Dimensions US-BIOTA São Paulo: a multidisciplinary framework for biodiversity prediction in the Brazilian Atlantic forest hotspot

• Grant number: 13/50297-0
• Support Opportunities: BIOTA-FAPESP Program - Thematic Grants
• Start date: September 01, 2013
• End date: February 28, 2023
• Field of knowledge: Biological Sciences - Biology
• Agreement: NSF - Dimensions of Biodiversity and BIOTA
• Principal Investigator: Cristina Yumi Miyaki
• Grantee: Cristina Yumi Miyaki
• Principal researcher abroad: Ana Carolina O. Queiroz Carnaval
• Institution abroad: City University of New York, New York (CUNY), United States
• Host Institution: Instituto de Biociências (IB). Universidade de São Paulo (USP). São Paulo , SP, Brazil
• Pesquisadores principais: Francisco William da Cruz Junior ; Ricardo Pinto da Rocha
• Associated scholarship(s): 17/25720-7 - Comparative phylogeography of montane bird species from southern Atlantic Forest: Integrating evolutionary and ecological traits in the study of community assemblage, BP.PD; 17/01211-6 - Population genomics and historical demography of Atlantic Forest birds: a hypothesis test of regugia and the role of altitudinal distribution in phylogeography, BP.MS; 15/25325-5 - Evolution of the arachnids of the order Opiliones from Brazilian Atlantic rain forest: a survey from population to high taxonomical level (Arachnida, Opiliones, Gonyleptidae), BE.PQ; + associated scholarships 15/14327-7 - Paleoclimate and calibration study of karst system in central Brazil: implication for paleoclimate studies based on speleothem records, BP.PD; 14/10914-2 - Fauna exchange between the Amazonian and Atlantic Forests: phylogeny and biogeography of the genera Xipholena and Cotinga (Passeriformes: Cotingidae) based on thousands of loci, BP.PD; 13/24645-0 - Hybrid zone and comparative historical demography of three species of birds in a contact zone in the Atlantic Forest, BP.DR; 13/23736-2 - Alpha, beta, functional and phylogenetic diversity of opilions in the Atlantic Forest: patterns and relationships with ecological and historical factors, BP.PD; 12/08576-6 - Malaria parasites of a widespread suboscine antbird in South America: assessing the influence of geographic distance and host phylogeography on the prevalence, diversity, and community organization of parasites within and across biogeographic regions, BP.PD - associated scholarships

Scientific publications

(252)

(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)

ANDRÉ VICTOR LUCCI FREITAS; EDUARDO PROENÇA BARBOSA; KEITH RICHARD WILLMOTT; NIKLAS WAHLBERG; GERARDO LAMAS. `Species' from two different butterfly genera combined into one: description of a new genus of Euptychiina (Nymphalidae: Satyrinae) with unusually variable wing pattern. Revista Brasileira de Entomologia, v. 60, n. 2, p. 157-165, Jun. 2016. (13/50297-0, 11/50225-3, 12/50260-6, 12/03750-8)

KOK, PHILIPPE J. R.; BITTENBINDER, MATYAS A.; VAN DEN BERG, JORIS K.; MARQUES-SOUZA, SERGIO; SALES NUNES, PEDRO M.; LAKING, ALEXANDRA E.; TEIXEIRA, JR., MAURO; FOUQUET, ANTOINE; MEANS, D. BRUCE; MACCULLOCH, ROSS D.; et al. Integrative taxonomy of the gymnophthalmid lizard Neusticurus rudis Boulenger, 1900 identifies a new species in the eastern Pantepui region, north-eastern South America. Journal of Natural History, v. 52, n. 13-16, SI, p. 1029-1066, 2018. (11/50146-6, 12/10163-1, 13/50297-0)

PINTO-DA-ROCHA, RICARDO; DA FONSECA-FERREIRA, RAFAEL; BICHUETTE, MARIA ELINA. A new highly specialized cave harvestman from Brazil and the first blind species of the genus: landumoema smeagol sp n. (Arachnida, Opiliones, Gonyleptidae). ZOOKEYS, n. 537, p. 79-95, 2015. (13/50297-0, 12/02969-6)

CAMACHO, AGUSTIN; RUSCH, TRAVIS W.. Methods and pitfalls of measuring thermal preference and tolerance in lizards. Journal of Thermal Biology, v. 68, n. A, p. 63-72, AUG 2017. (13/50297-0, 15/01300-3, 12/15754-8)

TEIXEIRA, JR., MAURO; PRATES, IVAN; NISA, CAROLINA; CAMARAO SILVA-MARTINS, NATHALIA SUZAN; STRUESSMANN, CHRISTINE; RODRIGUES, MIGUEL TREFAUT. Molecular data reveal spatial and temporal patterns of diversification and a cryptic new species of lowland Stenocercus Dumeril & Bibron, 1837 (Squamata: Tropiduridae). Molecular Phylogenetics and Evolution, v. 94, n. A, p. 410-423, JAN 2016. (13/50297-0, 03/10335-8, 11/50146-6)

BRAGAGNOLO, CIBELE; HARA, MARCOS R.; PINTO-DA-ROCHA, RICARDO. A new family of Gonyleptoidea from South America (Opiliones, Laniatores). Zoological Journal of the Linnean Society, v. 173, n. 2, p. 296-319, FEB 2015. (13/50297-0, 09/17206-5, 12/02969-6, 08/06604-7)

PINTO-DA-ROCHA, RICARDO; ANDRADE, RENATA; MORENO-GONZALEZ, JAIRO A.. Two new cave-dwelling genera of short-tailed whip-scorpions from Brazil (Arachnida: Schizomida: Hubbardiidae). Zoologia, v. 33, n. 2, 2016. (13/50297-0)

DOS SANTOS, JESSIE PEREIRA; ISERHARD, CRISTIANO AGRA; OLIVEIRA CARREIRA, JUNIA YASMIN; LUCCI FREITAS, ANDRE VICTOR. Monitoring fruit-feeding butterfly assemblages in two vertical strata in seasonal Atlantic Forest: temporal species turnover is lower in the canopy. JOURNAL OF TROPICAL ECOLOGY, v. 33, n. 5, p. 345-355, SEP 2017. (11/08433-8, 13/50297-0, 11/50225-3)

LUCCI FREITAS, ANDRE VICTOR; FRANCINI, RONALDO BASTOS; PALUCH, MARLON; BARBOSA, EDUARDO PROENCA. A new species of Actinote Hubner (Nymphalidae: Heliconiinae: Acraeini) from southeast Brazil. Revista Brasileira de Entomologia, v. 62, n. 2, p. 135-147, APR-JUN 2018. (12/03750-8, 11/50225-3, 13/50297-0, 16/15873-8)

FONSECA, EMANUEL M.; GEHARA, MARCELO; WERNECK, FERNANDA P.; LANNA, FLAVIA M.; COLLI, GUARINO R.; SITES, JR., JACK W.; RODRIGUES, MIGUEL T.; GARDA, ADRIAN A.. Diversification with gene flow and niche divergence in a lizard species along the South American ``diagonal of open formations{''}. Journal of Biogeography, v. 45, n. 7, p. 1688-1700, JUL 2018. (13/50297-0, 03/10335-8, 11/50146-6)

NAKAHARA, SHINICHI; MATOS-MARAVI, PAVEL; BARBOSA, EDUARDO P.; WILLMOTT, KEITH R.; LAMAS, GERARDO; FREITAS, ANDRE V. L.. Two New Species of Taygetina With a Possible Case of `Juxta Loss' in Butterflies (Lepidoptera: Nymphalidae: Satyrinae). INSECT SYSTEMATICS AND DIVERSITY, v. 3, n. 6, NOV 2019. (11/50225-3, 12/50260-6, 13/50297-0, 16/15873-8)

FREITAS, A. V. L.; ROSA, A. H. B.; NOBRE, C. E. B.; MELO, D. H. A.; MOTA, L. L.; SILVA-BRANDAO, K. L.; MACHADO, P. A.; CARREIRA, J. Y. O.. Immature Stages, Natural History, Systematics and Conservation of an Endangered Neotropical Butterfly: the Case ofScada karschina delicata(Nymphalidae: Ithomiini). Neotropical Entomology, JUL 2020. (13/50297-0, 11/50225-3)

BIANCALANA, RENATA NEVES; BIONDO, CIBELE; DO AMARAL, FABIO RAPOSO. The mitochondrial genome of the sooty swift (Cypseloides fumigatus). MITOCHONDRIAL DNA PART B-RESOURCES, v. 2, p. 198-200, 2017. (11/50143-7, 13/50297-0, 11/23155-4)

RECODER, RENATO SOUSA; DAL VECHIO, FRANCISCO; MARQUES-SOUZA, SERGIO; TEIXEIRA, JR., MAURO; SILVA-DA-SILVA, MAIUME; SANTOS, JR., ALFREDO P.; RIBEIRO, SIRIA; BARRIO-AMOROS, CESAR; RODRIGUES, MIGUEL TREFAUT. Geographic variation and taxonomy of red-tailed Gymnophthalmus (Squamata: Gymnophthalmidae) from Amazonian Savannas. Zootaxa, v. 4497, n. 1, p. 61-81, OCT 8 2018. (13/50297-0, 03/10335-8, 12/09463-0, 17/08357-6)

PERES, ELEN ARROYO; BENEDETTI, ALIPIO REZENDE; HIRUMA, SILVIO TAKASHI; SOBRAL-SOUZA, THADEU; PINTO-DA-ROCHA, RICARDO. Phylogeography of Sodreaninae harvestmen (Arachnida: Opiliones: Gonyleptidae): Insights into the biogeography of the southern Brazilian Atlantic Forest. Molecular Phylogenetics and Evolution, v. 138, p. 1-16, SEP 2019. (13/50297-0)

NOGUEIRA, ANDRE DO AMARAL; BRAGAGNOLO, CIBELE; DASILVA, MARCIO BERNARDINO; CARVALHO, LEONARDO SOUSA; BENEDETTI, ALIPIO REZENDE; PINTO-DA-ROCHA, RICARDO. Spatial variation in phylogenetic diversity of communities of Atlantic Forest harvestmen (Opiliones, Arachnida). Insect Conservation and Diversity, v. 12, n. 5, p. 414-426, SEP 2019. (13/23736-2, 13/50297-0)

ANDRÉ V.L. FREITAS; LUÍSA L. MOTA; THAMARA ZACCA; EDUARDO P. BARBOSA. Description of a new and highly distinctive genus and species of Euptychiina (Lepidoptera: Nymphalidae: Satyrinae) from the Brazilian southern Amazon. Revista Brasileira de Entomologia, v. 63, n. 3, p. 254-261, 2019-09-05. (16/15873-8, 11/50225-3, 17/02264-6, 13/50297-0)

PINZON MORALES, CONCHITA A.; PINTO-DA-ROCHA, RICARDO. Two new Colombian harvestmen of the genus Quindina Roewer, 1914 (Opiliones: Nomoclastidae). Zootaxa, v. 4748, n. 3, p. 531-547, MAR 9 2020. (13/50297-0)

BENAVIDES, LIGIA R.; PINTO-DA-ROCHA, RICARDO; GIRIBET, GONZALO. The Phylogeny and Evolution of the Flashiest of the Armored Harvestmen (Arachnida: Opiliones). Systematic Biology, v. 70, n. 4, p. 648-659, JUL 2021. (13/50297-0)

BRUNES, TULIANA O.; LYRA, MARIANA L.; MALDONADO, JOSE A.; PELLEGRINO, KATIA C. M.; RODRIGUES, MIGUEL TREFAUT; FUJITA, MATTHEW K.. The first mitochondrial genome of a South America parthenogenetic lizard (Squamata: Gymnophthalmidae). MITOCHONDRIAL DNA PART B-RESOURCES, v. 6, n. 8, p. 2393-2395, AUG 3 2021. (16/03146-4, 13/50297-0, 11/50146-6, 18/07660-0)

NAKAHARA, S.; BARBOSA, E. P.; MARIN, M. A.; FREITAS, A. V. L.; POMERANTZ, T.; WILLMOTT, K. R.. Graphita gen. nov., a New Genus for Neonympha griphe C. Felder & R. Felder, 1867 (Lepidoptera, Nymphalidae, Satyrinae). Neotropical Entomology, v. 45, n. 6, p. 675-691, DEC 2016. (13/50297-0, 12/03750-8, 14/16481-0, 11/50225-3, 12/50260-6)

CABANNE, GUSTAVO S.; CALDERON, LUCIANO; TRUJILLO ARIAS, NATALIA; FLORES, PAMELA; PESSOA, RODRIGO; D'HORTA, FERNANDO M.; MIYAKI, CRISTINA Y.. Effects of Pleistocene climate changes on species ranges and evolutionary processes in the Neotropical Atlantic Forest. Biological Journal of the Linnean Society, v. 119, n. 4, p. 856-872, DEC 2016. (13/50297-0)

ZACCA, THAMARA; PALUCH, MARLON; SIEWERT, RICARDO; FREITAS, ANDRE; BARBOSA, EDUARDO; MIELKE, OLAF; CASAGRANDE, MIRNA. Revision of Godartiana Forster (Lepidoptera: Nymphalidae), with the description of a new species from northeastern Brazil. AUSTRAL ENTOMOLOGY, v. 56, n. 2, p. 169-190, MAY 2017. (12/03750-8, 13/50297-0, 11/50225-3)

NAKAHARA, S.; BARBOSA, E. P.; FREITAS, A. V. L.. A Potentially Endangered New Species of Euptychia Hubner, 1818 (Lepidoptera: Nymphalidae: Satyrinae) from the Atlantic Coastal Forest of Brazil. Neotropical Entomology, v. 46, n. 3, p. 302-309, JUN 2017. (12/03750-8, 13/50297-0, 11/50225-3)

DASILVA, MARCIO BERNARDINO; PINTO-DA-ROCHA, RICARDO; DESOUZA, ADRIANO MEDEIROS. A protocol for the delimitation of areas of endemism and the historical regionalization of the Brazilian Atlantic Rain Forest using harvestmen distribution data. CLADISTICS, v. 31, n. 6, p. 692-705, DEC 2015. (13/50297-0)

