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Dimensions US-BIOTA São Paulo: a multidisciplinary framework for biodiversity prediction in the Brazilian Atlantic forest hotspot

Grant number: 13/50297-0
Support Opportunities:BIOTA-FAPESP Program - Thematic Grants
Duration: September 01, 2013 - February 28, 2023
Field of knowledge:Biological Sciences - Biology
Convênio/Acordo: NSF - Dimensions of Biodiversity and BIOTA
Principal Investigator:Cristina Yumi Miyaki
Grantee:Cristina Yumi Miyaki
Principal researcher abroad: Ana Carolina O. Queiroz Carnaval
Institution abroad: City University of New York, New York (CUNY), United States
Host Institution: Instituto de Biociências (IB). Universidade de São Paulo (USP). São Paulo , SP, Brazil
Pesquisadores principais:
Francisco William da Cruz Junior ; Ricardo Pinto da Rocha
Associated scholarship(s):17/25720-7 - Comparative phylogeography of montane bird species from southern Atlantic Forest: Integrating evolutionary and ecological traits in the study of community assemblage, BP.PD
17/01211-6 - Population genomics and historical demography of Atlantic Forest birds: a hypothesis test of regugia and the role of altitudinal distribution in phylogeography, BP.MS
15/25325-5 - Evolution of the arachnids of the order Opiliones from Brazilian Atlantic rain forest: a survey from population to high taxonomical level (Arachnida, Opiliones, Gonyleptidae), BE.PQ
+ associated scholarships 15/14327-7 - Paleoclimate and calibration study of karst system in central Brazil: implication for paleoclimate studies based on speleothem records, BP.PD
14/10914-2 - Fauna exchange between the Amazonian and Atlantic Forests: phylogeny and biogeography of the genera Xipholena and Cotinga (Passeriformes: Cotingidae) based on thousands of loci, BP.PD
13/24645-0 - Hybrid zone and comparative historical demography of three species of birds in a contact zone in the Atlantic Forest, BP.DR
13/23736-2 - Alpha, beta, functional and phylogenetic diversity of opilions in the Atlantic Forest: patterns and relationships with ecological and historical factors, BP.PD
12/08576-6 - Malaria parasites of a widespread suboscine antbird in South America: assessing the influence of geographic distance and host phylogeography on the prevalence, diversity, and community organization of parasites within and across biogeographic regions, BP.PD - associated scholarships
Articles published in Pesquisa FAPESP Magazine about the research grant:
The rain that united two forests 
Para entender el origen de la selva 
Seeking to understand the origin of the forest 
Articles published in Agência FAPESP Newsletter about the research grant:
Articles published in other media outlets (0 total):
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Scientific publications (208)
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
ANDRÉ VICTOR LUCCI FREITAS; EDUARDO PROENÇA BARBOSA; KEITH RICHARD WILLMOTT; NIKLAS WAHLBERG; GERARDO LAMAS. `Species' from two different butterfly genera combined into one: description of a new genus of Euptychiina (Nymphalidae: Satyrinae) with unusually variable wing pattern. Revista Brasileira de Entomologia, v. 60, n. 2, p. 157-165, . (13/50297-0, 11/50225-3, 12/50260-6, 12/03750-8)
RIVERA, DANIELLE; PRATES, IVAN; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Effects of climate and geography on spatial patterns of genetic structure in tropical skinks. Molecular Phylogenetics and Evolution, v. 143, . (03/10335-8, 11/50146-6, 13/50297-0)
ROSA, AUGUSTO H. B.; HUERTAS, BLANCA; WILLMOTT, KEITH R.; BARBOSA, EDUARDO P.; MACHADO, PATRICIA A.; MIELKE, OLAF H. H.; CANAAN, CARLOS H. P.; FREITAS, ANDRE V. L.. Fifty years without a name: a new species of Splendeuptychia Forster (Lepidoptera: Nymphalidae: Satyrinae). Zootaxa, v. 5061, n. 1, p. 95-114, . (13/50297-0, 16/15873-8, 18/21432-0, 12/03750-8, 11/50225-3)
PINZON MORALES, CONCHITA A.; PINTO-DA-ROCHA, RICARDO. Two new Colombian harvestmen of the genus Quindina Roewer, 1914 (Opiliones: Nomoclastidae). Zootaxa, v. 4748, n. 3, p. 531-547, . (13/50297-0)
DAMASCENO, ROBERTA P.; CARNAVAL, ANA CAROLINA; SASS, CHODON; RECODER, RENATO SOUSA; MORITZ, CRAIG; RODRIGUES, MIGUEL TREFAUT. Geographic restriction, genetic divergence, and morphological disparity in the Brazilian Atlantic Forests: Insights from Leposoma lizards (Gymnophthalmidae, Squamata). Molecular Phylogenetics and Evolution, v. 154, . (03/10335-8, 11/50146-6, 15/11498-5, 13/50297-0, 13/22477-3)
DEININGER, MICHAEL; WARD, BRITTANY MARIE; NOVELLO, VALDIR F.; CRUZ, FRANCISCO W.. Late Quaternary Variations in the South American Monsoon System as Inferred by Speleothems-New Perspectives Using the SISAL Database. QUATERNARY, v. 2, n. 1, . (18/12285-3, 13/50297-0, 16/15807-5, 17/50085-3)
LOURENCO, G. M.; LUNA, P.; GUEVARA, R.; DATTILO, W.; FREITAS, A. V. L.; RIBEIRO, S. P.. Temporal shifts in butterfly diversity: responses to natural and anthropic forest transitions. JOURNAL OF INSECT CONSERVATION, v. 24, n. 2, . (11/50225-3, 13/50297-0)
BIANCALANA, RENATA NEVES; DO AMARAL, FABIO RAPOSO; BIONDO, CIBELE. Novel microsatellites for Cypseloides fumigatus, cross-amplifiable in Streptoprocne zonaris. REVISTA BRASILEIRA DE ORNITOLOGIA, v. 27, n. 3, p. 207-211, . (11/50143-7, 13/50297-0, 11/23155-4)
NAKAHARA, SHINICHI; MATOS-MARAVI, PAVEL; BARBOSA, EDUARDO P.; WILLMOTT, KEITH R.; LAMAS, GERARDO; FREITAS, ANDRE V. L.. Two New Species of Taygetina With a Possible Case of `Juxta Loss' in Butterflies (Lepidoptera: Nymphalidae: Satyrinae). INSECT SYSTEMATICS AND DIVERSITY, v. 3, n. 6, . (11/50225-3, 12/50260-6, 13/50297-0, 16/15873-8)
MORAES, SIMEAO S.; MONTEBELLO, YGOR; STANTON, MARIANA A.; YAMAGUCHI, LYDIA FUMIKO; KATO, MASSUO J.; FREITAS, ANDRE V. L.. Description of three new species of Geometridae (Lepidoptera) using species delimitation in an integrative taxonomy approach for a cryptic species complex. PeerJ, v. 9, . (11/50225-3, 13/50297-0, 19/02727-1, 15/26823-9, 15/17047-5, 16/20196-5, 12/50260-6)
