizards species of Teiidae Family (Squamata), BP.DR; 15/01839-0 - Gymnodactylus phylogeography of the Atlantic Forest darwinii group (Squamata: Gekkota: Phyllodactylidae), BP.PD; 14/24431-3 - Phylogeny and systematic review of the species of the Bothrops jararacussu group (Squamata, Crotalinae) and phylogeography of B. jararacussu Lacerda, 1884, with biogeographic hypotheses test for the existence of past forest contact Amazon- Atlantic Forest, BP.DR; 13/22477-3 - Hybridization and mechanisms of reproductive isolation of Atlantic Forest lizards, BP.PD; 12/21213-0 - Review of Bothrops bilineata (Serpentes, Viperidae) based on morphological and molecular data, BP.MS; 12/15754-8 - Ecogeographical consequences of evolution of the snake-like morphotype in squamates, BP.PD; 12/01319-8 - Developmental mechanisms of limb reduction in Squamata, BP.PD; 12/10163-1 - Phylogeny and systematics of the lizards genus Leposoma gr. parietale (Squamata: Gymnophthalmidae), based on morphological and molecular characters, BP.DR; 12/02212-2 - Taxonomy, systematics and phylogeny the Cnemidophorus lemniscatus group (Squamata: Teiidae), based on morphological and molecular caracters, BP.PD; 12/09463-0 - Molecular differentiation and morphological variation in microteiid lizards of the tribe Iphisiini (Squamata, Gymnophthalmidae), BP.DR - associated scholarships

Abstract

Recent analyses of endemism and levels of antropic threat identified the so called hotspots targets for conservation. However, our knowledge about the origin and distribution of the biodiversity in those areas remains scarce. Such a deficiency limits our power of conservation with respect to the environmental changes caused by a man. One of the aims of this project is addressed to study the influence of Pleistocene climatic fluctuations of the herpetofauna and the levels of genetic diversity of frogs and lizards living in elevated and lowland regions of the Atlantic Forest. By combining special climatic modeling coupled to phylogeography, the project will be recording diversity patterns in an insufficiently studied, highly threatened and megadiverse region, bringing important contributions for the conservation of the remaining fragments of this hotspot. We will be also focusing on the role of mountains as areas favoring adaptive diversification of the herpetofauna, either as refuges to species adapted to cold climates during hot phases, or as evolutionary scenarios for ecogeographic speciation. We also proceed further our ongoing research with reptiles and amphibians from several Brazilian ecosystems under morphological, karyological, taxonomic, phylogenetic and phylogeographic approaches, contributing to a better understanding of their evolution and the biogeographic history of the continent. In a particular case we will be conducting a comparative phylogeographic study of a South American clade of lizards and its ecological equivalent in Africa in order to establish intercontinental correlations on their history and origin. The collections obtained in unsampled or little known areas in State of Sao Paulo and in other Brazilian ecosystems will improve the knowledge on our biodiversity, describing new rate which, associated to the phylogenetic and phylogeographic data obtained, will contribute to reevaluate conservation strategies to target species. (AU)

Scientific publications

(93)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

KOK, PHILIPPE J. R.; BITTENBINDER, MATYAS A.; VAN DEN BERG, JORIS K.; MARQUES-SOUZA, SERGIO; SALES NUNES, PEDRO M.; LAKING, ALEXANDRA E.; TEIXEIRA, JR., MAURO; FOUQUET, ANTOINE; MEANS, D. BRUCE; MACCULLOCH, ROSS D.; et al. Integrative taxonomy of the gymnophthalmid lizard Neusticurus rudis Boulenger, 1900 identifies a new species in the eastern Pantepui region, north-eastern South America. Journal of Natural History, v. 52, n. 13-16, SI, p. 1029-1066, 2018. (11/50146-6, 12/10163-1, 13/50297-0)

TEIXEIRA, JR., MAURO; PRATES, IVAN; NISA, CAROLINA; CAMARAO SILVA-MARTINS, NATHALIA SUZAN; STRUESSMANN, CHRISTINE; RODRIGUES, MIGUEL TREFAUT. Molecular data reveal spatial and temporal patterns of diversification and a cryptic new species of lowland Stenocercus Dumeril & Bibron, 1837 (Squamata: Tropiduridae). Molecular Phylogenetics and Evolution, v. 94, n. A, p. 410-423, JAN 2016. (13/50297-0, 03/10335-8, 11/50146-6)