DE MEDEIROS, MARIA CLAUDIA M. P.; LOHMANN, LUCIA G.. Two new species of Tynanthus Miers (Bignonieae, Bignoniaceae) from Brazil. PHYTOKEYS, v. 42, p. 77-85, 2014. (13/50297-0, 10/51579-0, 11/50859-2, 12/50260-6)

ESPELAND, MARIANNE; BREINHOLT, JESSE W.; BARBOSA, EDUARDO P.; CASAGRANDE, MIRNA M.; HUERTAS, BLANCA; LAMAS, GERARDO; MARIN, MARIO A.; MIELKE, OLAF H. H.; MILLER, JACQUELINE Y.; NAKAHARA, SHINICHI; et al. Four hundred shades of brown: Higher level phylogeny of the problematic Euptychiina (Lepidoptera, Nymphalidae, Satyrinae) based on hybrid enrichment data. Molecular Phylogenetics and Evolution, v. 131, p. 116-124, FEB 2019. (13/50297-0, 16/15873-8, 14/16481-0, 11/50225-3, 12/50260-6)

CORONATO-RIBEIRO, AMANDA; PINTO-DA-ROCHA, RICARDO. Taxonomic revision and cladistic analysis of the genus Metalibitia Roewer, 1912 (Opiliones, Cosmetidae, Cosmetinae). Zootaxa, v. 4291, n. 2, p. 201-242, JUL 12 2017. (13/50297-0)

ISLER, MORTON L.; MALDONADO-COELHO, MARCOS. Calls distinguish species of Antbirds (Aves: Passeriformes: Thamnophilidae) in the genus Pyriglena. Zootaxa, v. 4291, n. 2, p. 275-294, JUL 12 2017. (13/50297-0, 15/18287-0)

PERES, ELEN ARROYO; DASILVA, MARCIO BERNARDINO; ANTUNES, JR., MANUEL; PINTO-DA-ROCHA, RICARDO. A short-range endemic species from south-eastern Atlantic Rain Forest shows deep signature of historical events: phylogeography of harvestmen Acutisoma longipes (Arachnida: Opiliones). SYSTEMATICS AND BIODIVERSITY, v. 16, n. 2, p. 171-187, 2018. (13/50297-0, 12/02969-6)

APAESTEGUI, JAMES; CRUZ, FRANCISCO WILLIAM; VUILLE, MATHIAS; FOHLMEISTER, JENS; CARLO ESPINOZA, JHAN; SIFEDDINE, ABDELFETTAH; STRIKIS, NICOLAS; GUYOT, JEAN LOUP; VENTURA, ROBERTO; CHENG, HAI; et al. Precipitation changes over the eastern Bolivian Andes inferred from speleothem (delta O-18) records for the last 1400 years. Earth and Planetary Science Letters, v. 494, p. 124-134, JUL 15 2018. (13/50297-0, 12/50260-6)

MACHADO, CAROLINA BARROS; GALETTI, JR., PEDRO MANOEL; CARNAVAL, ANA CAROLINA. Bayesian analyses detect a history of both vicariance and geodispersal in Neotropical freshwater fishes. Journal of Biogeography, v. 45, n. 6, p. 1313-1325, JUN 2018. (10/52315-7, 13/50297-0)

GROHMANN, CARLOS H.. Evaluation of TanDEM-X DEMs on selected Brazilian sites: Comparison with SRTM, ASTER GDEM and ALOS AW3D30. REMOTE SENSING OF ENVIRONMENT, v. 212, p. 121-133, JUN 2018. (16/06628-0, 13/50297-0, 12/50260-6)

NACER, DEBORAH F.; DO AMARAL, FABIO RAPOSO. Striking pseudogenization in avian phylogenetics: Numts are large and common in falcons. Molecular Phylogenetics and Evolution, v. 115, p. 1-6, OCT 2017. (11/50143-7, 13/50297-0, 11/23155-4)

GU, FANG; ZONNEVELD, KARIN A. F.; CHIESSI, CRISTIANO M.; ARZ, HELGE W.; PAETZOLD, JUERGEN; BEHLING, HERMANN. Long-term vegetation, climate and ocean dynamics inferred from a 73,500 years old marine sediment core (GeoB2107-3) off southern Brazil. QUATERNARY SCIENCE REVIEWS, v. 172, p. 55-71, SEP 15 2017. (12/17517-3, 13/50297-0)

DE VASCONCELOS SARAIVA, NICOLAS EUGENIO; DASILVA, MARCIO BERNARDINO. Event-based biogeography of Eusarcus dandara sp nov (Opiliones: Gonyleptidae), an endemic species of the Northern Atlantic Rainforest of Brazil, and its closely related species. Zootaxa, v. 4205, n. 6, p. 532-548, DEC 12 2016. (13/50297-0)

FRANCOSO, ELAINE; ZUNTINI, ALEXANDRE RIZZO; CARNAVAL, ANA CAROLINA; ARIAS, MARIA CRISTINA. Comparative phylogeography in the Atlantic forest and Brazilian savannas: pleistocene fluctuations and dispersal shape spatial patterns in two bumblebees. BMC Evolutionary Biology, v. 16, DEC 7 2016. (10/20548-2, 13/50297-0, 09/07124-1, 13/03961-1, 13/12530-4)

FREITAS, ANDRE V. L.; BARBOSA, EDUARDO PROENCA; MARIN, MARIO ALEJANDRO. IMMATURE STAGES AND NATURAL HISTORY OF THE NEOTROPICAL SATYRINE PAREUPTYCHIA OCIRRHOE INTERJECTA (NYMPHALIDAE: EUPTYCHIINA). JOURNAL OF THE LEPIDOPTERISTS' SOCIETY, v. 70, n. 4, p. 271-276, DEC 2 2016. (13/50297-0, 12/03750-8, 14/16481-0, 11/50225-3, 12/50260-6)

MONTADE, VINCENT; SAMPAIO DIOGO, IVAN JEFERSON; BREMOND, LAURENT; FAVIER, CHARLY; DA COSTA, ITAYGUARA RIBEIRO; LEDRU, MARIE-PIERRE; PARADIS, LAURE; PASSOS RODRIGUES MARTINS, EDUARDO SAVIO; BURTE, JULIEN; MAGALHAES E SILVA, FRANCISCO HILDER; et al. Pollen-based characterization of montane forest types in north-eastern Brazil. REVIEW OF PALAEOBOTANY AND PALYNOLOGY, v. 234, p. 147-158, NOV 2016. (13/50297-0)

WERNECK, FERNANDA P.; LEITE, RAFAEL N.; GEURGAS, SILVIA R.; RODRIGUES, MIGUEL T.. Biogeographic history and cryptic diversity of saxicolous Tropiduridae lizards endemic to the semiarid Caatinga. BMC Evolutionary Biology, v. 15, MAY 23 2015. (13/50297-0, 03/10335-8, 11/50146-6)

PRATES, IVAN; PENNA, ANNA; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Local adaptation in mainland anole lizards: Integrating population history and genome-environment associations. ECOLOGY AND EVOLUTION, v. 8, n. 23, p. 11932-11944, DEC 2018. (13/50297-0, 03/10335-8, 11/50146-6)

DIAS, FERNANDO M. S.; SIEWERT, RICARDO R.; FREITAS, ANDRE V. L.; LAMAS, GERARDO; MAGALDI, LUIZA M.; MIELKE, OLAF H. H.; CASAGRANDE, MIRNA M.. An integrative approach elucidates the systematics of Sea Hayward and Cybdelis Boisduval (Lepidoptera: Nymphalidae: Biblidinae). Systematic Entomology, v. 44, n. 1, p. 226-250, JAN 2019. (13/50297-0, 11/50225-3, 12/50260-6)

DO AMARAL, FABIO RAPOSO; NEVES, LEANDRO G.; RESENDE, JR., MARCIO F. R.; MOBILI, FLAVIA; MIYAKI, CRISTINA Y.; PELLEGRINO, KATIA C. M.; BIONDO, CIBELE. Ultraconserved Elements Sequencing as a Low-Cost Source of Complete Mitochondrial Genomes and Microsatellite Markers in Non-Model Amniotes. PLoS One, v. 10, n. 9, SEP 17 2015. (13/50297-0, 11/23155-4)

SVENSSON-COELHO, M.; SILVA, G. T.; SANTOS, S. S.; MIRANDA, L. S.; ARAUJO-SILVA, L. E.; RICKLEFS, R. E.; MIYAKI, C. Y.; MALDONADO-COELHO, M.. Lower Detection Probability of Avian Plasmodium in Blood Compared to Other Tissues. Journal of Parasitology, v. 102, n. 5, p. 559-561, OCT 2016. (12/08576-6, 13/50297-0)

BURBRINK, FRANK T.; CHAN, YVONNE L.; MYERS, EDWARD A.; RUANE, SARA; SMITH, BRIAN TILSTON; HICKERSON, MICHAEL J.. Asynchronous demographic responses to Pleistocene climate change in Eastern Nearctic vertebrates. ECOLOGY LETTERS, v. 19, n. 12, p. 1457-1467, DEC 2016. (13/50297-0)

MONTEIRO, YAGO FERRO; PINTO-DA-ROCHA, RICARDO. Revision of the genus Ferkeria Roewer, 1947, with the description of a new species (Opiliones: Laniatores: Cosmetidae). Zootaxa, v. 4006, n. 2, p. 361-373, AUG 24 2015. (13/50297-0)

BARBOSA, EDUARDO P.; SILVA, ANA K.; PALUCH, MARLON; AZEREDO-ESPIN, ANA MARIA L.; FREITAS, ANDRE V. L.. Uncovering the hidden diversity of the Neotropical butterfly genus Yphthimoides Forster (Nymphalidae: Satyrinae): description of three new species based on morphological and molecular data. ORGANISMS DIVERSITY & EVOLUTION, v. 15, n. 3, p. 577-589, SEP 2015. (12/03750-8, 13/50297-0, 11/50225-3)

DEMOS, TERRENCE C.; PETERHANS, JULIAN C. KERBIS; JOSEPH, TYLER A.; ROBINSON, JOHN D.; AGWANDA, BERNARD; HICKERSON, MICHAEL J.. Comparative Population Genomics of African Montane Forest Mammals Support Population Persistence across a Climatic Gradient and Quaternary Climatic Cycles. PLoS One, v. 10, n. 9, SEP 22 2015. (13/50297-0)

WALTARI, ERIC; SCHROEDER, RONNY; MCDONALD, KYLE; ANDERSON, ROBERT P.; CARNAVAL, ANA. Bioclimatic variables derived from remote sensing: assessment and application for species distribution modelling. METHODS IN ECOLOGY AND EVOLUTION, v. 5, n. 10, p. 1033-1042, OCT 2014. (13/50297-0, 12/50260-6)

ZUNTINI, ALEXANDRE R.; LOHMANN, LUCIA G.. Synopsis of Martinella Baill. (Bignonieae, Bignoniaceae), with the description of a new species from the Atlantic Forest of Brazil. PHYTOKEYS, v. 37, p. 15-24, 2014. (13/50297-0, 11/50859-2, 12/50260-6)

BRUNES, TULIANA O.; DA SILVA, ANDRE JUSTINO; MARQUES-SOUZA, SERGIO; RODRIGUES, MIGUEL T.; PELLEGRINO, KATIA C. M.. Not always young: The first vertebrate ancient origin of true parthenogenesis found in an Amazon leaf litter lizard with evidence of mitochondrial haplotypes surfing on the wave of a range expansion. Molecular Phylogenetics and Evolution, v. 135, p. 105-122, JUN 2019. (12/10163-1, 13/50297-0, 16/03146-4, 03/10335-8)

MACIEL, FERNANDA DE GOES; RUFO, DANILO AQUEU; KEUROGHLIAN, ALEXINE; RUSSO, ANNA CAROLINA; BRANDT, NATHALIA MORESCHI; VIEIRA, NATALY FERNANDES; DA NOBREGA, BRUNA MOURA; NAVA, ALESSANDRA; NARDI, MARCELLO SCHIAVO; DE ALMEIDA JACOMO, ANAH TEREZA; et al. Genetic diversity and population structure of white-lipped peccaries (Tayassu pecari) in the Pantanal, Cerrado and Atlantic Forest from Brazil. Mammalian Biology, v. 95, p. 85-92, MAR 2019. (09/12989-1, 13/50297-0, 15/20133-0)

ZACCA, THAMARA; CASAGRANDE, MIRNA M.; MIELKE, OLAF. H. H.; HUERTAS, BLANCA; BARBOSA, EDUARDO P.; FREITAS, ANDRE V. L.; MAGALDI, LUIZA M.; ESPELAND, MARIANNE; NAKAHARA, SHINICHI; WILLMOTT, KEITH R.. Systematics of the butterfly genus Cissia Doubleday, 1848 (Lepidoptera: Nymphalidae: Satyrinae) using an integrative approach. ARTHROPOD SYSTEMATICS & PHYLOGENY, v. 76, n. 2, p. 349-376, 2018. (11/50225-3, 13/50297-0, 17/02264-6, 12/50260-6, 16/15873-8)

THOM, GREGORY; DO AMARAL, FABIO RAPOSO; HICKERSON, MICHAEL J.; ALEIXO, ALEXANDRE; ARAUJO-SILVA, LUCAS E.; RIBAS, CAMILA C.; CHOUERI, ERIK; MIYAKI, CRISTINA Y.. Phenotypic and Genetic Structure Support Gene Flow Generating Gene Tree Discordances in an Amazonian Floodplain Endemic Species. Systematic Biology, v. 67, n. 4, p. 700-718, JUL 2018. (11/50143-7, 15/12551-7, 13/50297-0, 14/00113-2, 11/23155-4, 12/50260-6)