PIRANI, RENATA M.; WERNECK, FERNANDA P.; THOMAZ, ANDREA T.; KENNEY, MARIAH L.; STURARO, MARCELO J.; AVILA-PIRES, TERESA C. S.; PELOSO, PEDRO L. V.; RODRIGUES, MIGUEL T.; LACEY KNOWLES, L.. Testing main Amazonian rivers as barriers across time and space within widespread taxa. Journal of Biogeography, v. 46, n. 11, p. 2444-2456, . (13/50297-0, 14/22444-0, 11/50146-6)
XUE, ALEXANDER T.; HICKERSON, MICHAEL J.. Comparative phylogeographic inference with genome-wide data from aggregated population pairs. Evolution, . (13/50297-0)
GOMEZ-BAHAMON, VALENTINA; MARQUEZ, ROBERTO; JAHN, ALEX E.; MIYAKI, CRISTINA YUMI; TUERO, DIEGO T.; LAVERDE-R, OSCAR; RESTREPO, SILVIA; DANIEL CADENA, CARLOS. Speciation Associated with Shifts in Migratory Behavior in an Avian Radiation. Current Biology, v. 30, n. 7, p. 1312+, . (13/50297-0, 12/17225-2)
FREITAS, A. V. L.; FRANCINI, R. B.; MIELKE, O. H. H.; ROSA, A. H. B.; MAGALDI, L. M.; SILVA-BRANDAO, K. L.. A New and Rare Actinote Hubner (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini) from Southeastern Brazil. Neotropical Entomology, v. 49, n. 5, p. 696-703, . (11/50225-3, 15/24663-4, 13/50297-0)
MAGALDI, LUIZA MORAES; KAMINSKI, LUCAS AUGUSTO; SERAPHIM, NOEMY; AZEREDO-ESPIN, ANA MARIA; SILVA-BRANDA, KARINA LUCAS; FREITAS, ANDRE VICTOR LUCCI. Hidden in the wing dots: Disentangling mimetic sister species of butterflies (Riodinidae: Stalachtis) with an integrative approach. ZOOLOGISCHER ANZEIGER, v. 294, p. 92-99, . (11/50225-3, 12/16266-7, 12/50260-6, 13/50297-0, 15/24663-4, 10/51340-8)
LOURENCO, GISELLE M.; DATTILO, WESLEY; RIBEIRO, SERVIO P.; FREITAS, ANDRE V. L.. iological Aspects and Movements of Neotropical Fruit-Feeding Butterflie. Neotropical Entomology, v. 51, n. 1, . (13/50297-0)
MARQUARDT, GISELE C.; BICUDO, DENISE C.; BICUDO, CARLOS E. DE M.; LEDRU, MARIE-PIERRE; ECTOR, LUC; WETZEL, CARLOS E.. Pseudostaurosira crateri sp. nov. (Fragilariaceae, Bacillariophyta), a new small araphid, fossil diatom species from the Pleistocene (Atlantic Forest, Brazil). PHYTOTAXA, v. 496, n. 2, p. 105-120, . (17/50341-0, 13/50297-0)
BROWN, JASON L.; HILL, DANIEL J.; DOLAN, AISLING M.; CARNAVAL, ANA C.; HAYWOOD, ALAN M.. PaleoClim, high spatial resolution paleoclimate surfaces for global land areas. SCIENTIFIC DATA, v. 5, . (13/50297-0)
PERES, ELEN ARROYO; DASILVA, MARCIO BERNARDINO; ANTUNES, JR., MANUEL; PINTO-DA-ROCHA, RICARDO. A short-range endemic species from south-eastern Atlantic Rain Forest shows deep signature of historical events: phylogeography of harvestmen Acutisoma longipes (Arachnida: Opiliones). SYSTEMATICS AND BIODIVERSITY, v. 16, n. 2, p. 171-187, . (13/50297-0, 12/02969-6)
PERES, ELEN ARROYO; BENEDETTI, ALIPIO REZENDE; HIRUMA, SILVIO TAKASHI; SOBRAL-SOUZA, THADEU; PINTO-DA-ROCHA, RICARDO. Phylogeography of Sodreaninae harvestmen (Arachnida: Opiliones: Gonyleptidae): Insights into the biogeography of the southern Brazilian Atlantic Forest. Molecular Phylogenetics and Evolution, v. 138, p. 1-16, . (13/50297-0)
GAINETT, GUILHERME; SHARMA, PRASHANT P.; FERNANDES, NATHALIA; PINTO-DA-ROCHA, RICARDO; GIRIBET, GONZALO; WILLEMART, RODRIGO HIRATA. Evolution of a sensory cluster on the legs of Opiliones (Arachnida) informs multi-level phylogenetic relationships. ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. 187, n. 1, p. 143-165, . (10/00915-0, 13/23189-1, 13/50297-0, 14/07671-0, 15/01518-9)
MACEDO, GABRIEL; SILVA, MARCO; DO AMARAL, FABIO RAPOSO; MALDONADO-COELHO, MARCOS. Symmetrical discrimination despite weak song differentiation in 2 suboscine bird sister species. BEHAVIORAL ECOLOGY, v. 30, n. 5, p. 1205-1215, . (16/11439-1, 15/18287-0, 13/50297-0, 11/23155-4, 11/50143-7)
PINAYA, JORGE L. D.; CRUZ, FRANCISCO W.; CECCANTINI, GREGORIO C. T.; CORREA, PEDRO L. P.; PITMAN, NIGEL; VEMADO, FELIPE; LOPEZ, MARIA DEL C. ARMEN S.; PEREIRA FILHO, AUGUSTO J.; GROHMANN, CARLOS H.; CHIESSI, CRISTIANO M.; et al. Brazilian montane rainforest expansion induced by Heinrich Stadial 1 event. SCIENTIFIC REPORTS, v. 9, . (15/50683-2, 16/04982-0, 13/50297-0, 17/50085-3)
EATON, DEREN A. R.; OVERCAST, ISAAC. ipyrad: Interactive assembly and analysis of RADseq datasets. Bioinformatics, v. 36, n. 8, p. 2592-2594, . (13/50297-0)
TRUJILLO-ARIAS, NATALIA; JOSE RODRIGUEZ-CAJARVILLE, MARIA; SARI, ELOISA; MIYAKI, CRISTINA Y.; SANTOS, FABRICIO R.; WITT, CHRISTOPHER C.; BARREIRA, ANA S.; GOMEZ, ISABEL; NAOKI, KAZUYA; TUBARO, PABLO L.; et al. Evolution between forest macrorefugia is linked to discordance between genetic and morphological variation in Neotropical passerines. Molecular Phylogenetics and Evolution, v. 149, . (13/50297-0)
RECODER, RENATO SOUSA; DAL VECHIO, FRANCISCO; MARQUES-SOUZA, SERGIO; TEIXEIRA, JR., MAURO; SILVA-DA-SILVA, MAIUME; SANTOS, JR., ALFREDO P.; RIBEIRO, SIRIA; BARRIO-AMOROS, CESAR; RODRIGUES, MIGUEL TREFAUT. Geographic variation and taxonomy of red-tailed Gymnophthalmus (Squamata: Gymnophthalmidae) from Amazonian Savannas. Zootaxa, v. 4497, n. 1, p. 61-81, . (13/50297-0, 03/10335-8, 12/09463-0, 17/08357-6)
GARCIA, GUILHERME P. B.; GROHMANN, CARLOS H.. DEM-based geomorphological mapping and landforms characterization of a tropical karst environment in southeastern Brazil. Journal of South American Earth Sciences, v. 93, p. 14-22, . (16/06628-0, 13/50297-0)
KOK, PHILIPPE J. R.; BITTENBINDER, MATYAS A.; VAN DEN BERG, JORIS K.; MARQUES-SOUZA, SERGIO; SALES NUNES, PEDRO M.; LAKING, ALEXANDRA E.; TEIXEIRA, JR., MAURO; FOUQUET, ANTOINE; MEANS, D. BRUCE; MACCULLOCH, ROSS D.; et al. Integrative taxonomy of the gymnophthalmid lizard Neusticurus rudis Boulenger, 1900 identifies a new species in the eastern Pantepui region, north-eastern South America. Journal of Natural History, v. 52, n. 13-16, SI, p. 1029-1066, . (11/50146-6, 12/10163-1, 13/50297-0)
POTTER, SALLY; XUE, ALEXANDER T.; BRAGG, JASON G.; ROSAUER, DAN F.; ROYCROFT, EMILY J.; MORITZ, CRAIG. Pleistocene climatic changes drive diversification across a tropical savanna. Molecular Ecology, v. 27, n. 2, p. 520-532, . (13/50297-0)
FONSECA, LUIZ HENRIQUE M.; LOHMANN, LUCIA G.. A new species of Adenocalymma (Bignonieae, Bignoniaceae) from Minas Gerais, Brazil. BRITTONIA, v. 71, n. 2, p. 183-189, . (11/50859-2, 13/50297-0, 12/50260-6)