GUERRA-FUENTES, RICARDO ARTURO; ROSCITO, JULIANA G.; SALES NUNES, PEDRO M.; OLIVEIRA-BASTOS, PRISCILLA RACHEL; ANTONIAZZI, MARTA MARIA; CARLOS, JARED; RODRIGUES, MIGUEL TREFAUT. Through the Looking Glass: The Spectacle in Gymnophthalmid Lizards. Anatomical Record-Advances in Integrative Anatomy and Evolutionary Biology, v. 297, n. 3, SI, p. 496-504, MAR 2014. (11/50146-6)

FONSECA, EMANUEL M.; GEHARA, MARCELO; WERNECK, FERNANDA P.; LANNA, FLAVIA M.; COLLI, GUARINO R.; SITES, JR., JACK W.; RODRIGUES, MIGUEL T.; GARDA, ADRIAN A.. Diversification with gene flow and niche divergence in a lizard species along the South American ``diagonal of open formations{''}. Journal of Biogeography, v. 45, n. 7, p. 1688-1700, JUL 2018. (13/50297-0, 03/10335-8, 11/50146-6)

BRUNES, TULIANA O.; LYRA, MARIANA L.; MALDONADO, JOSE A.; PELLEGRINO, KATIA C. M.; RODRIGUES, MIGUEL TREFAUT; FUJITA, MATTHEW K.. The first mitochondrial genome of a South America parthenogenetic lizard (Squamata: Gymnophthalmidae). MITOCHONDRIAL DNA PART B-RESOURCES, v. 6, n. 8, p. 2393-2395, AUG 3 2021. (16/03146-4, 13/50297-0, 11/50146-6, 18/07660-0)

SANCHEZ-PACHECO, SANTIAGO J.; TORRES-CARVAJAL, OMAR; AGUIRRE-PENAFIEL, VANESSA; SALES NUNES, PEDRO M.; VERRASTRO, LAURA; RIVAS, GILSON A.; RODRIGUES, MIGUEL T.; GRANT, TARAN; MURPHY, ROBERT W.. Phylogeny of Riama (Squamata: Gymnophthalmidae), impact of phenotypic evidence on molecular datasets, and the origin of the Sierra Nevada de Santa Marta endemic fauna. CLADISTICS, v. 34, n. 3, p. 260-291, JUN 2018. (12/10000-5, 03/10335-8, 11/50146-6)

OLIVEIRA, ELIANA F.; GEHARA, MARCELO; SAO-PEDRO, VINICIUS A.; CHEN, XIN; MYERS, EDWARD A.; BURBRINK, FRANK T.; MESQUITA, DANIEL O.; GARDA, ADRIAN A.; COLLI, GUARINO R.; RODRIGUES, MIGUEL T.; et al. Speciation with gene flow in whiptail lizards from a Neotropical xeric biome. Molecular Ecology, v. 24, n. 23, p. 5957-5975, DEC 2015. (11/50146-6, 12/02212-2)

DI-NIZO, CAMILLA BRUNO; VENTURA, KAREN; FERGUSON-SMITH, MALCOLM ANDREW; MARY O'BRIEN, PATRICIA CAROLINE; YONENAGA-YASSUDA, YATIYO; SILVA, MARIA JOSE DE J.. Comparative Chromosome Painting in Six Species of Oligoryzomys (Rodentia, Sigmodontinae) and the Karyotype Evolution of the Genus. PLoS One, v. 10, n. 2, FEB 6 2015. (05/04557-3, 10/03432-0, 11/50146-6)

WERNECK, FERNANDA P.; LEITE, RAFAEL N.; GEURGAS, SILVIA R.; RODRIGUES, MIGUEL T.. Biogeographic history and cryptic diversity of saxicolous Tropiduridae lizards endemic to the semiarid Caatinga. BMC Evolutionary Biology, v. 15, MAY 23 2015. (13/50297-0, 03/10335-8, 11/50146-6)