POTTER, SALLY; XUE, ALEXANDER T.; BRAGG, JASON G.; ROSAUER, DAN F.; ROYCROFT, EMILY J.; MORITZ, CRAIG. Pleistocene climatic changes drive diversification across a tropical savanna. Molecular Ecology, v. 27, n. 2, p. 520-532, JAN 2018. (13/50297-0)

PRATES, IVAN; MELO-SAMPAIO, PAULO ROBERTO; DRUMMOND, LEANDRO DE OLIVEIRA; TEIXEIRA, JR., MAURO; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Biogeographic links between southern Atlantic Forest and western South America: Rediscovery, re-description, and phylogenetic relationships of two rare montane anole lizards from Brazil. Molecular Phylogenetics and Evolution, v. 113, p. 49-58, AUG 2017. (13/50297-0, 03/10335-8, 11/50146-6)

RECODER, RENATO; PRATES, IVAN; MARQUES-SOUZA, SERGIO; CAMACHO, AGUSTIN; NUNES, PEDRO M. SALES; DAL VECHIO, FRANCISCO; GHELLERE, JOSE MARIO; MCDIARMID, ROY W.; RODRIGUES, MIGUEL TREFAUT. Lizards from the Lost World: two new species and evolutionary relationships of the Pantepui highland Riolama (Gymnophthalmidae). ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. 190, n. 1, p. 271-297, SEP 2020. (13/50297-0, 12/15754-8, 11/50146-6)

BROWN, JASON L.; HILL, DANIEL J.; DOLAN, AISLING M.; CARNAVAL, ANA C.; HAYWOOD, ALAN M.. PaleoClim, high spatial resolution paleoclimate surfaces for global land areas. SCIENTIFIC DATA, v. 5, NOV 13 2018. (13/50297-0)

LANNA, FLAVIA; WERNECK, FERNANDA; GEHARA, MARCELO; FONSECA, EMANUEL; COLLI, GUARINO; SITES, JR., JACK; RODRIGUES, MIGUEL; GARDA, ADRIAN. The evolutionary history of Lygodactylus lizards in the South American open diagonal. Molecular Phylogenetics and Evolution, v. 127, p. 638-645, OCT 2018. (13/50297-0, 03/10335-8, 11/50146-6)

DEININGER, MICHAEL; WARD, BRITTANY MARIE; NOVELLO, VALDIR F.; CRUZ, FRANCISCO W.. Late Quaternary Variations in the South American Monsoon System as Inferred by Speleothems-New Perspectives Using the SISAL Database. QUATERNARY, v. 2, n. 1, MAR 2019. (13/50297-0, 18/12285-3, 17/50085-3, 16/15807-5)

XUE, ALEXANDER T.; RUGGIERO, ROBERT P.; HICKERSON, MICHAEL J.; BOISSINOT, STEPHANE. Differential Effect of Selection against LINE Retrotransposons among Vertebrates Inferred from Whole-Genome Data and Demographic Modeling. GENOME BIOLOGY AND EVOLUTION, v. 10, n. 5, p. 1265-1281, MAY 2018. (13/50297-0)

MELO-SAMPAIO, PAULO R.; DE OLIVEIRA, RENAN M.; PRATES, IVAN. A New Nurse Frog from Brazil (Aromobatidae: Allobates), with Data on the Distribution and Phenotypic Variation of Western Amazonian Species. South American Journal of Herpetology, v. 13, n. 2, p. 131-149, AUG 2018. (13/50297-0)

STURARO, MARCELO JOSE; RODRIGUES, MIGUEL T.; COLLI, GUARINO R.; KNOWLES, L. LACEY; AVILA-PIRES, TERESA C. S.. Integrative taxonomy of the lizards Cercosaura ocellata species complex (Reptilia: Gymnophthalmidae). ZOOLOGISCHER ANZEIGER, v. 275, p. 37-65, JUL 2018. (13/50297-0, 03/10335-8, 11/50146-6)

BIANCALANA, RENATA NEVES; DO AMARAL, FABIO RAPOSO; BIONDO, CIBELE. Novel microsatellites for Cypseloides fumigatus, cross-amplifiable in Streptoprocne zonaris. REVISTA BRASILEIRA DE ORNITOLOGIA, v. 27, n. 3, p. 207-211, SEP 2019. (11/50143-7, 13/50297-0, 11/23155-4)

FONSECA, LUIZ HENRIQUE M.; LOHMANN, LUCIA G.. A new species of Adenocalymma (Bignonieae, Bignoniaceae) from Minas Gerais, Brazil. BRITTONIA, v. 71, n. 2, p. 183-189, JUN 2019. (13/50297-0, 11/50859-2, 12/50260-6)

GARCIA, GUILHERME P. B.; GROHMANN, CARLOS H.. DEM-based geomorphological mapping and landforms characterization of a tropical karst environment in southeastern Brazil. Journal of South American Earth Sciences, v. 93, p. 14-22, AUG 2019. (16/06628-0, 13/50297-0)

OVERCAST, ISAAC; EMERSON, BRENT C.; HICKERSON, MICHAEL J.. An integrated model of population genetics and community ecology. Journal of Biogeography, v. 46, n. 4, p. 816-829, APR 2019. (13/50297-0)

PINTO-DA-ROCHA, RICARDO; BRAGAGNOLO, CIBELE. Cladistic analysis of the family Nomoclastidae with descriptions of a new genus and eight new species (Opiliones, Laniatores). INVERTEBRATE SYSTEMATICS, v. 31, n. 1, p. 91-123, 2017. (13/50297-0)

MAGALDI, LUIZA MORAES; KAMINSKI, LUCAS AUGUSTO; SERAPHIM, NOEMY; AZEREDO-ESPIN, ANA MARIA; SILVA-BRANDA, KARINA LUCAS; FREITAS, ANDRE VICTOR LUCCI. Hidden in the wing dots: Disentangling mimetic sister species of butterflies (Riodinidae: Stalachtis) with an integrative approach. ZOOLOGISCHER ANZEIGER, v. 294, p. 92-99, SEP 2021. (11/50225-3, 12/16266-7, 12/50260-6, 13/50297-0, 15/24663-4, 10/51340-8)

LOURENCO, GISELLE M.; DATTILO, WESLEY; RIBEIRO, SERVIO P.; FREITAS, ANDRE V. L.. iological Aspects and Movements of Neotropical Fruit-Feeding Butterflie. Neotropical Entomology, v. 51, n. 1, SEP 2021. (13/50297-0)

LUCCI FREITAS, ANDRE VICTOR; GUERATTO, PATRICIA EYNC; NASCIMENTO, ANDRE RANGEL. NEW RECORDS OF HIGH ALTITUDE ACTINOTE (NYMPHALIDAE: HELICONIINAE) FROM CENTRAL BRAZIL EXTEND THE KNOWN DISTRIBUTION BY 650 KM. JOURNAL OF THE LEPIDOPTERISTS' SOCIETY, v. 73, n. 3, p. 208-210, SEP 6 2019. (11/50225-3, 13/50297-0)

RIVERA, DANIELLE; PRATES, IVAN; RODRIGUES, MIGUEL TREFAUT; CARNAVAL, ANA CAROLINA. Effects of climate and geography on spatial patterns of genetic structure in tropical skinks. Molecular Phylogenetics and Evolution, v. 143, FEB 2020. (03/10335-8, 11/50146-6, 13/50297-0)

LOURENCO, G. M.; LUNA, P.; GUEVARA, R.; DATTILO, W.; FREITAS, A. V. L.; RIBEIRO, S. P.. Temporal shifts in butterfly diversity: responses to natural and anthropic forest transitions. JOURNAL OF INSECT CONSERVATION, v. 24, n. 2, DEC 2019. (11/50225-3, 13/50297-0)

XUE, ALEXANDER T.; HICKERSON, MICHAEL J.. Comparative phylogeographic inference with genome-wide data from aggregated population pairs. Evolution, v. 74, n. 5, p. 808-830, MAY 2020. (13/50297-0)

GAINETT, GUILHERME; SHARMA, PRASHANT P.; FERNANDES, NATHALIA; PINTO-DA-ROCHA, RICARDO; GIRIBET, GONZALO; WILLEMART, RODRIGO HIRATA. Evolution of a sensory cluster on the legs of Opiliones (Arachnida) informs multi-level phylogenetic relationships. ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. 187, n. 1, p. 143-165, SEP 2019. (10/00915-0, 13/23189-1, 13/50297-0, 14/07671-0, 15/01518-9)

MACEDO, GABRIEL; SILVA, MARCO; DO AMARAL, FABIO RAPOSO; MALDONADO-COELHO, MARCOS. Symmetrical discrimination despite weak song differentiation in 2 suboscine bird sister species. BEHAVIORAL ECOLOGY, v. 30, n. 5, p. 1205-1215, SEP-OCT 2019. (11/50143-7, 16/11439-1, 13/50297-0, 15/18287-0, 11/23155-4)

PINAYA, JORGE L. D.; CRUZ, FRANCISCO W.; CECCANTINI, GREGORIO C. T.; CORREA, PEDRO L. P.; PITMAN, NIGEL; VEMADO, FELIPE; LOPEZ, MARIA DEL C. ARMEN S.; PEREIRA FILHO, AUGUSTO J.; GROHMANN, CARLOS H.; CHIESSI, CRISTIANO M.; et al. Brazilian montane rainforest expansion induced by Heinrich Stadial 1 event. SCIENTIFIC REPORTS, v. 9, NOV 29 2019. (15/50683-2, 16/04982-0, 13/50297-0, 17/50085-3)

MELO-SAMPAIO, PAULO R.; PRATES, IVAN; PELOSO, PEDRO L. V.; RECODER, RENATO; DAL VECHIO, FRANCISCO; MARQUES-SOUZA, SERGIO; RODRIGUES, MIGUEL T.. A new nurse frog from Southwestern Amazonian highlands, with notes on the phylogenetic affinities of Allobates alessandroi (Aromobatidae). Journal of Natural History, v. 54, n. 1-4, p. 20-pg., 2020-03-01. (11/50146-6, 13/50297-0)

MASCARENHAS, RILQUER; MIYAKI, CRISTINA YUMI; DOBROVOLSKI, RICARDO; BATALHA-FILHO, HENRIQUE. Late Pleistocene climate change shapes population divergence of an Atlantic Forest passerine: a model-based phylogeographic hypothesis test. JOURNAL OF ORNITHOLOGY, v. 160, n. 3, p. 16-pg., 2019-07-01. (09/12989-1, 13/50297-0)

FREITAS, A. V. L.; FRANCINI, R. B.; MIELKE, O. H. H.; ROSA, A. H. B.; MAGALDI, L. M.; SILVA-BRANDAO, K. L.. A New and Rare Actinote Hubner (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini) from Southeastern Brazil. Neotropical Entomology, v. 49, n. 5, p. 696-703, OCT 2020. (11/50225-3, 15/24663-4, 13/50297-0)

XUE, ALEXANDER T.; HICKERSON, MICHAEL J.. Comparative phylogeographic inference with genome-wide data from aggregated population pairs. Evolution, APR 2020. (13/50297-0)

GOMEZ-BAHAMON, VALENTINA; MARQUEZ, ROBERTO; JAHN, ALEX E.; MIYAKI, CRISTINA YUMI; TUERO, DIEGO T.; LAVERDE-R, OSCAR; RESTREPO, SILVIA; DANIEL CADENA, CARLOS. Speciation Associated with Shifts in Migratory Behavior in an Avian Radiation. Current Biology, v. 30, n. 7, p. 1312+, APR 6 2020. (13/50297-0, 12/17225-2)

BATALHA-FILHO, HENRIQUE; MALDONADO-COELHO, MARCOS; MIYAKI, CRISTINA YUMI. Historical climate changes and hybridization shaped the evolution of Atlantic Forest spinetails (Aves: Furnariidae). HEREDITY, v. 123, n. 5, p. 675-693, NOV 2019. (13/50297-0, 08/05705-4)

THOM, GREGORY; RIBAS, CAMILA C.; SHULTZ, EDUARDO; ALEIXO, ALEXANDRE; MIYAKI, CRISTINA Y.. Population dynamics of Amazonian floodplain forest species support spatial variation on genetic diversity but not range expansions through time. Journal of Biogeography, v. 49, n. 10, p. 11-pg., 2022-09-08. (14/00113-2, 13/50297-0, 15/12551-7, 17/25720-7, 12/50260-6, 18/17869-3)

MACHADO PELLEGRINO, KATIA CRISTINA; BRUNES, TULIANA OLIVEIRA; SOUZA, SERGIO MARQUES; LAGUNA, MARCIA MARIA; SAUER AVILA-PIRES, TERESA CRISTINA; HOOGMOED, MARINUS STEVEN; RODRIGUES, MIGUEL TREFAUT. On the distinctiveness of Amapasaurus, its relationship with Loxopholis Cope 1869, and description of a new genus for L. guianensis and L. hoogmoedi (Gymnophthalmoidea/Ecpleopodini: Squamata). Zootaxa, v. 4441, n. 2, p. 332-346, JUN 27 2018. (13/50297-0, 03/10335-8, 11/50146-6, 12/10163-1, 16/03146-4)

KURY, ADRIANO B.; PINTO-DA-ROCHA, RICARDO; GRUBER, JURGEN; CARVALHO, RAFAEL N.. Clarification of three species of Discocyrtus Holmberg, 1878 with convoluted taxonomic histories (Opiliones: Laniatores: Gonyleptidae: Pachylinae). JOURNAL OF ARACHNOLOGY, v. 46, n. 2, p. 355-369, AUG 2018. (13/50297-0, 12/02969-6)

TALAVERA, GERARD; KAMINSKI, LUCAS A.; FREITAS, ANDRE V. L.; VILA, ROGER. One-note samba: the biogeographical history of the relict Brazilian butterfly Elkalyce cogina. Journal of Biogeography, v. 43, n. 4, p. 727-737, APR 2016. (13/50297-0, 11/50225-3, 12/50260-6)