BRUNES, TULIANA O.; DA SILVA, ANDRE JUSTINO; MARQUES-SOUZA, SERGIO; RODRIGUES, MIGUEL T.; PELLEGRINO, KATIA C. M.. Not always young: The first vertebrate ancient origin of true parthenogenesis found in an Amazon leaf litter lizard with evidence of mitochondrial haplotypes surfing on the wave of a range expansion. Molecular Phylogenetics and Evolution, v. 135, p. 105-122, . (13/50297-0, 03/10335-8, 12/10163-1, 16/03146-4)
MACIEL, FERNANDA DE GOES; RUFO, DANILO AQUEU; KEUROGHLIAN, ALEXINE; RUSSO, ANNA CAROLINA; BRANDT, NATHALIA MORESCHI; VIEIRA, NATALY FERNANDES; DA NOBREGA, BRUNA MOURA; NAVA, ALESSANDRA; NARDI, MARCELLO SCHIAVO; DE ALMEIDA JACOMO, ANAH TEREZA; et al. Genetic diversity and population structure of white-lipped peccaries (Tayassu pecari) in the Pantanal, Cerrado and Atlantic Forest from Brazil. Mammalian Biology, v. 95, p. 85-92, . (09/12989-1, 13/50297-0, 15/20133-0)
XUE, ALEXANDER T.; RUGGIERO, ROBERT P.; HICKERSON, MICHAEL J.; BOISSINOT, STEPHANE. Differential Effect of Selection against LINE Retrotransposons among Vertebrates Inferred from Whole-Genome Data and Demographic Modeling. GENOME BIOLOGY AND EVOLUTION, v. 10, n. 5, p. 1265-1281, . (13/50297-0)
MELO-SAMPAIO, PAULO R.; DE OLIVEIRA, RENAN M.; PRATES, IVAN. A New Nurse Frog from Brazil (Aromobatidae: Allobates), with Data on the Distribution and Phenotypic Variation of Western Amazonian Species. South American Journal of Herpetology, v. 13, n. 2, p. 131-149, . (13/50297-0)
STURARO, MARCELO JOSE; RODRIGUES, MIGUEL T.; COLLI, GUARINO R.; KNOWLES, L. LACEY; AVILA-PIRES, TERESA C. S.. Integrative taxonomy of the lizards Cercosaura ocellata species complex (Reptilia: Gymnophthalmidae). ZOOLOGISCHER ANZEIGER, v. 275, p. 37-65, . (13/50297-0, 03/10335-8, 11/50146-6)
ZACCA, THAMARA; CASAGRANDE, MIRNA M.; MIELKE, OLAF. H. H.; HUERTAS, BLANCA; BARBOSA, EDUARDO P.; FREITAS, ANDRE V. L.; MAGALDI, LUIZA M.; ESPELAND, MARIANNE; NAKAHARA, SHINICHI; WILLMOTT, KEITH R.. Systematics of the butterfly genus Cissia Doubleday, 1848 (Lepidoptera: Nymphalidae: Satyrinae) using an integrative approach. ARTHROPOD SYSTEMATICS & PHYLOGENY, v. 76, n. 2, p. 349-376, . (11/50225-3, 13/50297-0, 17/02264-6, 12/50260-6, 16/15873-8)
THOM, GREGORY; DO AMARAL, FABIO RAPOSO; HICKERSON, MICHAEL J.; ALEIXO, ALEXANDRE; ARAUJO-SILVA, LUCAS E.; RIBAS, CAMILA C.; CHOUERI, ERIK; MIYAKI, CRISTINA Y.. Phenotypic and Genetic Structure Support Gene Flow Generating Gene Tree Discordances in an Amazonian Floodplain Endemic Species. Systematic Biology, v. 67, n. 4, p. 700-718, . (14/00113-2, 12/50260-6, 15/12551-7, 13/50297-0, 11/23155-4, 11/50143-7)
XUE, ALEXANDER T.; HICKERSON, MICHAEL J.. Comparative phylogeographic inference with genome-wide data from aggregated population pairs. Evolution, v. 74, n. 5, p. 808-830, . (13/50297-0)
BATALHA-FILHO, HENRIQUE; MALDONADO-COELHO, MARCOS; MIYAKI, CRISTINA YUMI. Historical climate changes and hybridization shaped the evolution of Atlantic Forest spinetails (Aves: Furnariidae). HEREDITY, v. 123, n. 5, p. 675-693, . (13/50297-0, 08/05705-4)
RECODER, RENATO; PRATES, IVAN; MARQUES-SOUZA, SERGIO; CAMACHO, AGUSTIN; NUNES, PEDRO M. SALES; DAL VECHIO, FRANCISCO; GHELLERE, JOSE MARIO; MCDIARMID, ROY W.; RODRIGUES, MIGUEL TREFAUT. Lizards from the Lost World: two new species and evolutionary relationships of the Pantepui highland Riolama (Gymnophthalmidae). ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. 190, n. 1, p. 271-297, . (13/50297-0, 11/50146-6, 12/15754-8)
PIRANI, RENATA M.; PELOSO, V, PEDRO L.; PRADO, JOYCE R.; POLO, ERICO M.; KNOWLES, L. LACEY; RON, SANTIAGO R.; RODRIGUES, MIGUEL T.; STURARO, MARCELO J.; WERNECK, FERNANDA P.. Diversification history of clown tree frogs in Neotropical rainforests (Anura, Hylidae, Dendropsophus leucophyllatus group). Molecular Phylogenetics and Evolution, v. 150, . (03/10335-8, 11/50146-6, 13/50297-0, 14/22444-0)
FREITAS, A. V. L.; ROSA, A. H. B.; NOBRE, C. E. B.; MELO, D. H. A.; MOTA, L. L.; SILVA-BRANDAO, K. L.; MACHADO, P. A.; CARREIRA, J. Y. O.. Immature Stages, Natural History, Systematics and Conservation of an Endangered Neotropical Butterfly: the Case ofScada karschina delicata(Nymphalidae: Ithomiini). Neotropical Entomology, . (13/50297-0, 11/50225-3)
BARBOSA, EDUARDO P.; AGUIAR, TAMARA M. C.; ROSA, AUGUSTO H. B.; ZACCA, THAMARA; FREITAS, ANDRE V. L.. A new species of butterfly (Lepidoptera: Nymphalidae) from the highlands of Southeastern Brazil. Zootaxa, v. 4819, n. 1, p. 128-142, . (17/02264-6, 11/50225-3, 12/50260-6, 13/50297-0)
LANNA, FLAVIA; WERNECK, FERNANDA; GEHARA, MARCELO; FONSECA, EMANUEL; COLLI, GUARINO; SITES, JR., JACK; RODRIGUES, MIGUEL; GARDA, ADRIAN. The evolutionary history of Lygodactylus lizards in the South American open diagonal. Molecular Phylogenetics and Evolution, v. 127, p. 638-645, . (13/50297-0, 03/10335-8, 11/50146-6)
PRATES, IVAN; PENNA, ANNA; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Local adaptation in mainland anole lizards: Integrating population history and genome-environment associations. ECOLOGY AND EVOLUTION, v. 8, n. 23, p. 11932-11944, . (13/50297-0, 03/10335-8, 11/50146-6)
NOGUEIRA, ANDRE DO AMARAL; BRAGAGNOLO, CIBELE; DASILVA, MARCIO BERNARDINO; CARVALHO, LEONARDO SOUSA; BENEDETTI, ALIPIO REZENDE; PINTO-DA-ROCHA, RICARDO. Spatial variation in phylogenetic diversity of communities of Atlantic Forest harvestmen (Opiliones, Arachnida). Insect Conservation and Diversity, v. 12, n. 5, p. 414-426, . (13/23736-2, 13/50297-0)
ANDRÉ V.L. FREITAS; LUÍSA L. MOTA; THAMARA ZACCA; EDUARDO P. BARBOSA. Description of a new and highly distinctive genus and species of Euptychiina (Lepidoptera: Nymphalidae: Satyrinae) from the Brazilian southern Amazon. Revista Brasileira de Entomologia, v. 63, n. 3, p. 254-261, . (11/50225-3, 16/15873-8, 13/50297-0, 17/02264-6)
BENAVIDES, LIGIA R.; PINTO-DA-ROCHA, RICARDO; GIRIBET, GONZALO. The Phylogeny and Evolution of the Flashiest of the Armored Harvestmen (Arachnida: Opiliones). Systematic Biology, v. 70, n. 4, p. 648-659, . (13/50297-0)