DAL VECHIO, FRANCISCO; PRATES, IVAN; GRAZZIOTIN, FELIPE G.; ZAHER, HUSSAM; RODRIGUES, MIGUEL TREFAUT. Phylogeography and historical demography of the arboreal pit viper Bothrops bilineatus (Serpentes, Crotalinae) reveal multiple connections between Amazonian and Atlantic rain forests. Journal of Biogeography, v. 45, n. 10, p. 2415-2426, OCT 2018. (11/50206-9, 03/10335-8, 11/50146-6)

PRATES, IVAN; PENNA, ANNA; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Local adaptation in mainland anole lizards: Integrating population history and genome-environment associations. ECOLOGY AND EVOLUTION, v. 8, n. 23, p. 11932-11944, DEC 2018. (13/50297-0, 03/10335-8, 11/50146-6)

DAL VECHIO, FRANCISCO; TEIXEIRA, JR., MAURO; SENA, MARCELO; ARGOLO, ANTONIO; GARCIA, CAROLINE; RODRIGUES, MIGUEL TREFAUT. Taxonomic Status and the Phylogenetic Placement of Amphisbaena leucocephala Peters, 1878 (Squamata, Amphisbaenidae). South American Journal of Herpetology, v. 11, n. 3, p. 157-175, DEC 2016. (03/10335-8, 11/50146-6)

GEHARA, MARCELO; CRAWFORD, ANDREW J.; ORRICO, VICTOR G. D.; RODRIGUEZ, ARIEL; LOETTERS, STEFAN; FOUQUET, ANTOINE; BARRIENTOS, LUCAS S.; BRUSQUETTI, FRANCISCO; DE LA RIVA, IGNACIO; ERNST, RAFFAEL; et al. High Levels of Diversity Uncovered in a Widespread Nominal Taxon: Continental Phylogeography of the Neotropical Tree Frog Dendropsophus minutus. PLoS One, v. 9, n. 9, SEP 10 2014. (12/12500-5, 08/50928-1, 03/10335-8, 11/50146-6, 10/51071-7)

FOUQUET, ANTOINE; LOEBMANN, DANIEL; CASTROVIEJO-FISHER, SANTIAGO; PADIAL, JOSE M.; ORRICO, VICTOR G. D.; LYRA, MARIANA L.; ROBERTO, IGOR JOVENTINO; KOK, PHILIPPE J. R.; HADDAD, CELIO F. B.; RODRIGUES, MIGUEL T.. From Amazonia to the Atlantic forest: Molecular phylogeny of Phyzelaphryninae frogs reveals unexpected diversity and a striking biogeographic pattern emphasizing conservation challenges. Molecular Phylogenetics and Evolution, v. 65, n. 2, p. 547-561, NOV 2012. (03/10335-8, 11/50146-6, 10/51071-7)

PRATES, IVAN; MELO-SAMPAIO, PAULO ROBERTO; DRUMMOND, LEANDRO DE OLIVEIRA; TEIXEIRA, JR., MAURO; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Biogeographic links between southern Atlantic Forest and western South America: Rediscovery, re-description, and phylogenetic relationships of two rare montane anole lizards from Brazil. Molecular Phylogenetics and Evolution, v. 113, p. 49-58, AUG 2017. (13/50297-0, 03/10335-8, 11/50146-6)

RECODER, RENATO; PRATES, IVAN; MARQUES-SOUZA, SERGIO; CAMACHO, AGUSTIN; NUNES, PEDRO M. SALES; DAL VECHIO, FRANCISCO; GHELLERE, JOSE MARIO; MCDIARMID, ROY W.; RODRIGUES, MIGUEL TREFAUT. Lizards from the Lost World: two new species and evolutionary relationships of the Pantepui highland Riolama (Gymnophthalmidae). ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. 190, n. 1, p. 271-297, SEP 2020. (13/50297-0, 12/15754-8, 11/50146-6)

LANNA, FLAVIA; WERNECK, FERNANDA; GEHARA, MARCELO; FONSECA, EMANUEL; COLLI, GUARINO; SITES, JR., JACK; RODRIGUES, MIGUEL; GARDA, ADRIAN. The evolutionary history of Lygodactylus lizards in the South American open diagonal. Molecular Phylogenetics and Evolution, v. 127, p. 638-645, OCT 2018. (13/50297-0, 03/10335-8, 11/50146-6)