BATALHA-FILHO, HENRIQUE; MIYAKI, CRISTINA Y.. Late Pleistocene divergence and postglacial expansion in the Brazilian Atlantic Forest: multilocus phylogeography of Rhopias gularis (Aves: Passeriformes). JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH, v. 54, n. 2, p. 137-147, MAY 2016. (13/50297-0, 08/05705-4)

CAMACHO, AGUSTIN; RECODER, RENATO; TEIXEIRA, JR., MAURO; KOHLSDORF, TIANA; RODRIGUES, MIGUEL TREFAUT; LEE, MICHAEL S. Y.. Overcoming phylogenetic and geographic uncertainties to test for correlates of range size evolution in gymnophthalmid lizards. ECOGRAPHY, v. 40, n. 6, p. 764-773, JUN 2017. (13/50297-0, 12/15754-8, 03/10335-8, 11/18868-1, 11/50146-6)

MARQUARDT, GISELE C.; BICUDO, DENISE C.; BICUDO, CARLOS E. DE M.; LEDRU, MARIE-PIERRE; ECTOR, LUC; WETZEL, CARLOS E.. Pseudostaurosira crateri sp. nov. (Fragilariaceae, Bacillariophyta), a new small araphid, fossil diatom species from the Pleistocene (Atlantic Forest, Brazil). PHYTOTAXA, v. 496, n. 2, p. 105-120, APR 12 2021. (17/50341-0, 13/50297-0)

PIRANI, RENATA M.; WERNECK, FERNANDA P.; THOMAZ, ANDREA T.; KENNEY, MARIAH L.; STURARO, MARCELO J.; AVILA-PIRES, TERESA C. S.; PELOSO, PEDRO L. V.; RODRIGUES, MIGUEL T.; LACEY KNOWLES, L.. Testing main Amazonian rivers as barriers across time and space within widespread taxa. Journal of Biogeography, v. 46, n. 11, p. 2444-2456, NOV 2019. (13/50297-0, 14/22444-0, 11/50146-6)

PAZ, ANDREA; SILVA, THIAGO S.; CARNAVAL, ANA C.. A framework for near-real time monitoring of diversity patterns based on indirect remote sensing, with an application in the Brazilian Atlantic rainforest. PEERJ COMPUTER SCIENCE, v. 10, p. 25-pg., 2022-06-29. (13/50297-0)

TRUJILLO-ARIAS, NATALIA; JOSE RODRIGUEZ-CAJARVILLE, MARIA; SARI, ELOISA; MIYAKI, CRISTINA Y.; SANTOS, FABRICIO R.; WITT, CHRISTOPHER C.; BARREIRA, ANA S.; GOMEZ, ISABEL; NAOKI, KAZUYA; TUBARO, PABLO L.; et al. Evolution between forest macrorefugia is linked to discordance between genetic and morphological variation in Neotropical passerines. Molecular Phylogenetics and Evolution, v. 149, AUG 2020. (13/50297-0)

MORENO-GONZALEZ, JAIRO A.; PINTO-DA-ROCHA, RICARDO; GALLAO, JONAS E.. Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZOOKEYS, n. 1075, p. 33-75, DEC 7 2021. (15/18376-2, 10/08459-4, 13/50297-0)

KAMINSKI, LUCAS A.; SOARES, GLORIA R.; SERAPHIM, NOEMY; WAHLBERG, NIKLAS; MARINI-FILHO, ONILDO J.; FREITAS, ANDRE V. L.. Natural history and systematic position of Rhetus belphegor (n. comb.) (Lepidoptera: Riodinidae), an endangered butterfly with narrow distribution in Southeast Brazil. JOURNAL OF INSECT CONSERVATION, v. 19, n. 6, p. 11-pg., 2015-12-01. (13/50297-0, 11/50225-3)

EATON, DEREN A. R.; OVERCAST, ISAAC. ipyrad: Interactive assembly and analysis of RADseq datasets. Bioinformatics, v. 36, n. 8, p. 2592-2594, APR 15 2020. (13/50297-0)

OVERCAST, ISAAC; RUFFLEY, MEGAN; ROSINDELL, JAMES; HARMON, LUKE; BORGES, V, PAULO A.; EMERSON, BRENT C.; ETIENNE, RAMPAL S.; GILLESPIE, ROSEMARY; KREHENWINKEL, HENRIK; MAHLER, D. LUKE; et al. A unified model of species abundance, genetic diversity, and functional diversity reveals the mechanisms structuring ecological communities. MOLECULAR ECOLOGY RESOURCES, v. 21, n. 8, SI, OCT 2021. (13/50297-0)

ROSA, AUGUSTO H. B.; HUERTAS, BLANCA; WILLMOTT, KEITH R.; BARBOSA, EDUARDO P.; MACHADO, PATRICIA A.; MIELKE, OLAF H. H.; CANAAN, CARLOS H. P.; FREITAS, ANDRE V. L.. Fifty years without a name: a new species of Splendeuptychia Forster (Lepidoptera: Nymphalidae: Satyrinae). Zootaxa, v. 5061, n. 1, p. 95-114, NOV 3 2021. (13/50297-0, 16/15873-8, 18/21432-0, 12/03750-8, 11/50225-3)

DAMASCENO, ROBERTA P.; CARNAVAL, ANA CAROLINA; SASS, CHODON; RECODER, RENATO SOUSA; MORITZ, CRAIG; RODRIGUES, MIGUEL TREFAUT. Geographic restriction, genetic divergence, and morphological disparity in the Brazilian Atlantic Forests: Insights from Leposoma lizards (Gymnophthalmidae, Squamata). Molecular Phylogenetics and Evolution, v. 154, JAN 2021. (03/10335-8, 11/50146-6, 15/11498-5, 13/50297-0, 13/22477-3)

MORENO-GONZALEZ, JAIRO A.; PINTO-DA-ROCHA, RICARDO; CABRA-GARCIA, JIMMY. On the Tityus forcipula species group: redescription of Tityus forcipula (Scorpiones, Buthidae), description of a new Andean species, and notes on the taxonomy of the group. Zootaxa, v. 5155, n. 2, p. 36-pg., 2022-06-21. (13/50297-0, 15/18376-2)

MORAES, SIMEAO S.; MONTEBELLO, YGOR; STANTON, MARIANA A.; YAMAGUCHI, LYDIA FUMIKO; KATO, MASSUO J.; FREITAS, ANDRE V. L.. Description of three new species of Geometridae (Lepidoptera) using species delimitation in an integrative taxonomy approach for a cryptic species complex. PeerJ, v. 9, MAY 18 2021. (11/50225-3, 13/50297-0, 19/02727-1, 15/26823-9, 15/17047-5, 16/20196-5, 12/50260-6)

MALDONADO-COELHO, MARCOS; DOS SANTOS, SIDNEI S.; ISLER, MORTON L.; SVENSSON-COELHO, MARIA; SOTELO-MUNOZ, MANUELITA; MIYAKI, CRISTINA Y.; RICKLEFS, ROBERT E.; BLAKE, JOHN G.. Evolutionary and Ecological Processes Underlying Geographic Variation in Innate Bird Songs. American Naturalist, v. 202, n. 2, p. 22-pg., 2023-08-01. (13/50297-0)

ROSA, AUGUSTO HENRIQUE BATISTA; BARBOSA, EDUARDO DE PROENCA; MACHADO, PATRICIA AVELINO; SIEWERT, RICARDO RUSSO; FREITAS, ANDRE VICTOR LUCCI. Dasyophthalma (Lepidoptera: Nymphalidae: Satyrinae): systematics, distribution, and conservation perspectives of a butterfly genus endemic from the Brazilian Atlantic Forest. ARTHROPOD SYSTEMATICS & PHYLOGENY, v. 81, p. 19-pg., 2023-05-23. (21/13396-6, 18/21432-0, 21/03868-8, 13/50297-0, 16/15873-8, 20/09595-0, 12/03750-8)

DORE, MAEL; WILLMOTT, KEITH; LAVERGNE, SEBASTIEN; CHAZOT, NICOLAS; FREITAS, ANDRE V. L.; FONTAINE, COLIN; ELIAS, MARIANNE. Mutualistic interactions shape global spatial congruence and climatic niche evolution in Neotropical mimetic butterflies. ECOLOGY LETTERS, v. 26, n. 6, p. 15-pg., 2023-03-17. (12/50260-6, 13/50297-0)

RODRIGUEZ-ZORRO, PAULA A.; LEDRU, MARIE-PIERRE; FAVIER, CHARLY; BARD, EDOUARD; BICUDO, DENISE C.; GARCIA, MARTA; MARQUARDT, GISELE; ROSTEK, FRAUKE; SAWAKUCHI, ANDRE O.; SIMON, QUENTIN; et al. Alternate Atlantic forest and climate phases during the early Pleistocene 41 kyr cycles in southeastern Brazil. QUATERNARY SCIENCE REVIEWS, v. 286, p. 15-pg., 2022-05-18. (13/50297-0)

PIRANI, RENATA M.; PELOSO, V, PEDRO L.; PRADO, JOYCE R.; POLO, ERICO M.; KNOWLES, L. LACEY; RON, SANTIAGO R.; RODRIGUES, MIGUEL T.; STURARO, MARCELO J.; WERNECK, FERNANDA P.. Diversification history of clown tree frogs in Neotropical rainforests (Anura, Hylidae, Dendropsophus leucophyllatus group). Molecular Phylogenetics and Evolution, v. 150, SEP 2020. (03/10335-8, 11/50146-6, 13/50297-0, 14/22444-0)

BARBOSA, EDUARDO P.; AGUIAR, TAMARA M. C.; ROSA, AUGUSTO H. B.; ZACCA, THAMARA; FREITAS, ANDRE V. L.. A new species of butterfly (Lepidoptera: Nymphalidae) from the highlands of Southeastern Brazil. Zootaxa, v. 4819, n. 1, p. 128-142, JUL 22 2020. (17/02264-6, 11/50225-3, 12/50260-6, 13/50297-0)

PAZ, ANDREA; BROWN, JASON L.; CORDEIRO, CARLOS L. O.; AGUIRRE-SANTORO, JULIAN; ASSIS, CLAYDSON; AMARO, RENATA CECILIA; RAPOSO DO AMARAL, FABIO; BOCHORNY, THUANE; BACCI, LUCAS F.; CADDAH, MAYARA K.; et al. Environmental correlates of taxonomic and phylogenetic diversity in the Atlantic Forest. Journal of Biogeography, v. 48, n. 6, MAR 2021. (11/50143-7, 13/50297-0, 03/10335-8, 11/50146-6, 18/03428-5, 11/50225-3, 17/26162-8, 11/23155-4)

BEERAVOLU, CHAMPAK R.; HICKERSON, MICHAEL J.; FRANTZ, LAURENT A. F.; LOHSE, KONRAD. ABLE: blockwise site frequency spectra for inferring complex population histories and recombination. GENOME BIOLOGY, v. 19, p. 16-pg., 2018-09-25. (13/50297-0)

NAKAHARA, SHINICHI; KLECKNER, KAYLIN; BARBOSA, EDUARDO P.; LOURENCO, GISELLE M.; CASAGRANDE, MIRNA M.; WILLMOTT, KEITH R.; FREITAS, ANDRE V. L.. Reassessment of the type locality of Euptychia stigmatica Godman, 1905, with the description of two new sibling species from Amazonia (Lepidoptera, Nymphalidae, Satyrinae, Satyrini). ZOOKEYS, v. N/A, n. 1167, p. 32-pg., 2023-06-14. (16/15873-8, 13/50297-0, 18/21432-0, 21/03868-8)

FREITAS, ANDRE V. L.; BARBOSA, EDUARDO P.; ZACCA, THAMARA; MARIN, MARIO ALEJANDRO; BEIRAO, MARINA, V; SILVA, ANDRE R. M.; CASAGRANDE, MIRNA M.; ESPELAND, MARIANNE; WILLMOTT, KEITH R.. Before it is too late: description of a new genus and species of butterfly from a highly threatened Brazilian biome. Revista Brasileira de Entomologia, v. 62, n. 2, p. 11-pg., 2018-04-01. (17/02264-6, 13/50297-0, 12/50260-6, 14/16481-0, 11/50225-3, 16/15873-8)

BENEDETTI, ALIPIO REZENDE; PINTO-DA-ROCHA, RICARDO. Systematic revision and total evidence phylogenetic analysis of the Andean family Metasarcidae Kury, 1994 (Opiliones: Laniatores), with description of two new genera and twenty new species. ARTHROPOD SYSTEMATICS & PHYLOGENY, v. 80, p. 80-pg., 2022-08-16. (13/50297-0)

TEIXEIRA, MAURO, JR.; PRATES, IVAN; NISA, CAROLINA; CAMARAO SILVA-MARTINS, NATHALIA SUZAN; STRUESSMANN, CHRISTINE; RODRIGUES, MIGUEL TREFAUT. Molecular data reveal spatial and temporal patterns of diversification and a cryptic new species of lowland Stenocercus Dumeril & Bibron, 1837 (Squamata: Tropiduridae). Molecular Phylogenetics and Evolution, v. 94, p. 14-pg., 2016-01-01. (13/50297-0, 11/50146-6, 03/10335-8)

MERCIER, KATHRYN P.; VASCONCELLOS, MARIANA M.; MARTINS, EUDER G. A.; PIRANI, JOSE RUBENS; MICHELANGELI, FABIAN A.; CARNAVAL, ANA CAROLINA. Linking environmental stability with genetic diversity and population structure in two Atlantic Forest palm trees. Journal of Biogeography, v. 50, n. 1, p. 12-pg., 2022-10-31. (13/50297-0)

DE ANDRADE ALESSANDRA, RODRIGUES SANTOS; DE AZEVEDO KOCH, ELMO BORGES; DO AMARAL NOGUEIRA, ANDRE; PINTO-DA-ROCHA, RICARDO; BRAGAGNOLO, CIBELE; LORENZO, EVERTON; DASILVA, MARCIO BERNARDINO; DELABIE JACQUES, HUBERT CHARLES. Evaluating higher taxa as surrogates of harvestmen biodiversity (Arachnida: Opiliones) along a latitudinal gradient in the Atlantic Forest. AUSTRAL ECOLOGY, v. 48, n. 1, p. 21-pg., 2022-11-14. (13/50297-0, 13/23736-2)