BRUNES, TULIANA O.; LYRA, MARIANA L.; MALDONADO, JOSE A.; PELLEGRINO, KATIA C. M.; RODRIGUES, MIGUEL TREFAUT; FUJITA, MATTHEW K.. The first mitochondrial genome of a South America parthenogenetic lizard (Squamata: Gymnophthalmidae). MITOCHONDRIAL DNA PART B-RESOURCES, v. 6, n. 8, p. 2393-2395, . (16/03146-4, 13/50297-0, 11/50146-6, 18/07660-0)
PAZ, ANDREA; BROWN, JASON L.; CORDEIRO, CARLOS L. O.; AGUIRRE-SANTORO, JULIAN; ASSIS, CLAYDSON; AMARO, RENATA CECILIA; RAPOSO DO AMARAL, FABIO; BOCHORNY, THUANE; BACCI, LUCAS F.; CADDAH, MAYARA K.; et al. Environmental correlates of taxonomic and phylogenetic diversity in the Atlantic Forest. Journal of Biogeography, v. 48, n. 6, . (17/26162-8, 11/50225-3, 11/23155-4, 11/50146-6, 13/50297-0, 18/03428-5, 03/10335-8, 11/50143-7)
OVERCAST, ISAAC; RUFFLEY, MEGAN; ROSINDELL, JAMES; HARMON, LUKE; BORGES, V, PAULO A.; EMERSON, BRENT C.; ETIENNE, RAMPAL S.; GILLESPIE, ROSEMARY; KREHENWINKEL, HENRIK; MAHLER, D. LUKE; et al. A unified model of species abundance, genetic diversity, and functional diversity reveals the mechanisms structuring ecological communities. MOLECULAR ECOLOGY RESOURCES, v. 21, n. 8, SI, . (13/50297-0)
DEMOS, TERRENCE C.; PETERHANS, JULIAN C. KERBIS; JOSEPH, TYLER A.; ROBINSON, JOHN D.; AGWANDA, BERNARD; HICKERSON, MICHAEL J.. Comparative Population Genomics of African Montane Forest Mammals Support Population Persistence across a Climatic Gradient and Quaternary Climatic Cycles. PLoS One, v. 10, n. 9, . (13/50297-0)
DO AMARAL, FABIO RAPOSO; NEVES, LEANDRO G.; RESENDE, JR., MARCIO F. R.; MOBILI, FLAVIA; MIYAKI, CRISTINA Y.; PELLEGRINO, KATIA C. M.; BIONDO, CIBELE. Ultraconserved Elements Sequencing as a Low-Cost Source of Complete Mitochondrial Genomes and Microsatellite Markers in Non-Model Amniotes. PLoS One, v. 10, n. 9, . (13/50297-0, 11/23155-4)
BRAGAGNOLO, CIBELE; HARA, MARCOS R.; PINTO-DA-ROCHA, RICARDO. A new family of Gonyleptoidea from South America (Opiliones, Laniatores). Zoological Journal of the Linnean Society, v. 173, n. 2, p. 296-319, . (13/50297-0, 09/17206-5, 12/02969-6, 08/06604-7)
DE MEDEIROS, MARIA CLAUDIA M. P.; LOHMANN, LUCIA G.. Two new species of Tynanthus Miers (Bignonieae, Bignoniaceae) from Brazil. PHYTOKEYS, v. 42, p. 77-85, . (11/50859-2, 13/50297-0, 12/50260-6, 10/51579-0)
FRANCOSO, ELAINE; ZUNTINI, ALEXANDRE RIZZO; CARNAVAL, ANA CAROLINA; ARIAS, MARIA CRISTINA. Comparative phylogeography in the Atlantic forest and Brazilian savannas: pleistocene fluctuations and dispersal shape spatial patterns in two bumblebees. BMC Evolutionary Biology, v. 16, . (10/20548-2, 13/03961-1, 09/07124-1, 13/50297-0, 13/12530-4)
ZACCA, THAMARA; PALUCH, MARLON; SIEWERT, RICARDO; FREITAS, ANDRE; BARBOSA, EDUARDO; MIELKE, OLAF; CASAGRANDE, MIRNA. Revision of Godartiana Forster (Lepidoptera: Nymphalidae), with the description of a new species from northeastern Brazil. AUSTRAL ENTOMOLOGY, v. 56, n. 2, p. 169-190, . (12/03750-8, 13/50297-0, 11/50225-3)
NAKAHARA, S.; BARBOSA, E. P.; FREITAS, A. V. L.. A Potentially Endangered New Species of Euptychia Hubner, 1818 (Lepidoptera: Nymphalidae: Satyrinae) from the Atlantic Coastal Forest of Brazil. Neotropical Entomology, v. 46, n. 3, p. 302-309, . (12/03750-8, 13/50297-0, 11/50225-3)
PRATES, IVAN; MELO-SAMPAIO, PAULO ROBERTO; DRUMMOND, LEANDRO DE OLIVEIRA; TEIXEIRA, JR., MAURO; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Biogeographic links between southern Atlantic Forest and western South America: Rediscovery, re-description, and phylogenetic relationships of two rare montane anole lizards from Brazil. Molecular Phylogenetics and Evolution, v. 113, p. 49-58, . (13/50297-0, 03/10335-8, 11/50146-6)
APAESTEGUI, JAMES; CRUZ, FRANCISCO WILLIAM; VUILLE, MATHIAS; FOHLMEISTER, JENS; CARLO ESPINOZA, JHAN; SIFEDDINE, ABDELFETTAH; STRIKIS, NICOLAS; GUYOT, JEAN LOUP; VENTURA, ROBERTO; CHENG, HAI; et al. Precipitation changes over the eastern Bolivian Andes inferred from speleothem (delta O-18) records for the last 1400 years. Earth and Planetary Science Letters, v. 494, p. 124-134, . (13/50297-0, 12/50260-6)
MACHADO, CAROLINA BARROS; GALETTI, JR., PEDRO MANOEL; CARNAVAL, ANA CAROLINA. Bayesian analyses detect a history of both vicariance and geodispersal in Neotropical freshwater fishes. Journal of Biogeography, v. 45, n. 6, p. 1313-1325, . (13/50297-0, 10/52315-7)
GROHMANN, CARLOS H.. Evaluation of TanDEM-X DEMs on selected Brazilian sites: Comparison with SRTM, ASTER GDEM and ALOS AW3D30. REMOTE SENSING OF ENVIRONMENT, v. 212, p. 121-133, . (16/06628-0, 13/50297-0, 12/50260-6)
TALAVERA, GERARD; KAMINSKI, LUCAS A.; FREITAS, ANDRE V. L.; VILA, ROGER. One-note samba: the biogeographical history of the relict Brazilian butterfly Elkalyce cogina. Journal of Biogeography, v. 43, n. 4, p. 727-737, . (11/50225-3, 13/50297-0, 12/50260-6)
BATALHA-FILHO, HENRIQUE; MIYAKI, CRISTINA Y.. Late Pleistocene divergence and postglacial expansion in the Brazilian Atlantic Forest: multilocus phylogeography of Rhopias gularis (Aves: Passeriformes). JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH, v. 54, n. 2, p. 137-147, . (08/05705-4, 13/50297-0)
CAMACHO, AGUSTIN; RECODER, RENATO; TEIXEIRA, JR., MAURO; KOHLSDORF, TIANA; RODRIGUES, MIGUEL TREFAUT; LEE, MICHAEL S. Y.. Overcoming phylogenetic and geographic uncertainties to test for correlates of range size evolution in gymnophthalmid lizards. ECOGRAPHY, v. 40, n. 6, p. 764-773, . (11/18868-1, 11/50146-6, 13/50297-0, 12/15754-8, 03/10335-8)
CORONATO-RIBEIRO, AMANDA; PINTO-DA-ROCHA, RICARDO. Taxonomic revision and cladistic analysis of the genus Metalibitia Roewer, 1912 (Opiliones, Cosmetidae, Cosmetinae). Zootaxa, v. 4291, n. 2, p. 201-242, . (13/50297-0)
ISLER, MORTON L.; MALDONADO-COELHO, MARCOS. Calls distinguish species of Antbirds (Aves: Passeriformes: Thamnophilidae) in the genus Pyriglena. Zootaxa, v. 4291, n. 2, p. 275-294, . (13/50297-0, 15/18287-0)
CAMACHO, AGUSTIN; RUSCH, TRAVIS W.. Methods and pitfalls of measuring thermal preference and tolerance in lizards. Journal of Thermal Biology, v. 68, n. A, p. 63-72, . (13/50297-0, 15/01300-3, 12/15754-8)
PINTO-DA-ROCHA, RICARDO; ANDRADE, RENATA; MORENO-GONZALEZ, JAIRO A.. Two new cave-dwelling genera of short-tailed whip-scorpions from Brazil (Arachnida: Schizomida: Hubbardiidae). Zoologia, v. 33, n. 2, . (13/50297-0)