ZAHER, HUSSAM; YANEZ-MUNOZ, MARIO H.; RODRIGUES, MIGUEL T.; GRABOSKI, ROBERTA; MACHADO, FABIO A.; ALTAMIRANO-BENAVIDES, MARCO; BONATTO, SANDRO L.; GRAZZIOTIN, FELIPE G.. Origin and hidden diversity within the poorly known Galapagos snake radiation (Serpentes: Dipsadidae). SYSTEMATICS AND BIODIVERSITY, v. 16, n. 7, p. 614-642, 2018. (02/13602-4, 07/52144-5, 11/50146-6, 12/24755-8)

PELOSO, PEDRO L. V.; DE OLIVEIRA, RENAN M.; STURARO, MARCELO J.; RODRIGUES, MIGUEL T.; LIMA-FILHO, GERALDO R.; BITAR, YOUSZEF O. C.; WHEELER, WARD C.; ALEIXO, ALEXANDRE. Phylogeny of Map Tree Frogs, Boana semilineata Species Group, with a New Amazonian Species (Anura: Hylidae). South American Journal of Herpetology, v. 13, n. 2, p. 150-169, AUG 2018. (03/10335-8, 11/50146-6)

STURARO, MARCELO JOSE; RODRIGUES, MIGUEL T.; COLLI, GUARINO R.; KNOWLES, L. LACEY; AVILA-PIRES, TERESA C. S.. Integrative taxonomy of the lizards Cercosaura ocellata species complex (Reptilia: Gymnophthalmidae). ZOOLOGISCHER ANZEIGER, v. 275, p. 37-65, JUL 2018. (13/50297-0, 03/10335-8, 11/50146-6)

MARQUES-SOUZA, SERGIO; MACHADO PELLEGRINO, KATIA C.; BRUNES, TULIANA OLIVEIRA; CARNAVAL, ANA CAROLINA; DAMASCENO, ROBERTA PACHECO; DE OLIVEIRA BORGES, MANOELA LIMA; GALLARDO, CARLOS CANDIA; RODRIGUES, MIGUEL TREFAUT. Hidden in the DNA: How multiple historical processes and natural history traits shaped patterns of cryptic diversity in an Amazon leaf-litter lizard Loxopholis osvaldoi (Squamata: Gymnophthalmidae). Journal of Biogeography, v. 47, n. 2, DEC 2019. (17/08357-6, 11/50146-6, 12/10163-1, 13/22477-3)

LANNA, FLAVIA M.; GEHARA, MARCELO; WERNECK, FERNANDA P.; FONSECA, EMANUEL M.; COLLI, GUARINO R.; SITES, JR., JACK W.; RODRIGUES, MIGUEL T.; GARDA, ADRIAN A.. Dwarf geckos and giant rivers: the role of the Sao Francisco River in the evolution of Lygodactylus klugei (Squamata: Gekkonidae) in the semi-arid Caatinga of north-eastern Brazil. Biological Journal of the Linnean Society, v. 129, n. 1, p. 88-98, JAN 2020. (11/50146-6)

RIVERA, DANIELLE; PRATES, IVAN; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Effects of climate and geography on spatial patterns of genetic structure in tropical skinks. Molecular Phylogenetics and Evolution, v. 143, FEB 2020. (03/10335-8, 11/50146-6, 13/50297-0)

MARTINS, LIDIA F.; CHOUERI, ERIK L.; OLIVEIRA, ALAN F. S.; DOMINGOS, FABRICIUS M. C. B.; CAETANO, GABRIEL H. O.; CAVALCANTE, VITOR H. G. L.; LEITE, RAFAEL N.; FOUQUET, ANTOINE; RODRIGUES, MIGUEL T.; CARNAVAL, ANA C.; et al. hiptail lizard lineage delimitation and population expansion as windows into the history of Amazonian open ecosystem. SYSTEMATICS AND BIODIVERSITY, v. 19, n. 8, JUL 2021. (11/50146-6)