ANDRADE, ALESSANDRA RODRIGUES SANTOS DE; LIRA, ANDRE FELIPE DE ARAUJO; SALOMAO, RENATO PORTELA; ALVARADO, FREDY; DESOUZA, ADRIANO MEDEIROS; DASILVA, MARCIO B.; DELABIE, JACQUES HUBERT CHARLES. Environmental drivers of harvestmen assemblages (Arachnida: Opiliones) from Neotropical rainforest landscapes. AUSTRAL ENTOMOLOGY, v. 61, n. 4, p. 14-pg., 2022-11-23. (13/50297-0)

PINTO-DA-ROCHA, RICARDO; ANDRADE, RENATA; MORENO-GONZALEZ, JAIRO A.. Two new cave-dwelling genera of short-tailed whip-scorpions from Brazil (Arachnida: Schizomida: Hubbardiidae). ZOOLOGIA, v. 33, n. 2, p. 9-pg., 2016-01-01. (13/50297-0)

DOS SANTOS, JESSIE PEREIRA; ISERHARD, CRISTIANO AGRA; OLIVEIRA CARREIRA, JUNIA YASMIN; LUCCI FREITAS, ANDRE VICTOR. Monitoring fruit-feeding butterfly assemblages in two vertical strata in seasonal Atlantic Forest: temporal species turnover is lower in the canopy. JOURNAL OF TROPICAL ECOLOGY, v. 33, p. 11-pg., 2017-09-01. (11/50225-3, 13/50297-0, 11/08433-8)

ROSA, AUGUSTO H. B.; RIBEIRO, D. B.; FREITAS, ANDRE V. L.. How data curation and new geographical records can change the conservation status of threatened brazilian butterflies. JOURNAL OF INSECT CONSERVATION, v. 27, n. 3, p. 12-pg., 2023-02-18. (11/50225-3, 13/50297-0, 21/03868-8)

STRANGAS, MARIA L.; NAVAS, CARLOS A.; RODRIGUES, MIGUEL T.; CARNAVAL, ANA C.. Thermophysiology, microclimates, and species distributions of lizards in the mountains of the Brazilian Atlantic Forest. ECOGRAPHY, v. 42, n. 2, p. 11-pg., 2019-02-01. (08/57687-0, 13/50297-0, 11/50146-6, 03/10335-8)

FONSECA, EMANUEL M.; GEHARA, MARCELO; WERNECK, FERNANDA P.; LANNA, FLAVIA M.; COLLI, GUARINO R.; SITES, JACK W., JR.; RODRIGUES, MIGUEL T.; GARDA, ADRIAN A.. Diversification with gene flow and niche divergence in a lizard species along the South American "diagonal of open formations". Journal of Biogeography, v. 45, n. 7, p. 13-pg., 2018-07-01. (13/50297-0, 11/50146-6, 03/10335-8)

MENDONCA DANTAS, GISELE PIRES; REIS SARI, ELOISA HELENA; CABANNE, GUSTAVO SEBASTIAN; PESSOA, RODRIGO OLIVEIRA; MARINI, MIGUEL ANGELO; MIYAKI, CRISTINA YUMI; SANTOS, FABRICIO RODRIGUES. Population genetic structure of the Atlantic Forest endemic Conopophaga lineata (Passeriformes: Conopophagidae) reveals a contact zone in the Atlantic Forest. JOURNAL OF ORNITHOLOGY, v. 156, n. 1, p. 15-pg., 2015-01-01. (13/50297-0)

BRAGAGNOLO, CIBELE; HARA, MARCOS R.; PINTO-DA-ROCHA, RICARDO. A new family of Gonyleptoidea from South America (Opiliones, Laniatores). ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. 173, n. 2, p. 24-pg., 2015-02-01. (09/17206-5, 08/06604-7, 12/02969-6, 13/50297-0)

ANDRÉ VICTOR LUCCI FREITAS; RONALDO BASTOS FRANCINI; MÁRLON PALUCH; EDUARDO PROENÇA BARBOSA. A new species of Actinote Hübner (Nymphalidae: Heliconiinae: Acraeini) from southeast Brazil. Revista Brasileira de Entomologia, v. 62, n. 2, p. 135-147, 2018-06-00. (11/50225-3, 16/15873-8, 13/50297-0, 12/03750-8)

MASCARENHAS, RILQUER; MIYAKI, CRISTINA YUMI; DOBROVOLSKI, RICARDO; BATALHA-FILHO, HENRIQUE. Late Pleistocene climate change shapes population divergence of an Atlantic Forest passerine: a model-based phylogeographic hypothesis test. JOURNAL OF ORNITHOLOGY, v. 160, n. 3, p. 733-748, JUL 2019. (09/12989-1, 13/50297-0)

BEERAVOLU, CHAMPAK R.; HICKERSON, MICHAEL J.; FRANTZ, LAURENT A. F.; LOHSE, KONRAD. ABLE: blockwise site frequency spectra for inferring complex population histories and recombination. Genome Biology, v. 19, SEP 25 2018. (13/50297-0)

FREITAS, A. V. L.; FRANCINI, R. B.; MIELKE, O. H. H.; ROSA, A. H. B.; MAGALDI, L. M.; SILVA-BRANDAO, K. L.. A New and RareActinoteHubner (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini) from Southeastern Brazil. Neotropical Entomology, MAY 2020. (13/50297-0, 11/50225-3, 15/24663-4)

FILGUEIRAS, BRUNO K. C.; MELO, DOUGLAS H. A.; LEAL, INARA R.; TABARELLI, MARCELO; FREITAS, ANDRE VICTOR L.; IANNUZZI, LUCIANA. Fruit-feeding butterflies in edge-dominated habitats: community structure, species persistence and cascade effect. Journal of Insect Conservation, v. 20, n. 3, p. 539-548, JUN 2016. (13/50297-0, 11/50225-3)

PRATES, IVAN; XUE, ALEXANDER T.; BROWN, JASON L.; ALVARADO-SERRANO, DIEGO F.; RODRIGUES, MIGUEL T.; HICKERSON, MICHAEL J.; CARNAVAL, ANA C.. Inferring responses to climate dynamics from historical demography in neotropical forest lizards. Proceedings of the National Academy of Sciences of the United States of America, v. 113, n. 29, p. 7978-7985, JUL 19 2016. (13/50297-0, 03/10335-8, 11/50146-6)

MELO-SAMPAIO, PAULO R.; PRATES, IVAN; PELOSO, PEDRO L. V.; RECODER, RENATO; DAL VECHIO, FRANCISCO; MARQUES-SOUZA, SERGIO; RODRIGUES, MIGUEL T.. A new nurse frog from Southwestern Amazonian highlands, with notes on the phylogenetic affinities of Allobates alessandroi (Aromobatidae). Journal of Natural History, v. 54, n. 1-4, SI, MAR 2020. (13/50297-0, 11/50146-6)

PESSOA-SILVA, MARILIA; HARA, MARCOS RYOTARO; PINTO-DA-ROCHA, RICARDO. Revision of the southern Andean genus Sadocus Sorensen, 1886 (Opiliones, Gonyleptidae, Pachylinae). ZOOKEYS, n. 1025, p. 91-137, MAR 22 2021. (18/07193-2, 13/50297-0)

MORAES, SIMEAO DE SOUZA; MURILLO-RAMOS, LEIDYS; MACHADO, PATRICIA A.; GHANAVI, HAMID R.; MAGALDI, LUIZA M.; SILVA-BRANDAO, KARINA L.; KATO, MASSUO J.; FREITAS, ANDRE V. L.; WAHLBERG, NIKLAS. A double-edged sword: Unrecognized cryptic diversity and taxonomic impediment in Eois (Lepidoptera, Geometridae). ZOOLOGICA SCRIPTA, APR 2021. (15/24663-4, 15/17047-5, 13/50297-0, 11/50225-3, 16/20196-5, 12/50260-6)

STRANGAS, MARIA L.; NAVAS, CARLOS A.; RODRIGUES, MIGUEL T.; CARNAVAL, ANA C.. Thermophysiology, microclimates, and species distributions of lizards in the mountains of the Brazilian Atlantic Forest. ECOGRAPHY, v. 42, n. 2, SI, p. 354-364, FEB 2019. (08/57687-0, 13/50297-0, 03/10335-8, 11/50146-6)

PRATES, IVAN; RODRIGUES, MIGUEL TREFAUT; MELO-SAMPAIO, PAULO ROBERTO; CARNAVAL, ANA CAROLINA. Phylogenetic relationships of Amazonian anole lizards (Dactyloa): Taxonomic implications, new insights about phenotypic evolution and the timing of diversification. Molecular Phylogenetics and Evolution, v. 82, n. A, p. 258-268, JAN 2015. (13/50297-0, 03/10335-8, 11/50146-6)

MORI, BRUNO JACOB; PINTO-DA-ROCHA, RICARDO. Taxonomic revision of Parampheres (Arachnida: Opiliones: Gonyleptidae). Zoologia, v. 31, n. 6, p. 541-556, DEC 2014. (13/50297-0)

MENDONCA DANTAS, GISELE PIRES; REIS SARI, ELOISA HELENA; CABANNE, GUSTAVO SEBASTIAN; PESSOA, RODRIGO OLIVEIRA; MARINI, MIGUEL ANGELO; MIYAKI, CRISTINA YUMI; SANTOS, FABRICIO RODRIGUES. Population genetic structure of the Atlantic Forest endemic Conopophaga lineata (Passeriformes: Conopophagidae) reveals a contact zone in the Atlantic Forest. JOURNAL OF ORNITHOLOGY, v. 156, n. 1, p. 85-99, JAN 2015. (13/50297-0)

KAMINSKI, LUCAS A.; SOARES, GLORIA R.; SERAPHIM, NOEMY; WAHLBERG, NIKLAS; MARINI-FILHO, ONILDO J.; FREITAS, ANDRE V. L.. Natural history and systematic position of Rhetus belphegor (n. comb.) (Lepidoptera: Riodinidae), an endangered butterfly with narrow distribution in Southeast Brazil. Journal of Insect Conservation, v. 19, n. 6, p. 1141-1151, DEC 2015. (13/50297-0, 11/50225-3)

FREITAS, ANDRE V. L.; BARBOSA, EDUARDO P.; ZACCA, THAMARA; MARIN, MARIO ALEJANDRO; BEIRAO, V, MARINA; SILVA, ANDRE R. M.; CASAGRANDE, MIRNA M.; ESPELAND, MARIANNE; WILLMOTT, KEITH R.. Before it is too late: description of a new genus and species of butterfly from a highly threatened Brazilian biome. Revista Brasileira de Entomologia, v. 62, n. 2, p. 148-158, APR-JUN 2018. (14/16481-0, 12/50260-6, 16/15873-8, 11/50225-3, 17/02264-6, 13/50297-0)

CASTRO-PEREIRA, DANIEL; PERES, ELEN A.; PINTO-DA-ROCHA, RICARDO. Systematics and phylogeography of the Brazilian Atlantic Forest endemic harvestmen Neosadocus Mello-LeitAo, 1926 (Arachnida: Opiliones: Gonyleptidae). PLoS One, v. 16, n. 6, JUN 2 2021. (13/50297-0, 16/13129-0)

MATOS-MARAVI, PAVEL; WAHLBERG, NIKLAS; FREITAS, ANDRE V. L.; DEVRIES, PHIL; ANTONELLI, ALEXANDRE; PENZ, CARLA M.. Mesoamerica is a cradle and the Atlantic Forest is a museum of Neotropical butterfly diversity: insights from the evolution and biogeography of Brassolini (Lepidoptera: Nymphalidae). Biological Journal of the Linnean Society, v. 133, n. 3, p. 704-724, JUL 2021. (13/50297-0, 12/50260-6, 11/50225-3)

FOUQUET, ANTOINE; LEBLANC, KILLIAN; FRAMIT, MARLENE; REJAUD, ALEXANDRE; RODRIGUES, MIGUEL T.; CASTROVIEJO-FISHER, SANTIAGO; PELOSO, V, PEDRO L.; PRATES, IVAN; MANZI, SOPHIE; SUESCUN, UXUE; et al. Species diversity and biogeography of an ancient frog clade from the Guiana Shield (Anura: Microhylidae: Adelastes, Otophryne, Synapturanus) exhibiting spectacular phenotypic diversification. Biological Journal of the Linnean Society, v. 132, n. 2, p. 233-256, FEB 2021. (12/15754-8, 13/50297-0, 03/10335-8, 11/50146-6)

BATISTA ROSA, AUGUSTO HENRIQUE; RIBEIRO LEITE, LUIS ANDERSON; RODRIGUES DA COSTA, RICARDO PEREIRA; LUCCI FREITAS, ANDRE VICTOR. A New Species of Dynamine Hubner, [1919] (Lepidoptera: Nymphalidae: Biblidinae) from the Atlantic Forest in Southeastern Brazil. Neotropical Entomology, v. 50, n. 6, JUL 2021. (13/50297-0, 11/50225-3)

FREITAS, A. V. L.; MUNIZ, D. G.; CARREIRA, J. Y. O.; OLIVEIRA, P. S.. FRUIT-FEEDING BUTTERFLY ASSEMBLAGES IN A NEOTROPICAL SAVANNA: ASSESSING PHENOLOGICAL PATTERNS USING BAITED TRAPS. JOURNAL OF THE LEPIDOPTERISTS' SOCIETY, v. 75, n. 2, p. 88-103, JUN 8 2021. (12/50260-6, 09/02451-4, 14/50316-7, 14/23141-1, 17/16645-1, 11/50225-3, 13/50297-0, 11/18580-8)