MONTEIRO, YAGO FERRO; PINTO-DA-ROCHA, RICARDO. Revision of the genus Ferkeria Roewer, 1947, with the description of a new species (Opiliones: Laniatores: Cosmetidae). Zootaxa, v. 4006, n. 2, p. 361-373, . (13/50297-0)
BARBOSA, EDUARDO P.; SILVA, ANA K.; PALUCH, MARLON; AZEREDO-ESPIN, ANA MARIA L.; FREITAS, ANDRE V. L.. Uncovering the hidden diversity of the Neotropical butterfly genus Yphthimoides Forster (Nymphalidae: Satyrinae): description of three new species based on morphological and molecular data. ORGANISMS DIVERSITY & EVOLUTION, v. 15, n. 3, p. 577-589, . (12/03750-8, 13/50297-0, 11/50225-3)
NACER, DEBORAH F.; DO AMARAL, FABIO RAPOSO. Striking pseudogenization in avian phylogenetics: Numts are large and common in falcons. Molecular Phylogenetics and Evolution, v. 115, p. 1-6, . (13/50297-0, 11/50143-7, 11/23155-4)
GU, FANG; ZONNEVELD, KARIN A. F.; CHIESSI, CRISTIANO M.; ARZ, HELGE W.; PAETZOLD, JUERGEN; BEHLING, HERMANN. Long-term vegetation, climate and ocean dynamics inferred from a 73,500 years old marine sediment core (GeoB2107-3) off southern Brazil. QUATERNARY SCIENCE REVIEWS, v. 172, p. 55-71, . (12/17517-3, 13/50297-0)
LUCCI FREITAS, ANDRE VICTOR; FRANCINI, RONALDO BASTOS; PALUCH, MARLON; BARBOSA, EDUARDO PROENCA. A new species of Actinote Hubner (Nymphalidae: Heliconiinae: Acraeini) from southeast Brazil. Revista Brasileira de Entomologia, v. 62, n. 2, p. 135-147, . (12/03750-8, 11/50225-3, 13/50297-0, 16/15873-8)
FONSECA, EMANUEL M.; GEHARA, MARCELO; WERNECK, FERNANDA P.; LANNA, FLAVIA M.; COLLI, GUARINO R.; SITES, JR., JACK W.; RODRIGUES, MIGUEL T.; GARDA, ADRIAN A.. Diversification with gene flow and niche divergence in a lizard species along the South American ``diagonal of open formations{''}. Journal of Biogeography, v. 45, n. 7, p. 1688-1700, . (13/50297-0, 03/10335-8, 11/50146-6)
MACHADO PELLEGRINO, KATIA CRISTINA; BRUNES, TULIANA OLIVEIRA; SOUZA, SERGIO MARQUES; LAGUNA, MARCIA MARIA; SAUER AVILA-PIRES, TERESA CRISTINA; HOOGMOED, MARINUS STEVEN; RODRIGUES, MIGUEL TREFAUT. On the distinctiveness of Amapasaurus, its relationship with Loxopholis Cope 1869, and description of a new genus for L. guianensis and L. hoogmoedi (Gymnophthalmoidea/Ecpleopodini: Squamata). Zootaxa, v. 4441, n. 2, p. 332-346, . (11/50146-6, 13/50297-0, 12/10163-1, 16/03146-4, 03/10335-8)
KURY, ADRIANO B.; PINTO-DA-ROCHA, RICARDO; GRUBER, JURGEN; CARVALHO, RAFAEL N.. Clarification of three species of Discocyrtus Holmberg, 1878 with convoluted taxonomic histories (Opiliones: Laniatores: Gonyleptidae: Pachylinae). JOURNAL OF ARACHNOLOGY, v. 46, n. 2, p. 355-369, . (13/50297-0, 12/02969-6)
DOS SANTOS, JESSIE PEREIRA; ISERHARD, CRISTIANO AGRA; OLIVEIRA CARREIRA, JUNIA YASMIN; LUCCI FREITAS, ANDRE VICTOR. Monitoring fruit-feeding butterfly assemblages in two vertical strata in seasonal Atlantic Forest: temporal species turnover is lower in the canopy. JOURNAL OF TROPICAL ECOLOGY, v. 33, n. 5, p. 345-355, . (11/50225-3, 13/50297-0, 11/08433-8)
DIAS, FERNANDO M. S.; SIEWERT, RICARDO R.; FREITAS, ANDRE V. L.; LAMAS, GERARDO; MAGALDI, LUIZA M.; MIELKE, OLAF H. H.; CASAGRANDE, MIRNA M.. An integrative approach elucidates the systematics of Sea Hayward and Cybdelis Boisduval (Lepidoptera: Nymphalidae: Biblidinae). Systematic Entomology, v. 44, n. 1, p. 226-250, . (11/50225-3, 13/50297-0, 12/50260-6)
OVERCAST, ISAAC; EMERSON, BRENT C.; HICKERSON, MICHAEL J.. An integrated model of population genetics and community ecology. Journal of Biogeography, v. 46, n. 4, p. 816-829, . (13/50297-0)
ESPELAND, MARIANNE; BREINHOLT, JESSE W.; BARBOSA, EDUARDO P.; CASAGRANDE, MIRNA M.; HUERTAS, BLANCA; LAMAS, GERARDO; MARIN, MARIO A.; MIELKE, OLAF H. H.; MILLER, JACQUELINE Y.; NAKAHARA, SHINICHI; et al. Four hundred shades of brown: Higher level phylogeny of the problematic Euptychiina (Lepidoptera, Nymphalidae, Satyrinae) based on hybrid enrichment data. Molecular Phylogenetics and Evolution, v. 131, p. 116-124, . (11/50225-3, 12/50260-6, 14/16481-0, 13/50297-0, 16/15873-8)
BIANCALANA, RENATA NEVES; BIONDO, CIBELE; DO AMARAL, FABIO RAPOSO. The mitochondrial genome of the sooty swift (Cypseloides fumigatus). MITOCHONDRIAL DNA PART B-RESOURCES, v. 2, p. 198-200, . (13/50297-0, 11/50143-7, 11/23155-4)
BURBRINK, FRANK T.; CHAN, YVONNE L.; MYERS, EDWARD A.; RUANE, SARA; SMITH, BRIAN TILSTON; HICKERSON, MICHAEL J.. Asynchronous demographic responses to Pleistocene climate change in Eastern Nearctic vertebrates. ECOLOGY LETTERS, v. 19, n. 12, p. 1457-1467, . (13/50297-0)
NAKAHARA, S.; BARBOSA, E. P.; MARIN, M. A.; FREITAS, A. V. L.; POMERANTZ, T.; WILLMOTT, K. R.. Graphita gen. nov., a New Genus for Neonympha griphe C. Felder & R. Felder, 1867 (Lepidoptera, Nymphalidae, Satyrinae). Neotropical Entomology, v. 45, n. 6, p. 675-691, . (11/50225-3, 12/50260-6, 14/16481-0, 13/50297-0, 12/03750-8)
CABANNE, GUSTAVO S.; CALDERON, LUCIANO; TRUJILLO ARIAS, NATALIA; FLORES, PAMELA; PESSOA, RODRIGO; D'HORTA, FERNANDO M.; MIYAKI, CRISTINA Y.. Effects of Pleistocene climate changes on species ranges and evolutionary processes in the Neotropical Atlantic Forest. Biological Journal of the Linnean Society, v. 119, n. 4, p. 856-872, . (13/50297-0)
WALTARI, ERIC; SCHROEDER, RONNY; MCDONALD, KYLE; ANDERSON, ROBERT P.; CARNAVAL, ANA. Bioclimatic variables derived from remote sensing: assessment and application for species distribution modelling. METHODS IN ECOLOGY AND EVOLUTION, v. 5, n. 10, p. 1033-1042, . (13/50297-0, 12/50260-6)
PINTO-DA-ROCHA, RICARDO; DA FONSECA-FERREIRA, RAFAEL; BICHUETTE, MARIA ELINA. A new highly specialized cave harvestman from Brazil and the first blind species of the genus: landumoema smeagol sp n. (Arachnida, Opiliones, Gonyleptidae). ZOOKEYS, n. 537, p. 79-95, . (13/50297-0, 12/02969-6)
PINTO-DA-ROCHA, RICARDO; BRAGAGNOLO, CIBELE. Cladistic analysis of the family Nomoclastidae with descriptions of a new genus and eight new species (Opiliones, Laniatores). INVERTEBRATE SYSTEMATICS, v. 31, n. 1, p. 91-123, . (13/50297-0)
