Detection of patterns and anomalies in medical data using Mathematical Modeling

• Grant number: 18/06228-7
• Support Opportunities: Scholarships in Brazil - Post-Doctoral
• Start date: May 01, 2018
• End date: April 30, 2021
• Field of knowledge: Physical Sciences and Mathematics - Computer Science - Computing Methodologies and Techniques
• Principal Investigator: Agma Juci Machado Traina
• Grantee: Bruno Squizato Faiçal
• Host Institution: Instituto de Ciências Matemáticas e de Computação (ICMC). Universidade de São Paulo (USP). São Carlos , SP, Brazil
• Associated research grant: 16/17078-0 - Mining, indexing and visualizing Big Data in clinical decision support systems (MIVisBD), AP.TEM

Abstract

This postdoctoral research project aims at investigating the following question: How can we discover useful and needed patterns in large datasets of electronic health records and present this information to healthcare providers in an easy and succinct way? The hypothesis of this project is that mathematical models supported by data mining algorithms are effective tools to detect and to explain hidden patterns in Electronic Health Record (HER) datasets. We intend to use visualization methods to convey the results to the specialists in the field. (AU)

Scientific publications

(8)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

CLEMENTINO, JOSE M., JR.; FAICAL, BRUNO S.; BONES, CHRISTIAN C.; TRAINA, CAETANO, JR.; GUTIERREZ, MARCO A.; TRAINA, AGMA J. M.; ALMEIDA, JR; GONZALEZ, AR; SHEN, L; KANE, B; et al. Multilevel Clustering Explainer: An Explainable Approach to Electronic Health Records. 2021 IEEE 34TH INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS (CBMS), v. N/A, p. 6-pg., 2021-01-01. (20/07200-9, 16/17078-0, 18/06074-0, 19/04660-1, 18/06228-7)

CLEMENTINO JR, JOSE M.; BONES, CHRISTIAN C.; FAICAL, BRUNO S.; LINARES, OSCAR C.; LIMA, DANIEL M.; GUTIERREZ, MARCO A.; TRAINA JR, CAETANO; TRAINA, AGMA J. M.; DEHERRERA, AGS; GONZALEZ, AR; et al. Bag-of-Attributes Representation: a Vector Space Model for Electronic Health Records Analysis in OMOP. 2020 IEEE 33RD INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS(CBMS 2020), v. N/A, p. 6-pg., 2020-01-01. (18/06228-7, 16/17078-0, 20/07200-9, 19/04660-1, 18/06074-0)

ZABOT, GUILHERME F.; CAZZOLATO, MIRELA T.; SCABORA, LUCAS C.; FAICAL, BRUNO S.; TRAINA, AGMA J. M.; TRAINA, CAETANO, JR.; IEEE. UCORM: Indexing Uncorrelated Metric Spaces for Concise Content-Based Retrieval of Medical Images. 2019 IEEE 32ND INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS (CBMS), v. N/A, p. 6-pg., 2019-01-01. (18/24414-2, 16/17078-0, 18/06228-7, 16/17330-1)

RAMOS, JONATHAN S.; CAZZOLATO, MIRELA T.; FAICAL, BRUNO S.; NOGUEIRA-BARBOSA, MARCELLO H.; TRAINA, CAETANO, JR.; TRAINA, AGMA J. M.; IEEE. 3DBGrowth: volumetric vertebrae segmentation and reconstruction in magnetic resonance imaging. 2019 IEEE 32ND INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS (CBMS), v. N/A, p. 6-pg., 2019-01-01. (18/24414-2, 17/23780-2, 18/06228-7, 16/17078-0)

LINARES, OSCAR CUADROS; SORIANO-VARGAS, AUREA AUREA; FAICAL, BRUNO S.; HAMANN, BERND; FABRO, ALEXANDRE T.; TRAINA, AGMA J. M.; DEHERRERA, AGS; GONZALEZ, AR; SANTOSH, KC; TEMESGEN, Z; et al. Efficient Segmentation of Cell Nuclei in Histopathological Images. 2020 IEEE 33RD INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS(CBMS 2020), v. N/A, p. 6-pg., 2020-01-01. (16/17078-0, 18/06228-7, 18/06074-0, 20/07200-9)

FREITAS, HEITOR; FAICAL, BRUNO S.; CARDOSO E SILVA, ALEF VINICIUS; UEYAMA, JO. Use of UAVs for an efficient capsule distribution and smart path planning for biological pest control. COMPUTERS AND ELECTRONICS IN AGRICULTURE, v. 173, JUN 2020. (13/07375-0, 18/17335-9, 18/06228-7)

LINARES, OSCAR CUADROS; FAICAL, BRUNO S.; BARBOSA, PAULO RENATO C.; HAMANN, BERND; FABRO, ALEXANDRE T.; TRAINA, AGMA J. M.; IEEE. How to Automatically Identify Regions of Interest in High-resolution Images of Lung Biopsy for Interstitial Fibrosis Diagnosis. 2019 IEEE 32ND INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS (CBMS), v. N/A, p. 4-pg., 2019-01-01. (16/17078-0, 18/06228-7, 18/06074-0)

RAMOS, JONATHAN S.; CAZZOLATO, MIRELA T.; FAICAL, BRUNO S.; LINARES, OSCAR A. C.; NOGUEIRA-BARBOSA, MARCELLO H.; TRAINA, CAETANO, JR.; TRAINA, AGMA J. M.; IEEE. Fast and smart segmentation of paraspinal muscles in magnetic resonance imaging with CleverSeg. 2019 32ND SIBGRAPI CONFERENCE ON GRAPHICS, PATTERNS AND IMAGES (SIBGRAPI), v. N/A, p. 8-pg., 2019-01-01. (18/24414-2, 16/17078-0, 17/23780-2, 18/06228-7)