FREITAS, ANDRE V. L.; ROSA, AUGUSTO H. B.; BROWN, JR., KEITH S.; NOBRE, CARLOS E. B.; MELO, DOUGLAS H. A.; KERPEL, SOLANGE M.. A NEW AND RARE ITHOMIINI FROM NORTHEASTERN BRAZIL (LEPIDOPTERA: NYMPHALIDAE: DANAINAE). JOURNAL OF THE LEPIDOPTERISTS' SOCIETY, v. 75, n. 1, p. 44-48, MAR 24 2021. (13/50297-0, 11/50225-3)

FREITAS, A. V. L.; ROSA, A. H. B.; NOBRE, C. E. B.; MELO, D. H. A.; MOTA, L. L.; SILVA-BRANDAO, K. L.; MACHADO, P. A.; CARREIRA, J. Y. O.. Immature Stages, Natural History, Systematics and Conservation of an Endangered Neotropical Butterfly: the Case of Scada karschina delicata (Nymphalidae: Ithomiini). Neotropical Entomology, v. 49, n. 5, p. 685-695, OCT 2020. (11/50225-3, 13/50297-0)

GOMES, BEATRIZ M.; FONSECA, LUIZ HENRIQUE M.; LOHMANN, LUCIA G.; PROENCA, CAROLYN E. B.. Adenocalymma albiflorum(Bignonieae, Bignoniaceae), a new combination, notes on morphology and distribution. BRITTONIA, v. 72, n. 3, p. 317-323, SEP 2020. (11/50859-2, 12/50260-6, 13/50297-0)

MORAES, SIMEAO DE SOUZA; MURILLO-RAMOS, LEIDYS; MACHADO, PATRICIA A.; GHANAVI, HAMID R.; MAGALDI, LUIZA M.; SILVA-BRANDAO, KARINA L.; KATO, MASSUO J.; FREITAS, ANDRE V. L.; WAHLBERG, NIKLAS. A double-edged sword: Unrecognized cryptic diversity and taxonomic impediment in Eois (Lepidoptera, Geometridae). ZOOLOGICA SCRIPTA, v. 50, n. 5, p. 633-646, SEP 2021. (15/24663-4, 12/50260-6, 13/50297-0, 15/17047-5, 16/20196-5, 11/50225-3)

SCHULTZ, EDUARDO D.; PEREZ-EMAN, JORGE; ALEIXO, ALEXANDRE; MIYAKI, CRISTINA Y.; BRUMFIELD, ROBB T.; CRACRAFT, JOEL; RIBAS, CAMILA C.. Diversification history in the Dendrocincla fuliginosa complex (Aves: Dendrocolaptidae): Insights from broad geographic sampling. Molecular Phylogenetics and Evolution, v. 140, NOV 2019. (09/12989-1, 13/50297-0)

MASTRETTA-YANES, ALICIA; XUE, ALEXANDER T.; MORENO-LETELIER, ALEJANDRA; JORGENSEN, TOVE H.; ALVAREZ, NADIR; PINERO, DANIEL; EMERSON, BRENT C.. Long-term insitu persistence of biodiversity in tropical sky islands revealed by landscape genomics. Molecular Ecology, v. 27, n. 2, p. 432-448, JAN 2018. (13/50297-0)

TRUJILLO-ARIAS, NATALIA; DANTAS, GISELE P. M.; ARBELAEZ-CORTES, ENRIQUE; NAOKI, KAZUYA; GOMEZ, MARIA I.; SANTOS, FABRICIO R.; MIYAKI, CRISTINA Y.; ALEIXO, ALEXANDRE; TUBARO, PABLO L.; CABANNE, GUSTAVO S.. The niche and phylogeography of a passerine reveal the history of biological diversification between the Andean and the Atlantic forests. Molecular Phylogenetics and Evolution, v. 112, p. 107-121, JUL 2017. (13/50297-0)

PAZ, ANDREA; GUARNIZO, CARLOS E.. Environmental ranges estimated from species distribution models are not good predictors of lizard and frog physiological tolerances. EVOLUTIONARY ECOLOGY, v. 34, n. 1, NOV 2019. (13/50297-0)

PRATES, IVAN; PAZ, ANDREA; BROWN, JASON L.; CARNAVAL, ANA C.. Links between prey assemblages and poison frog toxins: A landscape ecology approach to assess how biotic interactions affect species phenotypes. ECOLOGY AND EVOLUTION, v. 9, n. 24, NOV 2019. (13/50297-0)

PRATES, IVAN; MELO-SAMPAIO, PAULO ROBERTO; DE QUEIROZ, KEVIN; CARNAVAL, ANA CAROLINA; RODRIGUES, MIGUEL TREFAUT; DRUMMOND, LEANDRO DE OLIVEIRA. Discovery of a new species of Anolis lizards from Brazil and its implications for the historical biogeography of montane Atlantic Forest endemics. Amphibia-Reptilia, v. 41, n. 1, p. 87-103, JAN 2020. (13/50297-0, 11/50146-6)

DAMRON, BRITTANY N.; PINTO-DA-ROCHA, RICARDO; LONGHORN, STUART J.. Description of a new species of Eucynorta (Opiliones, Cosmetidae) from Cortes, Honduras. Zootaxa, v. 4450, n. 1, p. 125-134, JUL 23 2018. (13/50297-0, 12/02969-6)

MELO, D. H. A.; FILGUEIRAS, B. K. C.; ISERHARD, C. A.; IANNUZZI, L.; FREITAS, A. V. L.; LEAL, I. R.. Effect of habitat loss and fragmentation on fruit-feeding butterflies in the Brazilian Atlantic Forest. CANADIAN JOURNAL OF ZOOLOGY, v. 97, n. 7, p. 588-596, JUL 2019. (11/50225-3, 13/50297-0)

NOGUEIRA, A. A.; BRAGAGNOLO, C.; DASILVA, M. B.; MARTINS, T. K.; LORENZO, E. P.; PERBICHE-NEVES, G.; PINTO-DA-ROCHA, R.. Historical signatures in the alpha and beta diversity patterns of Atlantic Forest harvestman communities (Arachnida: Opiliones). CANADIAN JOURNAL OF ZOOLOGY, v. 97, n. 7, p. 631-643, JUL 2019. (13/50297-0)

GU, FANG; CHIESSI, CRISTIANO M.; ZONNEVELD, KARIN A. F.; BEHLING, HERMANN. Shifts of the Brazil-Falklands/Malvinas Confluence in the western South Atlantic during the latest Pleistocene-Holocene inferred from dinoflagellate cysts. PALYNOLOGY, v. 43, n. 3, p. 483-493, JUL 3 2019. (12/17517-3, 13/50297-0)

RIBEIRO, TIAGO DA SILVA; BATALHA-FILHO, HENRIQUE; SILVEIRA, LUIS FABIO; MIYAKI, CRISTINA YUMI; MALDONADO-COELHO, MARCOS. Life history and ecology might explain incongruent population structure in two co-distributed montane bird species of the Atlantic Forest. Molecular Phylogenetics and Evolution, v. 153, DEC 2020. (11/05399-3, 13/50297-0)

LOURENCO, GISELLE M.; SOARES, GLORIA R.; SANTOS, TALITA P.; DATTILO, WESLEY; FREITAS, ANDRE V. L.; RIBEIRO, SERVIO P.. Equal but different: Natural ecotones are dissimilar to anthropic edges. PLoS One, v. 14, n. 3, MAR 4 2019. (11/50225-3, 13/50297-0)

BARROSO LIMA, NICHOLAS COSTA; RODRIGUES SOARES, ANDRE ELIAS; DE PAULA ALMEIDA, LUIZ GONZAGA; DA COSTA, IGOR RODRIGUES; SATO, FERNANDA MIDORI; SCHNEIDER, PATRICIA; ALEIXO, ALEXANDRE; SCHNEIDER, MARIA PAULA; SANTOS, FABRICIO R.; MELLO, V, CLAUDIO; et al. Comparative mitogenomic analyses of Amazona parrots and Psittaciformes. GENETICS AND MOLECULAR BIOLOGY, v. 41, n. 3, p. 593-604, JUL-SEP 2018. (13/50297-0)

DO AMARAL, FABIO RAPOSO; MACEDO, GABRIEL; MALDONADO-COELHO, MARCOS; PIACENTINI, VITOR DE Q.; KEUROGHLIAN, ALEXINE; BIONDO, CIBELE. Bluffing in the forest: Neotropical Neomorphus ground-cuckoos and peccaries in a possible case of acoustic mimicry. JOURNAL OF AVIAN BIOLOGY, v. 48, n. 11, p. 1471-1474, NOV 2017. (13/50297-0, 16/11439-1, 11/23155-4)

PYRCZ, T. W.; FREITAS, A. V. L.; BOYER, P.; DIAS, F. M. S.; DOLIBAINA, D. R.; BARBOSA, E. P.; MAGALDI, L. M.; MIELKE, O. H. H.; CASAGRANDE, M. M.; LORENC-BRUDECKA, J.. Uncovered Diversity of a Predominantly Andean Butterfly Clade in the Brazilian Atlantic Forest: a Revision of the Genus Praepedaliodes Forster (Lepidoptera: Nymphalidae, Satyrinae, Satyrini). Neotropical Entomology, v. 47, n. 2, p. 211-255, APR 2018. (13/50297-0, 11/50225-3, 16/15873-8)

PAZ, A.; SPANOS, Z.; BROWN, J. L.; LYRA, M.; HADDAD, C.; RODRIGUES, M.; CARNAVAL, A.. Phylogeography of Atlantic Forest glassfrogs (Vitreorana): when geography, climate dynamics and rivers matter. HEREDITY, v. 122, n. 5, p. 545-557, MAY 2019. (13/50297-0, 03/10335-8, 14/50342-8, 11/50146-6, 13/50741-7)

DE-SILVA, DONNA LISA; MOTA, LUISA L.; CHAZOT, NICOLAS; MALLARINO, RICARDO; SILVA-BRANDAO, KARINA L.; GOMEZ PINEREZ, LUZ MIRYAM; FREITAS, ANDRE V. L.; LAMAS, GERARDO; JORON, MATHIEU; MALLET, JAMES; et al. North Andean origin and diversification of the largest ithomiine butterfly genus. SCIENTIFIC REPORTS, v. 7, APR 7 2017. (12/50260-6, 11/50225-3, 13/50297-0)

HARA, MARCOS R.; BRAGAGNOLO, CIBELE; PINTO-DA-ROCHA, RICARDO. Revision of Thaumatocranaus Roewer, 1932, with description of two new species (Opiliones: Laniatores: Gonyleptoidea). Zootaxa, v. 4254, n. 4, p. 457-472, APR 19 2017. (13/50297-0, 12/02969-6)

RIVERA, DANIELLE; PRATES, IVAN; FIRNENO, JR., THOMAS J.; RODRIGUES, MIGUEL TREFAUT; CALDWELL, JANALEE P.; FUJITA, MATTHEW K.. hylogenomics, introgression, and demographic history of South American true toads (Rhinella. Molecular Ecology, v. 31, n. 3, DEC 2021. (13/50297-0, 12/15754-8, 03/10335-8, 17/08357-6, 11/50206-9, 11/50146-6)

VILLANUEVA-BONILLA, GERMAN ANTONIO; ARAUJO-DA-SILVA, LUIZ PAULO; VASCONCELLOS-NETO, JOAO; SILVA MOURA SOBCZAK, JULLYANA CRISTINA MAGALHAES; FONSECA, EMILY OLIVEIRA; DE SOUSA NOBREGA, FRANCISCO AGEU; PIRES, JOEDSON CASTRO; PAIVA ARRUDA, ITALO DIEGO; DASILVA, MARCIO BERNARDINO; SOBCZAK, JOBER FERNANDO. irst record of the interaction between the arthropod-pathogenic fungus Gibellula and a new species of harvestman Auranus (Stygnidae) narrowly endemic to the Brazilian rain fores. Zootaxa, v. 5071, n. 3, p. 403-414, NOV 24 2021. (13/50297-0)

CAMEJO AVILES, ADRIANA MERCEDES; LEDRU, MARIE-PIERRE; RICARDI-BRANCO, FRESIA; RODRIGUEZ-ZORRO, PAULA A.; FRANCISCHETTI GARCIA, RICARDO J.; PERDOMO, JERLIN FERNANDEZ. haracterization of a glacial neotropical rainforest from pollen and spore assemblages (Colonia, Sao Paulo, Brazil. GRANA, v. 61, n. 2, JAN 2022. (13/50297-0)

PORTO, TIAGO JORDAO; PINTO-DA-ROCHA, RICARDO; BERNARDO DA ROCHA, PEDRO LUIS. Regional distribution patterns can predict the local habitat specialization of arachnids in heterogeneous landscapes of the Atlantic Forest. DIVERSITY AND DISTRIBUTIONS, v. 24, n. 3, p. 375-386, MAR 2018. (13/50297-0, 12/02969-6)

GU, FANG; CHIESSI, CRISTIANO M.; ZONNEVELD, KARIN A. F.; BEHLING, HERMANN. Late Quaternary environmental dynamics inferred from marine sediment core GeoB6211-2 off southern Brazil. PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY, v. 496, p. 48-61, MAY 1 2018. (12/17517-3, 13/50297-0)

CAMACHO, AGUSTIN; RUSCH, TRAVIS; RAY, GRAHAM; TELEMECO, RORY S.; RODRIGUES, MIGUEL TREFAUT; ANGILLETTA, MICHAEL J.. Measuring behavioral thermal tolerance to address hot topics in ecology, evolution, and conservation. Journal of Thermal Biology, v. 73, p. 71-79, APR 2018. (12/15754-8, 13/50297-0, 15/01300-3)

TRUJILLO-ARIAS, NATALIA; CALDERON, LUCIANO; SANTOS, FABRICIO R.; MIYAKI, CRISTINA Y.; ALEIXO, ALEXANDRE; WITT, CHRISTOPHER C.; TUBARO, PABLO L.; CABANNE, GUSTAVO S.. Forest corridors between the central Andes and the southern Atlantic Forest enabled dispersal and peripatric diversification without niche divergence in a passerine. Molecular Phylogenetics and Evolution, v. 128, p. 221-232, NOV 2018. (13/50297-0)