SVENSSON-COELHO, M.; SILVA, G. T.; SANTOS, S. S.; MIRANDA, L. S.; ARAUJO-SILVA, L. E.; RICKLEFS, R. E.; MIYAKI, C. Y.; MALDONADO-COELHO, M.. Lower Detection Probability of Avian Plasmodium in Blood Compared to Other Tissues. Journal of Parasitology, v. 102, n. 5, p. 559-561, . (13/50297-0, 12/08576-6)
TEIXEIRA, JR., MAURO; PRATES, IVAN; NISA, CAROLINA; CAMARAO SILVA-MARTINS, NATHALIA SUZAN; STRUESSMANN, CHRISTINE; RODRIGUES, MIGUEL TREFAUT. Molecular data reveal spatial and temporal patterns of diversification and a cryptic new species of lowland Stenocercus Dumeril & Bibron, 1837 (Squamata: Tropiduridae). Molecular Phylogenetics and Evolution, v. 94, n. A, p. 410-423, . (13/50297-0, 03/10335-8, 11/50146-6)
DASILVA, MARCIO BERNARDINO; PINTO-DA-ROCHA, RICARDO; DESOUZA, ADRIANO MEDEIROS. A protocol for the delimitation of areas of endemism and the historical regionalization of the Brazilian Atlantic Rain Forest using harvestmen distribution data. CLADISTICS, v. 31, n. 6, p. 692-705, . (13/50297-0)
WERNECK, FERNANDA P.; LEITE, RAFAEL N.; GEURGAS, SILVIA R.; RODRIGUES, MIGUEL T.. Biogeographic history and cryptic diversity of saxicolous Tropiduridae lizards endemic to the semiarid Caatinga. BMC Evolutionary Biology, v. 15, . (13/50297-0, 03/10335-8, 11/50146-6)
ANDRÉ VICTOR LUCCI FREITAS; RONALDO BASTOS FRANCINI; MÁRLON PALUCH; EDUARDO PROENÇA BARBOSA. A new species of Actinote Hübner (Nymphalidae: Heliconiinae: Acraeini) from southeast Brazil. Revista Brasileira de Entomologia, v. 62, n. 2, p. 135-147, . (11/50225-3, 16/15873-8, 13/50297-0, 12/03750-8)
GU, FANG; CHIESSI, CRISTIANO M.; ZONNEVELD, KARIN A. F.; BEHLING, HERMANN. Shifts of the Brazil-Falklands/Malvinas Confluence in the western South Atlantic during the latest Pleistocene-Holocene inferred from dinoflagellate cysts. PALYNOLOGY, v. 43, n. 3, p. 483-493, . (12/17517-3, 13/50297-0)
MASCARENHAS, RILQUER; MIYAKI, CRISTINA YUMI; DOBROVOLSKI, RICARDO; BATALHA-FILHO, HENRIQUE. Late Pleistocene climate change shapes population divergence of an Atlantic Forest passerine: a model-based phylogeographic hypothesis test. JOURNAL OF ORNITHOLOGY, v. 160, n. 3, p. 733-748, . (09/12989-1, 13/50297-0)
MELO, D. H. A.; FILGUEIRAS, B. K. C.; ISERHARD, C. A.; IANNUZZI, L.; FREITAS, A. V. L.; LEAL, I. R.. Effect of habitat loss and fragmentation on fruit-feeding butterflies in the Brazilian Atlantic Forest. CANADIAN JOURNAL OF ZOOLOGY, v. 97, n. 7, p. 588-596, . (11/50225-3, 13/50297-0)
NOGUEIRA, A. A.; BRAGAGNOLO, C.; DASILVA, M. B.; MARTINS, T. K.; LORENZO, E. P.; PERBICHE-NEVES, G.; PINTO-DA-ROCHA, R.. Historical signatures in the alpha and beta diversity patterns of Atlantic Forest harvestman communities (Arachnida: Opiliones). CANADIAN JOURNAL OF ZOOLOGY, v. 97, n. 7, p. 631-643, . (13/50297-0)
GU, FANG; CHIESSI, CRISTIANO M.; ZONNEVELD, KARIN A. F.; BEHLING, HERMANN. Late Quaternary environmental dynamics inferred from marine sediment core GeoB6211-2 off southern Brazil. PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY, v. 496, p. 48-61, . (12/17517-3, 13/50297-0)
CAMACHO, AGUSTIN; RUSCH, TRAVIS; RAY, GRAHAM; TELEMECO, RORY S.; RODRIGUES, MIGUEL TREFAUT; ANGILLETTA, MICHAEL J.. Measuring behavioral thermal tolerance to address hot topics in ecology, evolution, and conservation. Journal of Thermal Biology, v. 73, p. 71-79, . (12/15754-8, 13/50297-0, 15/01300-3)
MASTRETTA-YANES, ALICIA; XUE, ALEXANDER T.; MORENO-LETELIER, ALEJANDRA; JORGENSEN, TOVE H.; ALVAREZ, NADIR; PINERO, DANIEL; EMERSON, BRENT C.. Long-term insitu persistence of biodiversity in tropical sky islands revealed by landscape genomics. Molecular Ecology, v. 27, n. 2, p. 432-448, . (13/50297-0)
LOURENCO, GISELLE M.; SOARES, GLORIA R.; SANTOS, TALITA P.; DATTILO, WESLEY; FREITAS, ANDRE V. L.; RIBEIRO, SERVIO P.. Equal but different: Natural ecotones are dissimilar to anthropic edges. PLoS One, v. 14, n. 3, . (11/50225-3, 13/50297-0)
CHAZOT, NICOLAS; DE-SILVA, DONNA LISA; WILLMOTT, KEITH R.; FREITAS, ANDRE V. L.; LAMAS, GERARDO; MALLET, JAMES; GIRALDO, CARLOS E.; URIBE, SANDRA; ELIAS, MARIANNE. Contrasting patterns of Andean diversification among three diverse clades of Neotropical clearwing butterflies. ECOLOGY AND EVOLUTION, v. 8, n. 8, p. 3965-3982, . (11/50225-3, 13/50297-0, 12/50260-6)
TOURINHO, ANA LUCIA; DIAS, SIDCLAY C.; LO-MAN-HUNG, NANCY F.; PINTO-DA-ROCHA, RICARDO; BONALDO, ALEXANDRE B.; BACCARO, FABRICIO B.. Optimizing survey methods for spiders and harvestmen assemblages in an Amazonian upland forest. PEDOBIOLOGIA, v. 67, p. 35-44, . (13/50297-0)
SIMON, QUENTIN; LEDRU, MARIE-PIERRE; SAWAKUCHI, ANDRE OLIVEIRA; FAVIER, CHARLY; MINELI, THAYS D.; GROHMANN, CARLOS H.; GUEDES, MARCO; BARE, EDOUARD; THOUVENY, NICOLAS; GARCIA, MARTA; et al. Chronostratigraphy of a 1.5 +/- 0.1 Ma composite sedimentary record from Colonia basin (SE Brazil): Bayesian modeling based on paleomagnetic, authigenic Be-10/Be-9, radiocarbon and luminescence dating. QUATERNARY GEOCHRONOLOGY, v. 58, . (13/50297-0)
THOME, MARIA TEREZA C.; LYRA, MARIANA L.; LEMES, PRISCILA; TEIXEIRA, LARYSSA S.; CARNAVAL, ANA CAROLINA; HADDAD, CELIO F. B.; CANEDO, CLARISSA. Outstanding diversity and microendemism in a clade of rare Atlantic Forest montane frogs. Molecular Phylogenetics and Evolution, v. 149, . (13/50297-0)
BOUIMETARHAN, ILHAM; CHIESSI, CRISTIANO M.; GONZALEZ-ARANGO, CATALINA; DUPONT, LYDIE; VOIGT, INES; PRANGE, MATTHIAS; ZONNEVELD, KARIN. Intermittent development of forest corridors in northeastern Brazil during the last deglaciation: Climatic and ecologic evidence. QUATERNARY SCIENCE REVIEWS, v. 192, p. 86-96, . (13/50297-0)
BEERAVOLU, CHAMPAK R.; HICKERSON, MICHAEL J.; FRANTZ, LAURENT A. F.; LOHSE, KONRAD. ABLE: blockwise site frequency spectra for inferring complex population histories and recombination. Genome Biology, v. 19, . (13/50297-0)
TRUJILLO-ARIAS, NATALIA; CALDERON, LUCIANO; SANTOS, FABRICIO R.; MIYAKI, CRISTINA Y.; ALEIXO, ALEXANDRE; WITT, CHRISTOPHER C.; TUBARO, PABLO L.; CABANNE, GUSTAVO S.. Forest corridors between the central Andes and the southern Atlantic Forest enabled dispersal and peripatric diversification without niche divergence in a passerine. Molecular Phylogenetics and Evolution, v. 128, p. 221-232, . (13/50297-0)