MELO-SAMPAIO, PAULO R.; PRATES, IVAN; PELOSO, PEDRO L. V.; RECODER, RENATO; DAL VECHIO, FRANCISCO; MARQUES-SOUZA, SERGIO; RODRIGUES, MIGUEL T.. A new nurse frog from Southwestern Amazonian highlands, with notes on the phylogenetic affinities of Allobates alessandroi (Aromobatidae). Journal of Natural History, v. 54, n. 1-4, p. 20-pg., 2020-03-01. (11/50146-6, 13/50297-0)

DIAS, IURI R.; NOVAES-E-FAGUNDES, GABRIEL; MOLLO NETO, ANTONIO; ZINA, JULIANA; GARCIA, CAROLINE; RECODER, RENATO SOUSA; DAL VECHIO, FRANCISCO; RODRIGUES, MIGUEL TREFAUT; SOLE, MIRCO. A new large canopy-dwelling species of Phyllodytes Wagler, 1930 (Anura, Hylidae) from the Atlantic Forest of the state of Bahia, Northeastern Brazil. PeerJ, v. 8, JUN 23 2020. (11/50146-6, 17/15025-0)

CARVALHO, THIAGO R.; FOUQUET, ANTOINE; LYRA, MARIANA L.; GIARETTA, ARIOVALDO A.; COSTA-CAMPOS, C. EDUARDO; RODRIGUES, MIGUEL T.; HADDAD, CELIO F. B.; RON, SANTIAGO R.. Species diversity and systematics of the Leptodactylus melanonotus group (Anura, Leptodactylidae): review of diagnostic traits and a new species from the Eastern Guiana Shield. SYSTEMATICS AND BIODIVERSITY, v. 20, n. 1, p. 31-pg., 2022-07-22. (12/15763-7, 03/10335-8, 18/17118-8, 18/03428-5, 11/50146-6, 17/08489-0)

MARQUES-SOUZA, SERGIO; PELLEGRINO, KATIA CRISTINA M.; BRUNES, TULIANA O.; ROJAS-RUNJAIC, FERNANDO J. M.; RODRIGUES, MIGUEL TREFAUT. A molecular perspective on the systematics and distribution of Loxopholis lizards in South and Central America, with advances on the biogeography of the tribe Ecpleopodini (Gymnophthalmidae: Squamata). SYSTEMATICS AND BIODIVERSITY, v. 20, n. 1, p. 14-pg., 2022-12-31. (17/08357-6, 11/50146-6, 12/10163-1, 16/03146-4)

MACHADO PELLEGRINO, KATIA CRISTINA; BRUNES, TULIANA OLIVEIRA; SOUZA, SERGIO MARQUES; LAGUNA, MARCIA MARIA; SAUER AVILA-PIRES, TERESA CRISTINA; HOOGMOED, MARINUS STEVEN; RODRIGUES, MIGUEL TREFAUT. On the distinctiveness of Amapasaurus, its relationship with Loxopholis Cope 1869, and description of a new genus for L. guianensis and L. hoogmoedi (Gymnophthalmoidea/Ecpleopodini: Squamata). Zootaxa, v. 4441, n. 2, p. 332-346, JUN 27 2018. (13/50297-0, 03/10335-8, 11/50146-6, 12/10163-1, 16/03146-4)

PELOSO, PEDRO L. V.; FROST, DARREL R.; RICHARDS, STEPHEN J.; RODRIGUES, MIGUEL T.; DONNELLAN, STEPHEN; MATSUI, MASAFUMI; RAXWORTHY, CRISTOPHER J.; BIJU, S. D.; LEMMON, EMILY MORIARTY; LEMMON, ALAN R.; et al. The impact of anchored phylogenomics and taxon sampling on phylogenetic inference in narrow-mouthed frogs (Anura, Microhylidae). CLADISTICS, v. 32, n. 2, p. 113-140, APR 2016. (03/10335-8, 11/50146-6)

CAMACHO, AGUSTIN; RECODER, RENATO; TEIXEIRA, JR., MAURO; KOHLSDORF, TIANA; RODRIGUES, MIGUEL TREFAUT; LEE, MICHAEL S. Y.. Overcoming phylogenetic and geographic uncertainties to test for correlates of range size evolution in gymnophthalmid lizards. ECOGRAPHY, v. 40, n. 6, p. 764-773, JUN 2017. (13/50297-0, 12/15754-8, 03/10335-8, 11/18868-1, 11/50146-6)