THOM, GREGORY; XUE, ALEXANDER T.; SAWAKUCHI, ANDRE O.; RIBAS, CAMILA C.; HICKERSON, MICHAEL J.; ALEIXO, ALEXANDRE; MIYAKI, CRISTINA. Quaternary climate changes as speciation drivers in the Amazon floodplains. SCIENCE ADVANCES, v. 6, n. 11, MAR 2020. (13/50297-0, 17/25720-7, 14/00113-2, 18/17869-3, 12/50260-6, 15/12551-7)

CASSINO, RAQUEL FRANCO; LEDRU, MARIE-PIERRE; SANTOS, RUDNEY DE ALMEIDA; FAVIER, CHARLY. Vegetation and fire variability in the central Cerrados (Brazil) during the Pleistocene-Holocene transition was influenced by oscillations in the SASM boundary belt. QUATERNARY SCIENCE REVIEWS, v. 232, MAR 15 2020. (13/50297-0)

ORRICO, VICTOR G. D.; NUNES, IVAN; MATTEDI, CAMILA; FOUQUET, ANTOINE; LEMOS, ARTHUR W.; RIVERA-CORREA, MAURICIO; LYRA, MARIANA L.; LOEBMANN, DANIEL; PIMENTA, BRUNO V. S.; CARAMASCHI, ULISSES; et al. Integrative taxonomy supports the existence of two distinct species within Hypsiboas crepitans (Anura: Hylidae). SALAMANDRA, v. 53, n. 1, p. 99-113, FEB 15 2017. (13/50297-0, 13/50741-7)

FOUQUET, ANTOINE; MARINHO, PEDRO; REJAUD, ALEXANDRE; CARVALHO, THIAGO R.; CAMINER, MARCEL A.; JANSEN, MARTIN; RAINHA, RAISSA N.; RODRIGUES, MIGUEL T.; WERNECK, FERNANDA P.; LIMA, ALBERTINA P.; et al. Systematics and biogeography of the Boana albopunctata species group (Anura, Hylidae), with the description of two new species from Amazonia. SYSTEMATICS AND BIODIVERSITY, v. 19, n. 4, p. 375-399, MAY 19 2021. (11/50146-6, 13/50741-7, 13/50297-0, 03/10335-8, 17/08489-0)

ACERO-MURCIA, ADRIANA CAROLINA; DO AMARAL, FABIO RAPOSO; DE BARROS, FABIO C.; RIBEIRO, TIAGO DA SILVA; MIYAKI, CRISTINA Y.; MALDONADO-COELHO, MARCOS. Ecological and evolutionary drivers of geographic variation in songs of a Neotropical suboscine bird: The Drab-breasted Bamboo Tyrant (Hemitriccus diops, Rhynchocyclidae). AUK, v. 138, n. 2, APR 6 2021. (15/18287-0, 13/50297-0, 11/50143-7, 11/23155-4, 16/11439-1)

SILVA-BRANDAO, KARINA L.; CIRINO, MARIANA; MAGALDI, LUIZA DE MORAES; GUERATTO, PATRICIA EYNG; MATTOS, RICARDO GABRIEL; FREITAS, ANDRE V. L.. ubspecies limits and hidden Wolbachia diversity in Actinote pellenea butterflie. SYSTEMATICS AND BIODIVERSITY, v. 19, n. 8, AUG 2021. (12/16266-7, 13/50297-0, 11/50225-3, 15/24663-4, 18/19171-3, 12/50260-6)

DO AMARAL, FABIO RAPOSO; THOM, GREGORY; LIMA-RIBEIRO, MATHEUS S.; ALVARADO-SERRANO, DIEGO F.; MONTESANTI, JULIA A. C.; PELLEGRINO, KATIA C. M.; MIYAKI, CRISTINA Y.; HICKERSON, MICHAEL J.; MALDONADO-COELHO, MARCOS. ugged relief and climate promote isolation and divergence between two neotropical cold-associated bird. Evolution, v. 75, n. 10, AUG 2021. (11/50143-7, 16/11439-1, 15/12551-7, 18/17869-3, 13/50297-0, 17/25720-7, 15/18287-0, 11/23155-4)

BATISTA ROSA, AUGUSTO HENRIQUE; MACHADO, PATRICIA AVELINO; SILVA-BRANDAO, KARINA LUCAS; DE SOUZA, MARCOS MAGALHAES; GOMES, PATRICIA PEREIRA; MARTINS, MARIANE PECZEK; LUCCI FREITAS, ANDRE VICTOR. NEW GEOGRAPHICAL RECORDS FOR THE CRITICALLY ENDANGERED BUTTERFLY PARIDES PANTHONUS CASTILHOI (PAPILIONIDAE: TROIDINI). JOURNAL OF THE LEPIDOPTERISTS' SOCIETY, v. 73, n. 4, p. 279-281, NOV 20 2019. (11/50225-3, 13/50297-0)

SHIRAI, L. T.; MACHADO, P. A.; MOTA, L. L.; ROSA, A. H. B.; FREITAS, A. V. L.. DNB, THE DATABASE OF NYMPHALIDS IN BRAZIL, WITH A CHECKLIST FOR STANDARDIZED SPECIES LISTS. JOURNAL OF THE LEPIDOPTERISTS' SOCIETY, v. 73, n. 2, p. 93-108, JUN 11 2019. (11/50225-3, 12/50260-6, 13/50297-0, 14/23504-7)

KOK, PHILIPPE J. R.; BITTENBINDER, MATYAS A.; VAN DEN BERG, JORIS K.; MARQUES-SOUZA, SERGIO; SALES NUNES, PEDRO M.; LAKING, ALEXANDRA E.; TEIXEIRA, MAURO, JR.; FOUQUET, ANTOINE; MEANS, D. BRUCE; MACCULLOCH, ROSS D.; et al. Integrative taxonomy of the gymnophthalmid lizard Neusticurus rudis Boulenger, 1900 identifies a new species in the eastern Pantepui region, north-eastern South America. Journal of Natural History, v. 52, n. 13-16, p. 38-pg., 2018-01-01. (11/50146-6, 12/10163-1, 13/50297-0)

FOUQUET, ANTOINE; REJAUD, ALEXANDRE; RODRIGUES, MIGUEL T.; RON, SANTIAGO R.; CHAPARRO, JUAN C.; OSORNO, MARIELA; WERNECK, FERNANDA P.; HRBEK, TOMAS; LIMA, ALBERTINA P.; CAMACHO-BADANI, TERESA; et al. Diversification of the Pristimantis conspicillatus group (Anura: Craugastoridae) within distinct neotropical areas throughout the Neogene. SYSTEMATICS AND BIODIVERSITY, v. 20, n. 1, p. 16-pg., 2022-12-31. (03/10335-8, 11/50146-6, 13/50297-0)

THOME, MARIA TEREZA C.; LYRA, MARIANA L.; LEMES, PRISCILA; TEIXEIRA, LARYSSA S.; CARNAVAL, ANA CAROLINA; HADDAD, CELIO F. B.; CANEDO, CLARISSA. Outstanding diversity and microendemism in a clade of rare Atlantic Forest montane frogs. Molecular Phylogenetics and Evolution, v. 149, AUG 2020. (13/50297-0)

CRISTINA Y. MIYAKI; FRANCISCO W. CRUZ; MICHAEL HICKERSON; FABIÁN A. MICHELANGELI; RICARDO PINTO-DA-ROCHA; WAYT THOMAS; ANA CAROLINA CARNAVAL. Integrando disciplinas para a predição da biodiversidade da Floresta Atlântica no Brasil. Biota Neotropica, v. 22, 2022-06-27. (13/50297-0)

SIMON, QUENTIN; LEDRU, MARIE-PIERRE; SAWAKUCHI, ANDRE OLIVEIRA; FAVIER, CHARLY; MINELI, THAYS D.; GROHMANN, CARLOS H.; GUEDES, MARCO; BARE, EDOUARD; THOUVENY, NICOLAS; GARCIA, MARTA; et al. Chronostratigraphy of a 1.5 +/- 0.1 Ma composite sedimentary record from Colonia basin (SE Brazil): Bayesian modeling based on paleomagnetic, authigenic Be-10/Be-9, radiocarbon and luminescence dating. QUATERNARY GEOCHRONOLOGY, v. 58, JUN 2020. (13/50297-0)

SHIRAI, LEILA T.; BARBOSA, EDUARDO P.; GREVE, ROBERTO R.; MAGALDI, LUIZA M.; NASCIMENTO, ANDRE R.; FREITAS, ANDRE V. L.. Natural History of Selenophanes cassiope guarany (Lepidoptera: Nymphalidae: Brassolini): an Integrative Approach, From Molecules to Ecology. Annals of the Entomological Society of America, v. 110, n. 2, p. 145-159, MAR 2017. (13/50297-0, 15/17046-9, 11/50225-3, 15/24663-4, 12/03750-8, 12/50260-6, 14/23504-7)

DO AMARAL, FABIO RAPOSO; MALDONADO-COELHO, MARCOS; ALEIXO, ALEXANDRE; LUNA, LEILTON W.; DO REGO, PERICLES SENA; ARARIPE, JULIANA; SOUZA, THAINARA O.; SILVA, WEBER A. G.; THOM, GREGORY. Recent chapters of Neotropical history overlooked in phylogeography: Shallow divergence explains phenotype and genotype uncoupling in Antilophia manakins. Molecular Ecology, v. 27, n. 20, p. 4108-4120, OCT 2018. (13/50297-0, 17/25720-7, 14/00113-2, 15/18287-0, 15/12551-7, 16/11439-1, 11/23155-4, 11/50143-7)

BOUIMETARHAN, ILHAM; CHIESSI, CRISTIANO M.; GONZALEZ-ARANGO, CATALINA; DUPONT, LYDIE; VOIGT, INES; PRANGE, MATTHIAS; ZONNEVELD, KARIN. Intermittent development of forest corridors in northeastern Brazil during the last deglaciation: Climatic and ecologic evidence. QUATERNARY SCIENCE REVIEWS, v. 192, p. 86-96, JUL 15 2018. (13/50297-0)

ZENKER, MAURICIO M.; WAHLBERG, NIKLAS; BREHM, GUNNAR; TESTON, JOSE A.; PRZYBYLOWICZ, LUKASZ; PIE, MARCIO R.; FREITAS, ANDRE V. L.. Systematics and origin of moths in the subfamily Arctiinae (Lepidoptera, Erebidae) in the Neotropical region. ZOOLOGICA SCRIPTA, v. 46, n. 3, p. 348-362, MAY 2017. (13/50297-0, 14/06646-2, 11/50225-3, 13/09647-7, 12/50260-6)

ANDRÉ VICTOR LUCCI FREITAS; EDUARDO PROENÇA BARBOSA; KEITH RICHARD WILLMOTT; NIKLAS WAHLBERG; GERARDO LAMAS. 'Species' from two different butterfly genera combined into one: description of a new genus of Euptychiina (Nymphalidae: Satyrinae) with unusually variable wing pattern. Revista Brasileira de Entomologia, v. 60, n. 2, p. 157-165, 2016-06-00. (12/50260-6, 12/03750-8, 11/50225-3, 13/50297-0)

GUERATTO, CAIO; MENDES, AMANDA CRUZ; PINTO-DA-ROCHA, RICARDO. Description of two new species of Magnispina and a new hypothesis of phylogenetic relationships for Heteropachylinae (Opiliones: Laniatores: Gonyleptidae). Zootaxa, v. 4300, n. 2, p. 180-194, AUG 2 2017. (13/50297-0, 15/10415-9)

PRATES, IVAN; RIVERA, DANIELLE; RODRIGUES, MIGUEL T.; CARNAVAL, ANA C.. A mid-Pleistocene rainforest corridor enabled synchronous invasions of the Atlantic Forest by Amazonian anole lizards. Molecular Ecology, v. 25, n. 20, p. 5174-5186, OCT 2016. (13/50297-0, 03/10335-8, 11/50146-6)

PRATES, IVAN; HERNANDEZ, LEYLA; SAMELO, RICARDO R.; CARNAVAL, ANA C.. Molecular Identification and Geographic Origin of an Exotic Anole Lizard Introduced to Brazil, with Remarks on Its Natural History. South American Journal of Herpetology, v. 11, n. 3, p. 220-227, DEC 2016. (13/50297-0)

CHAZOT, NICOLAS; DE-SILVA, DONNA LISA; WILLMOTT, KEITH R.; FREITAS, ANDRE V. L.; LAMAS, GERARDO; MALLET, JAMES; GIRALDO, CARLOS E.; URIBE, SANDRA; ELIAS, MARIANNE. Contrasting patterns of Andean diversification among three diverse clades of Neotropical clearwing butterflies. ECOLOGY AND EVOLUTION, v. 8, n. 8, p. 3965-3982, APR 2018. (13/50297-0, 11/50225-3, 12/50260-6)

TOURINHO, ANA LUCIA; DIAS, SIDCLAY C.; LO-MAN-HUNG, NANCY F.; PINTO-DA-ROCHA, RICARDO; BONALDO, ALEXANDRE B.; BACCARO, FABRICIO B.. Optimizing survey methods for spiders and harvestmen assemblages in an Amazonian upland forest. PEDOBIOLOGIA, v. 67, p. 35-44, MAR 2018. (13/50297-0)

VILLARREAL, OSVALDO M.; KURY, ADRIANO B.; PINTO-DA-ROCHA, RICARDO. The poorly known genus Ventrifurca Roewer, 1913 revisited (Opiliones: Cranaidae). ZOOLOGICAL STUDIES, v. 54, JUN 2015. (13/50297-0, 09/17206-5)

FIRETTI-LEGGIERI, FABIANA; DEMARCO, DIEGO; LOHMANN, LUCIA G.. A new species of Anemopaegma (Bignonieae, Bignoniaceae) from the Atlantic Forest of Brazil. PHYTOTAXA, v. 219, n. 2, p. 174-182, JUL 8 2015. (13/50297-0, 11/50859-2, 12/50260-6)