STRANGAS, MARIA L.; NAVAS, CARLOS A.; RODRIGUES, MIGUEL T.; CARNAVAL, ANA C.. Thermophysiology, microclimates, and species distributions of lizards in the mountains of the Brazilian Atlantic Forest. ECOGRAPHY, v. 42, n. 2, SI, p. 354-364, . (13/50297-0, 08/57687-0, 03/10335-8, 11/50146-6)
CABANNE, GUSTAVO S.; CAMPAGNA, LEONARDO; TRUJILLO-ARIAS, NATALIA; NAOKI, KAZUYA; GOMEZ, ISABEL; MIYAKI, CRISTINA Y.; SANTOS, FABRICIO R.; DANTAS, GISELLE P. M.; ALEIXO, ALEXANDRE; CLARAMUNT, SANTIAGO; et al. Phylogeographic variation within the Buff-browed Foliage-gleaner (Aves: Furnariidae: Syndactyla rufosuperciliata) supports an Andean-Atlantic forests connection via the Cerrado. Molecular Phylogenetics and Evolution, v. 133, p. 198-213, . (13/50297-0)
PORTO, TIAGO JORDAO; PINTO-DA-ROCHA, RICARDO; BERNARDO DA ROCHA, PEDRO LUIS. Regional distribution patterns can predict the local habitat specialization of arachnids in heterogeneous landscapes of the Atlantic Forest. DIVERSITY AND DISTRIBUTIONS, v. 24, n. 3, p. 375-386, . (13/50297-0, 12/02969-6)
SCHULTZ, EDUARDO D.; PEREZ-EMAN, JORGE; ALEIXO, ALEXANDRE; MIYAKI, CRISTINA Y.; BRUMFIELD, ROBB T.; CRACRAFT, JOEL; RIBAS, CAMILA C.. Diversification history in the Dendrocincla fuliginosa complex (Aves: Dendrocolaptidae): Insights from broad geographic sampling. Molecular Phylogenetics and Evolution, v. 140, . (09/12989-1, 13/50297-0)
ZENKER, MAURICIO M.; WAHLBERG, NIKLAS; BREHM, GUNNAR; TESTON, JOSE A.; PRZYBYLOWICZ, LUKASZ; PIE, MARCIO R.; FREITAS, ANDRE V. L.. Systematics and origin of moths in the subfamily Arctiinae (Lepidoptera, Erebidae) in the Neotropical region. ZOOLOGICA SCRIPTA, v. 46, n. 3, p. 348-362, . (11/50225-3, 12/50260-6, 14/06646-2, 13/50297-0, 13/09647-7)
ANDRÉ VICTOR LUCCI FREITAS; EDUARDO PROENÇA BARBOSA; KEITH RICHARD WILLMOTT; NIKLAS WAHLBERG; GERARDO LAMAS. 'Species' from two different butterfly genera combined into one: description of a new genus of Euptychiina (Nymphalidae: Satyrinae) with unusually variable wing pattern. Revista Brasileira de Entomologia, v. 60, n. 2, p. 157-165, . (11/50225-3, 12/03750-8, 12/50260-6, 13/50297-0)
DAMRON, BRITTANY N.; PINTO-DA-ROCHA, RICARDO; LONGHORN, STUART J.. Description of a new species of Eucynorta (Opiliones, Cosmetidae) from Cortes, Honduras. Zootaxa, v. 4450, n. 1, p. 125-134, . (13/50297-0, 12/02969-6)
MARIN, MARIO A.; PENA, CARLOS; URIBE, SANDRA I.; FREITAS, ANDRE V. L.. Morphology agrees with molecular data: phylogenetic affinities of Euptychiina butterflies (Nymphalidae: Satyrinae). Systematic Entomology, v. 42, n. 4, p. 768-785, . (14/16481-0, 13/50297-0, 12/50260-6, 11/50225-3)
FONSECA, LUIZ HENRIQUE M.; LOHMANN, LUCIA G.. Adenocalymma cauliflorum (Bignonieae, Bignoniaceae), a New Cauliflorous Species from the Atlantic Forest of Eastern Brazil. SYSTEMATIC BOTANY, v. 42, n. 3, p. 584-589, . (11/50859-2, 13/50297-0, 12/50260-6)
PINTO-DA-ROCHA, RICARDO; BRAGAGNOLO, CIBELE; TOURINHO, ANA LUCIA. Three new species of Thrasychiroides Soares & Soares, 1947 from Brazilian Mountains (Opiliones, Eupnoi, Neopilionidae). Zootaxa, v. 3869, n. 4, p. 469-482, . (13/50297-0, 09/17206-5, 12/02969-6)
BATALHA-FILHO, HENRIQUE; PESSOA, RODRIGO O.; FABRE, PIERRE-HENRI; FJELDSA, JON; IRESTEDT, MARTIN; ERICSON, PER G. P.; SILVEIRA, LUIS F.; MIYAKI, CRISTINA Y.. Phylogeny and historical biogeography of gnateaters (Passeriformes, Conopophagidae) in the South America forests. Molecular Phylogenetics and Evolution, v. 79, p. 422-432, . (13/50297-0, 09/12989-1)
PAZ, A.; SPANOS, Z.; BROWN, J. L.; LYRA, M.; HADDAD, C.; RODRIGUES, M.; CARNAVAL, A.. Phylogeography of Atlantic Forest glassfrogs (Vitreorana): when geography, climate dynamics and rivers matter. HEREDITY, v. 122, n. 5, p. 545-557, . (13/50741-7, 14/50342-8, 11/50146-6, 13/50297-0, 03/10335-8)
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RAMOS, RENATO ROGNER; FRANCINI, RONALDO BASTOS; HABIB, MOHAMED EZZ EL-DIN MOSTAFA; FREITAS, ANDRE VICTOR LUCCI. Seasonal Patterns of Host Plant Use in an Assemblage of Heliconiini Butterflies (Lepidoptera: Nymphalidae) in a Neotropical forest. Neotropical Entomology, v. 50, n. 3, . (13/50297-0, 11/50225-3, 12/50260-6)
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MORAES, SIMEAO DE SOUZA; MURILLO-RAMOS, LEIDYS; MACHADO, PATRICIA A.; GHANAVI, HAMID R.; MAGALDI, LUIZA M.; SILVA-BRANDAO, KARINA L.; KATO, MASSUO J.; FREITAS, ANDRE V. L.; WAHLBERG, NIKLAS. A double-edged sword: Unrecognized cryptic diversity and taxonomic impediment in Eois (Lepidoptera, Geometridae). ZOOLOGICA SCRIPTA, . (15/24663-4, 15/17047-5, 13/50297-0, 11/50225-3, 16/20196-5, 12/50260-6)
MARQUARDT, GISELE C.; BICUDO, DENISE C.; DE BICUDO, CARLOS E. M.; LEDRU, MARIE-PIERRE; ECTOR, LUC; WETZEL, CARLOS E.. Planothidium scrobiculatum sp. nov. (Bacillariophyta), a new monoraphid diatom from freshwater Pleistocene deposits of South America. Fottea, v. 21, n. 1, p. 53-61, . (17/50341-0, 13/50297-0)
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CASSINO, RAQUEL FRANCO; LEDRU, MARIE-PIERRE; SANTOS, RUDNEY DE ALMEIDA; FAVIER, CHARLY. Vegetation and fire variability in the central Cerrados (Brazil) during the Pleistocene-Holocene transition was influenced by oscillations in the SASM boundary belt. QUATERNARY SCIENCE REVIEWS, v. 232, . (13/50297-0)
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FREITAS, A. V. L.; MUNIZ, D. G.; CARREIRA, J. Y. O.; OLIVEIRA, P. S.. FRUIT-FEEDING BUTTERFLY ASSEMBLAGES IN A NEOTROPICAL SAVANNA: ASSESSING PHENOLOGICAL PATTERNS USING BAITED TRAPS. JOURNAL OF THE LEPIDOPTERISTS' SOCIETY, v. 75, n. 2, p. 88-103, . (12/50260-6, 09/02451-4, 14/50316-7, 14/23141-1, 17/16645-1, 11/50225-3, 13/50297-0, 11/18580-8)
FREITAS, A. V. L.; ROSA, A. H. B.; NOBRE, C. E. B.; MELO, D. H. A.; MOTA, L. L.; SILVA-BRANDAO, K. L.; MACHADO, P. A.; CARREIRA, J. Y. O.. Immature Stages, Natural History, Systematics and Conservation of an Endangered Neotropical Butterfly: the Case of Scada karschina delicata (Nymphalidae: Ithomiini). Neotropical Entomology, v. 49, n. 5, p. 685-695, . (11/50225-3, 13/50297-0)