PIRANI, RENATA M.; WERNECK, FERNANDA P.; THOMAZ, ANDREA T.; KENNEY, MARIAH L.; STURARO, MARCELO J.; AVILA-PIRES, TERESA C. S.; PELOSO, PEDRO L. V.; RODRIGUES, MIGUEL T.; LACEY KNOWLES, L.. Testing main Amazonian rivers as barriers across time and space within widespread taxa. Journal of Biogeography, v. 46, n. 11, p. 2444-2456, NOV 2019. (13/50297-0, 14/22444-0, 11/50146-6)

CARVALHO, THIAGO R. D.; MORAES, LEANDRO J. C. L.; LIMA, ALBERTINA P.; FOUQUET, ANTOINE; PELOSO, V, PEDRO L.; PAVAN, DANTE; DRUMMOND, LEANDRO O.; RODRIGUES, MIGUEL T.; GIARETTA, ARIOVALDO A.; GORDO, MARCELO; et al. Systematics and historical biogeography of Neotropical foam-nesting frogs of the Adenomera heyeri clade (Leptodactylidae), with the description of six new Amazonian species. ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. 191, n. 2, p. 395-433, FEB 2021. (03/10335-8, 11/50146-6, 13/50741-7, 17/08489-0, 15/13404-8)

DAMASCENO, ROBERTA P.; CARNAVAL, ANA CAROLINA; SASS, CHODON; RECODER, RENATO SOUSA; MORITZ, CRAIG; RODRIGUES, MIGUEL TREFAUT. Geographic restriction, genetic divergence, and morphological disparity in the Brazilian Atlantic Forests: Insights from Leposoma lizards (Gymnophthalmidae, Squamata). Molecular Phylogenetics and Evolution, v. 154, JAN 2021. (03/10335-8, 11/50146-6, 15/11498-5, 13/50297-0, 13/22477-3)

DE MELLO, ANNA V. ALBANO; RECODER, RENATO S.; FOUQUET, ANTOINE; RODRIGUES, MIGUEL T.; NUNES, PEDRO M. S.. Integrative taxonomy of the Iphisa elegans  Gray, 1851 species complex (Squamata: Gymnophthalmidae) leads to the description of five new species. ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. N/A, p. 28-pg., 2023-09-11. (12/09463-0, 11/50146-6)

PIRANI, RENATA M.; PELOSO, V, PEDRO L.; PRADO, JOYCE R.; POLO, ERICO M.; KNOWLES, L. LACEY; RON, SANTIAGO R.; RODRIGUES, MIGUEL T.; STURARO, MARCELO J.; WERNECK, FERNANDA P.. Diversification history of clown tree frogs in Neotropical rainforests (Anura, Hylidae, Dendropsophus leucophyllatus group). Molecular Phylogenetics and Evolution, v. 150, SEP 2020. (03/10335-8, 11/50146-6, 13/50297-0, 14/22444-0)

PAZ, ANDREA; BROWN, JASON L.; CORDEIRO, CARLOS L. O.; AGUIRRE-SANTORO, JULIAN; ASSIS, CLAYDSON; AMARO, RENATA CECILIA; RAPOSO DO AMARAL, FABIO; BOCHORNY, THUANE; BACCI, LUCAS F.; CADDAH, MAYARA K.; et al. Environmental correlates of taxonomic and phylogenetic diversity in the Atlantic Forest. Journal of Biogeography, v. 48, n. 6, MAR 2021. (11/50143-7, 13/50297-0, 03/10335-8, 11/50146-6, 18/03428-5, 11/50225-3, 17/26162-8, 11/23155-4)

COSTA, JOAO C. L.; GRABOSKI, ROBERTA; GRAZZIOTIN, FELIPE G.; ZAHER, HUSSAM; RODRIGUES, MIGUEL T.; PRUDENTE, ANA LUCIA DA C.. Reassessing the systematics of Leptodeira (Serpentes, Dipsadidae) with emphasis in the South American species. ZOOLOGICA SCRIPTA, v. 51, n. 4, p. 19-pg., 2022-04-28. (11/50206-9, 03/10335-8, 16/50127-5, 11/50146-6)