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MORAES, SIMEAO DE SOUZA; MURILLO-RAMOS, LEIDYS; MACHADO, PATRICIA A.; GHANAVI, HAMID R.; MAGALDI, LUIZA M.; SILVA-BRANDAO, KARINA L.; KATO, MASSUO J.; FREITAS, ANDRE V. L.; WAHLBERG, NIKLAS. A double-edged sword: Unrecognized cryptic diversity and taxonomic impediment in Eois (Lepidoptera, Geometridae). ZOOLOGICA SCRIPTA, v. 50, n. 5, p. 633-646, . (15/24663-4, 12/50260-6, 13/50297-0, 15/17047-5, 16/20196-5, 11/50225-3)
SILVA-BRANDAO, KARINA L.; CIRINO, MARIANA; MAGALDI, LUIZA DE MORAES; GUERATTO, PATRICIA EYNG; MATTOS, RICARDO GABRIEL; FREITAS, ANDRE V. L.. ubspecies limits and hidden Wolbachia diversity in Actinote pellenea butterflie. SYSTEMATICS AND BIODIVERSITY, v. 19, n. 8, . (12/16266-7, 13/50297-0, 11/50225-3, 15/24663-4, 18/19171-3, 12/50260-6)
DAL VECHIO, FRANCISCO; PRATES, IVAN; GRAZZIOTIN, FELIPE G.; GRABOSKI, ROBERTA; RODRIGUES, MIGUEL TREFAUT. Molecular and phenotypic data reveal a new Amazonian species of pit vipers (Serpentes: Viperidae: Bothrops). Journal of Natural History, v. 54, n. 37-38, p. 2415-2437, . (11/50146-6, 03/10335-8, 13/50297-0)
RIVERA, DANIELLE; PRATES, IVAN; FIRNENO, JR., THOMAS J.; RODRIGUES, MIGUEL TREFAUT; CALDWELL, JANALEE P.; FUJITA, MATTHEW K.. hylogenomics, introgression, and demographic history of South American true toads (Rhinella. Molecular Ecology, v. 31, n. 3, . (13/50297-0, 12/15754-8, 03/10335-8, 17/08357-6, 11/50206-9, 11/50146-6)
MATOS-MARAVI, PAVEL; WAHLBERG, NIKLAS; FREITAS, ANDRE V. L.; DEVRIES, PHIL; ANTONELLI, ALEXANDRE; PENZ, CARLA M.. Mesoamerica is a cradle and the Atlantic Forest is a museum of Neotropical butterfly diversity: insights from the evolution and biogeography of Brassolini (Lepidoptera: Nymphalidae). Biological Journal of the Linnean Society, v. 133, n. 3, p. 704-724, . (13/50297-0, 12/50260-6, 11/50225-3)
FOUQUET, ANTOINE; LEBLANC, KILLIAN; FRAMIT, MARLENE; REJAUD, ALEXANDRE; RODRIGUES, MIGUEL T.; CASTROVIEJO-FISHER, SANTIAGO; PELOSO, V, PEDRO L.; PRATES, IVAN; MANZI, SOPHIE; SUESCUN, UXUE; et al. Species diversity and biogeography of an ancient frog clade from the Guiana Shield (Anura: Microhylidae: Adelastes, Otophryne, Synapturanus) exhibiting spectacular phenotypic diversification. Biological Journal of the Linnean Society, v. 132, n. 2, p. 233-256, . (13/50297-0, 03/10335-8, 11/50146-6, 12/15754-8)
MELO-SAMPAIO, PAULO R.; PRATES, IVAN; PELOSO, PEDRO L. V.; RECODER, RENATO; DAL VECHIO, FRANCISCO; MARQUES-SOUZA, SERGIO; RODRIGUES, MIGUEL T.. A new nurse frog from Southwestern Amazonian highlands, with notes on the phylogenetic affinities of Allobates alessandroi (Aromobatidae). Journal of Natural History, v. 54, n. 1-4, SI, . (13/50297-0, 11/50146-6)
THOM, GREGORY; XUE, ALEXANDER T.; SAWAKUCHI, ANDRE O.; RIBAS, CAMILA C.; HICKERSON, MICHAEL J.; ALEIXO, ALEXANDRE; MIYAKI, CRISTINA. Quaternary climate changes as speciation drivers in the Amazon floodplains. SCIENCE ADVANCES, v. 6, n. 11, . (13/50297-0, 17/25720-7, 14/00113-2, 18/17869-3, 12/50260-6, 15/12551-7)
PRATES, IVAN; PAZ, ANDREA; BROWN, JASON L.; CARNAVAL, ANA C.. Links between prey assemblages and poison frog toxins: A landscape ecology approach to assess how biotic interactions affect species phenotypes. ECOLOGY AND EVOLUTION, v. 9, n. 24, . (13/50297-0)
FREITAS, A. V. L.; FRANCINI, R. B.; MIELKE, O. H. H.; ROSA, A. H. B.; MAGALDI, L. M.; SILVA-BRANDAO, K. L.. A New and RareActinoteHubner (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini) from Southeastern Brazil. Neotropical Entomology, . (13/50297-0, 11/50225-3, 15/24663-4)
SANTOS, MARCUS THADEU T.; DE MAGALHAES, RAFAEL F.; LYRA, MARIANA L.; SANTOS, FABRICIO R.; ZAHER, HUSSAM; GIASSON, LUIS O. M.; GARCIA, PAULO C. A.; CARNAVAL, ANA CAROLINA; HADDAD, CELIO F. B.. Multilocus phylogeny of Paratelmatobiinae (Anura: Leptodactylidae) reveals strong spatial structure and previously unknown diversity in the Atlantic Forest hotspot. Molecular Phylogenetics and Evolution, v. 148, . (17/26162-8, 13/50741-7, 11/50206-9, 14/50342-8, 13/50297-0)
SOTELO-MUNOZ, MANUELITA; MALDONADO-COELHO, MARCOS; SVENSSON-COELHO, MARIA; SANTOS, SIDNEI S. DOS; MIYAKI, CRISTINA Y.. Vicariance, dispersal, extinction and hybridization underlie the evolutionary history of Atlantic forest fire-eye antbirds (Aves: Thamnophilidae). Molecular Phylogenetics and Evolution, v. 148, . (13/50297-0, 16/11439-1, 12/08576-6, 15/18287-0)
THOM, GREGORY; SMITH, BRIAN TILSTON; GEHARA, MARCELO; MONTESANTI, JULIA; LIMA-RIBEIRO, MATHEUS S.; PIACENTINI, VITOR Q.; MIYAKI, CRISTINA Y.; DO AMARAL, FABIO RAPOSO. Climatic dynamics and topography control genetic variation in Atlantic Forest montane birds. Molecular Phylogenetics and Evolution, v. 148, . (11/50143-7, 13/50297-0, 11/23155-4, 17/25720-7, 18/17869-3, 18/03428-5)
REJAUD, ALEXANDRE; RODRIGUES, MIGUEL T.; CRAWFORD, ANDREW J.; CASTROVIEJO-FISHER, SANTIAGO; JARAMILLO, ANDRES F.; CHAPARRO, JUAN C.; GLAW, FRANK; GAGLIARDI-URRUTIA, GIUSSEPE; MORAVEC, JIRI; DE LA RIVA, IGNACIO J.; et al. Historical biogeography identifies a possible role of Miocene wetlands in the diversification of the Amazonian rocket frogs (Aromobatidae:Allobates). Journal of Biogeography, v. 47, n. 11, . (13/50297-0, 11/50146-6)
THOM, GREGORY; GEHARA, MARCELO; SMITH, BRIAN TILSTON; MIYAKI, CRISTINA Y.; DO AMARAL, FABIO RAPOSO. Microevolutionary dynamics show tropical valleys are deeper for montane birds of the Atlantic Forest. NATURE COMMUNICATIONS, v. 12, n. 1, . (11/50143-7, 17/25720-7, 18/03428-5, 13/50297-0, 11/23155-4, 18/17869-3)
PRATES, IVAN; D'ANGIOLELLA, ANNELISE B.; RODRIGUES, MIGUEL T.; MELO-SAMPAIO, PAULO R.; DE QUEIROZ, KEVIN; BELL, RAYNA C.. Evolutionary drivers of sexual signal variation in Amazon Slender Anoles. Evolution, v. 75, n. 6, p. 1361-1376, . (11/50146-6, 03/10335-8, 13/50297-0)
PRATES, IVAN; MELO-SAMPAIO, PAULO ROBERTO; DE QUEIROZ, KEVIN; CARNAVAL, ANA CAROLINA; RODRIGUES, MIGUEL TREFAUT; DRUMMOND, LEANDRO DE OLIVEIRA. Discovery of a new species of Anolis lizards from Brazil and its implications for the historical biogeography of montane Atlantic Forest endemics. Amphibia-Reptilia, v. 41, n. 1, p. 87-103, . (13/50297-0, 11/50146-6)

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