GRABOSKI, ROBERTA; GRAZZIOTIN, FELIPE G.; MOTT, TAML; RODRIGUES, MIGUEL TREFAUT. The phylogenetic position of ridley?s worm lizard reveals the complex biogeographic history of New World insular amphisbaenids. Molecular Phylogenetics and Evolution, v. 173, p. 13-pg., 2022-08-01. (16/06866-8, 12/24755-8, 16/50127-5, 11/50146-6)

DUBEUX, MARCOS J. M.; GONCALVES, UBIRATAN; PALMEIRA, CRISTIANE N. S.; NUNES, PEDRO M. S.; CASSIMIRO, JOSE; GAMBLE, TONY; WERNECK, FERNANDA P.; RODRIGUES, MIGUEL T.; MOTT, TAMI. Two new species of geckos of the genus Phyllopezus Peters, 1878 (Squamata: Gekkota: Phyllodactylidae) from northeastern Brazil. Zootaxa, v. 5120, n. 3, p. 28-pg., 2022-03-28. (03/10335-8, 11/50146-6)

TEIXEIRA, MAURO, JR.; PRATES, IVAN; NISA, CAROLINA; CAMARAO SILVA-MARTINS, NATHALIA SUZAN; STRUESSMANN, CHRISTINE; RODRIGUES, MIGUEL TREFAUT. Molecular data reveal spatial and temporal patterns of diversification and a cryptic new species of lowland Stenocercus Dumeril & Bibron, 1837 (Squamata: Tropiduridae). Molecular Phylogenetics and Evolution, v. 94, p. 14-pg., 2016-01-01. (13/50297-0, 11/50146-6, 03/10335-8)

STRANGAS, MARIA L.; NAVAS, CARLOS A.; RODRIGUES, MIGUEL T.; CARNAVAL, ANA C.. Thermophysiology, microclimates, and species distributions of lizards in the mountains of the Brazilian Atlantic Forest. ECOGRAPHY, v. 42, n. 2, p. 11-pg., 2019-02-01. (08/57687-0, 13/50297-0, 11/50146-6, 03/10335-8)

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PRATES, IVAN; XUE, ALEXANDER T.; BROWN, JASON L.; ALVARADO-SERRANO, DIEGO F.; RODRIGUES, MIGUEL T.; HICKERSON, MICHAEL J.; CARNAVAL, ANA C.. Inferring responses to climate dynamics from historical demography in neotropical forest lizards. Proceedings of the National Academy of Sciences of the United States of America, v. 113, n. 29, p. 7978-7985, JUL 19 2016. (13/50297-0, 03/10335-8, 11/50146-6)

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PRATES, IVAN; RIVERA, DANIELLE; RODRIGUES, MIGUEL T.; CARNAVAL, ANA C.. A mid-Pleistocene rainforest corridor enabled synchronous invasions of the Atlantic Forest by Amazonian anole lizards. Molecular Ecology, v. 25, n. 20, p. 5174-5186, OCT 2016. (13/50297-0, 03/10335-8, 11/50146-6)

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CURCIO, FELIPE FRANCO; SCALI, STEFANO; RODRIGUES, MIGUEL TREFAUT. TAXONOMIC STATUS OF ERYTHROLAMPRUS BIZONA JAN (1863) (SERPENTES, XENODONTINAE): ASSEMBLING A PUZZLE WITH MANY MISSING PIECES. HERPETOLOGICAL MONOGRAPHS, v. 29, p. 40-64, 2015. (11/50146-6)

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PAZ, A.; SPANOS, Z.; BROWN, J. L.; LYRA, M.; HADDAD, C.; RODRIGUES, M.; CARNAVAL, A.. Phylogeography of Atlantic Forest glassfrogs (Vitreorana): when geography, climate dynamics and rivers matter. HEREDITY, v. 122, n. 5, p. 545-557, MAY 2019. (13/50297-0, 03/10335-8, 14/50342-8, 11/50146-6, 13/50741-7)

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