MELO PACHECO DE MEDEIROS, MARIA CLAUDIA; GUISAN, ANTOINE; LOHMANN, LUCIA G.. Climate niche conservatism does not explain restricted distribution patterns in Tynanthus (Bignonieae, Bignoniaceae). Botanical Journal of the Linnean Society, v. 179, n. 1, p. 95-109, SEP 2015. (13/50297-0, 10/51579-0, 11/50859-2, 12/50260-6)

TOURINHO, ANA LUCIA; PINTO-DA-ROCHA, RICARDO; BRAGAGNOLO, CIBELE. Taxonomic notes on Holcobunus Roewer, 1910, with descriptions of three new species, and new records for Holcobunus nigripalpis Roewer, 1910 (Opiliones: Eupnoi: Sclerosomatidae). Zootaxa, v. 4027, n. 3, p. 425-436, OCT 5 2015. (13/50297-0)

CABANNE, GUSTAVO S.; TRUJILLO-ARIAS, NATALIA; CALDERON, LUCIANO; D'HORTA, FERNANDO M.; MIYAKI, CRISTINA Y.. Phenotypic evolution of an Atlantic Forest passerine (Xiphorhynchus fuscus): biogeographic and systematic implications. Biological Journal of the Linnean Society, v. 113, n. 4, p. 1047-1066, DEC 2014. (13/50297-0, 09/12989-1)

RODRIGUES, MIGUEL TREFAUT; VINA BERTOLOTTO, CAROLINA ELENA; AMARO, RENATA CECILIA; YONENAGA-YASSUDA, YATIYO; XAVIER FREIRE, ELIZA MARIA; MACHADO PELLEGRINO, KATIA CRISTINA. Molecular phylogeny, species limits, and biogeography of the Brazilian endemic lizard genus Enyalius (Squamata: Leiosauridae): An example of the historical relationship between Atlantic Forests and Amazonia. Molecular Phylogenetics and Evolution, v. 81, p. 137-146, DEC 2014. (13/50297-0, 03/10335-8, 11/50146-6)

BROWN, JASON L.. SDMtoolbox: a python-based GIS toolkit for landscape genetic, biogeographic and species distribution model analyses. METHODS IN ECOLOGY AND EVOLUTION, v. 5, n. 7, p. 694-700, JUL 2014. (13/50297-0)

CARNAVAL, ANA CAROLINA; WALTARI, ERIC; RODRIGUES, MIGUEL T.; ROSAUER, DAN; VANDERWAL, JEREMY; DAMASCENO, ROBERTA; PRATES, IVAN; STRANGAS, MARIA; SPANOS, ZOE; RIVERA, DANIELLE; et al. Prediction of phylogeographic endemism in an environmentally complex biome. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, v. 281, n. 1792, OCT 7 2014. (13/50297-0, 11/50146-6, 03/10335-8, 13/22477-3)

PINTO-DA-ROCHA, RICARDO; BRAGAGNOLO, CIBELE; TOURINHO, ANA LUCIA. Three new species of Thrasychiroides Soares & Soares, 1947 from Brazilian Mountains (Opiliones, Eupnoi, Neopilionidae). Zootaxa, v. 3869, n. 4, p. 469-482, OCT 2 2014. (13/50297-0, 09/17206-5, 12/02969-6)

BATALHA-FILHO, HENRIQUE; PESSOA, RODRIGO O.; FABRE, PIERRE-HENRI; FJELDSA, JON; IRESTEDT, MARTIN; ERICSON, PER G. P.; SILVEIRA, LUIS F.; MIYAKI, CRISTINA Y.. Phylogeny and historical biogeography of gnateaters (Passeriformes, Conopophagidae) in the South America forests. Molecular Phylogenetics and Evolution, v. 79, p. 422-432, OCT 2014. (13/50297-0, 09/12989-1)

BRAGAGNOLO, CIBELE; PINTO-DA-ROCHA, RICARDO; ANTUNES, JR., MANUEL; CLOUSE, RONALD M.. Phylogenetics and phylogeography of a long-legged harvestman (Arachnida:Opiliones) in the Brazilian Atlantic Rain Forest reveals poor dispersal, low diversity and extensive mitochondrial introgression. INVERTEBRATE SYSTEMATICS, v. 29, n. 4, p. 386-404, 2015. (13/50297-0, 09/17206-5)

OVERCAST, ISAAC; BAGLEY, JUSTIN C.; HICKERSON, MICHAEL J.. Strategies for improving approximate Bayesian computation tests for synchronous diversification. BMC Evolutionary Biology, v. 17, AUG 24 2017. (13/50297-0)

MARIN, MARIO A.; PENA, CARLOS; URIBE, SANDRA I.; FREITAS, ANDRE V. L.. Morphology agrees with molecular data: phylogenetic affinities of Euptychiina butterflies (Nymphalidae: Satyrinae). Systematic Entomology, v. 42, n. 4, p. 768-785, OCT 2017. (13/50297-0, 11/50225-3, 12/50260-6, 14/16481-0)

FONSECA, LUIZ HENRIQUE M.; LOHMANN, LUCIA G.. Adenocalymma cauliflorum (Bignonieae, Bignoniaceae), a New Cauliflorous Species from the Atlantic Forest of Eastern Brazil. SYSTEMATIC BOTANY, v. 42, n. 3, p. 584-589, JUL-SEP 2017. (13/50297-0, 11/50859-2, 12/50260-6)

GOICOECHEA, NOEMI; FROST, DARREL R.; DE LA RIVA, IGNACIO; PELLEGRINO, KATIA C. M.; SITES, JR., JACK; RODRIGUES, MIGUEL T.; PADIAL, JOSE M.. Molecular systematics of teioid lizards (Teioidea/Gymnophthalmoidea: Squamata) based on the analysis of 48 loci under tree-alignment and similarity-alignment. CLADISTICS, v. 32, n. 6, p. 624-671, DEC 2016. (13/50297-0, 03/10335-8, 11/50146-6)

HARVEY, MARK S.; ANDRADE, RENATA; PINTO-DA-ROCHA, RICARDO. The first New World species of the pseudoscorpion family Feaellidae (Pseudoscorpiones: Feaelloidea) from the Brazilian Atlantic Forest. JOURNAL OF ARACHNOLOGY, v. 44, n. 2, p. 227-234, AUG 2016. (13/50297-0, 12/02969-6)

JOSEPH, T. A.; HICKERSON, M. J.; ALVARADO-SERRANO, D. F.. Demographic inference under a spatially continuous coalescent model. HEREDITY, v. 117, n. 2, p. 94-99, AUG 2016. (13/50297-0)

FONSECA, LUIZ HENRIQUE M.; ZUNTINI, ALEXANDRE R.; LOHMANN, LUCIA G.. Two new species of Adenocalymma (Bignonieae, Bignoniaceae) from the Atlantic Forest of Brazil. PHYTOTAXA, v. 284, n. 4, p. 263-272, NOV 18 2016. (13/50297-0, 11/50859-2, 12/50260-6)

MAESTRI, RENAN; FORNEL, RODRIGO; ALVES, GISLENE LOPES GONC; GEISE, LENA; OCHOTORENA DE FREITAS, THALES RENATO; CARNAVAL, ANA CAROLINA. Predictors of intraspecific morphological variability in a tropical hotspot: comparing the influence of random and non-random factors. Journal of Biogeography, v. 43, n. 11, p. 2160-2172, NOV 2016. (13/50297-0)

CHAZOT, NICOLAS; WILLMOTT, KEITH R.; CONDAMINE, FABIEN L.; DE-SILVA, DONNA LISA; FREITAS, ANDRE V. L.; LAMAS, GERARDO; MORLON, HELENE; GIRALDO, CARLOS E.; JIGGINS, CHRIS D.; JORON, MATHIEU; et al. Into the Andes: multiple independent colonizations drive montane diversity in the Neotropical clearwing butterflies Godyridina. Molecular Ecology, v. 25, n. 22, p. 5765-5784, NOV 2016. (13/50297-0, 11/50225-3, 12/50260-6)

KAMINSKI, LUCAS A.; ISERHARD, CRISTIANO A.; FREITAS, ANDRE V. L.. Thisbe silvestre sp nov (Lepidoptera: Riodinidae): a new myrmecophilous butterfly from the Brazilian Atlantic Forest. AUSTRAL ENTOMOLOGY, v. 55, n. 2, p. 138-146, MAY 2016. (10/51340-8, 11/08433-8, 11/50225-3, 13/50297-0)

XUE, ALEXANDER T.; HICKERSON, MICHAEL J.. The aggregate site frequency spectrum for comparative population genomic inference. Molecular Ecology, v. 24, n. 24, p. 6223-6240, DEC 2015. (13/50297-0)

BROWN, JASON L.; WEBER, JENNIFER J.; ALVARADO-SERRANO, DIEGO F.; HICKERSON, MICHAEL J.; FRANKS, STEVEN J.; CARNAVAL, ANA C.. Predicting the genetic consequences of future climate change: The power of coupling spatial demography, the coalescent, and historical landscape changes. AMERICAN JOURNAL OF BOTANY, v. 103, n. 1, p. 153-163, JAN 2016. (13/50297-0)

GROHMANN, CARLOS H.. Effects of spatial resolution on slope and aspect derivation for regional-scale analysis. Computers & Geosciences, v. 77, p. 111-117, APR 2015. (09/17675-5, 13/50297-0, 12/50260-6)

LEITE, DALILA ALVES; KEUROGHLIAN, ALEXINE; RUFO, DANILO AQUEU; MIYAKI, CRISTINA YUMI; BIONDO, CIBELE. Genetic evidence of promiscuity in a mammal without apparent sexual dimorphism, the white-lipped peccary (Tayassu pecari). Mammalian Biology, v. 92, p. 111-114, SEP 2018. (13/50297-0, 09/12989-1)

MALDONADO-COELHO, MARCOS; MARINI, MIGUEL ANGELO; DO AMARAL, FABIO RAPOSO; RIBON, ROMULO. The invasive species rules: competitive exclusion in forest avian mixed-species flocks in a fragmented landscape. REVISTA BRASILEIRA DE ORNITOLOGIA, v. 25, n. 1, p. 54-59, MAR 2017. (11/50143-7, 13/50297-0, 10/05445-2, 15/18287-0, 11/23155-4)

LEDRU, MARIE-PIERRE; MONTADE, VINCENT; BLANCHARD, GREGOIRE; HELY, CHRISTELLE. Long-term Spatial Changes in the Distribution of the Brazilian Atlantic Forest. Biotropica, v. 48, n. 2, p. 159-169, MAR 2016. (13/50297-0)

CABANNE, GUSTAVO S.; CAMPAGNA, LEONARDO; TRUJILLO-ARIAS, NATALIA; NAOKI, KAZUYA; GOMEZ, ISABEL; MIYAKI, CRISTINA Y.; SANTOS, FABRICIO R.; DANTAS, GISELLE P. M.; ALEIXO, ALEXANDRE; CLARAMUNT, SANTIAGO; et al. Phylogeographic variation within the Buff-browed Foliage-gleaner (Aves: Furnariidae: Syndactyla rufosuperciliata) supports an Andean-Atlantic forests connection via the Cerrado. Molecular Phylogenetics and Evolution, v. 133, p. 198-213, APR 2019. (13/50297-0)

RODRIGUEZ-ZORRO, PAULA A.; LEDRU, MARIE-PIERRE; BARD, EDOUARD; AQUINO-ALFONSO, OLGA; CAMEJO, ADRIANA; DANIAU, ANNE-LAURE; FAVIER, CHARLY; GARCIA, MARTA; MINELI, THAYS D.; ROSTEK, FRAUKE; et al. Shut down of the South American summer monsoon during the penultimate glacial. SCIENTIFIC REPORTS, v. 10, n. 1, APR 15 2020. (13/50297-0)

BARBOSA, EDUARDO P.; SERAPHIM, NOEMY; VALENCIA, GORKY; AZEREDO-ESPIN, ANA MARIA L.; FREITAS, ANDRE V. L.. Phylogenetic systematics of Yphthimoides Forster, 1964 and related taxa, with notes on the biogeographical history of Yphthimoides species. Molecular Phylogenetics and Evolution, v. 168, p. 22-pg., 2022-03-01. (11/50225-3, 16/15873-8, 18/21432-0, 12/50260-6, 13/50297-0, 12/03750-8)

FOUQUET, ANTOINE; CORNUAULT, JOSSELIN; RODRIGUES, MIGUEL T.; WERNECK, FERNANDA P.; HRBEK, TOMAS; ACOSTA-GALVIS, ANDRES R.; MASSEMIN, DAVID; KOK, PHILIPPE J. R.; ERNST, RAFFAEL. Diversity, biogeography, and reproductive evolution in the genus Pipa (Amphibia: Anura: Pipidae). Molecular Phylogenetics and Evolution, v. 170, p. 15-pg., 2022-05-01. (03/10335-8, 11/50146-6, 13/50297-0)

MELO, DOUGLAS H. A.; FREITAS, ANDRE V. L.; TABARELLI, MARCELO; FILGUEIRAS, BRUNO K. C.; LEAL, INARA R.. Aridity and chronic anthropogenic disturbance as organizing forces of fruit-feeding butterfly assemblages in a Caatinga dry forest. Biotropica, v. 55, n. 1, p. 12-pg., 2022-11-09. (13/50297-0, 11/50225-3)

ROSA, AUGUSTO H. B.; SERAPHIM, NOEMY; MACHADO, PATRICIA A.; GUERATTO, PATRICIA E.; SOBRAL-SOUZA, THADEU; FREITAS, ANDRE V. L.. Eucorna sanarita (Schaus) (Riodinidae: Riodininae): Distribution, systematic position, and conservation of a threatened brazilian butterfly in the Atlantic Forest biodiversity hotspot. JOURNAL OF INSECT CONSERVATION, v. 27, n. 1, p. 13-pg., 2022-11-09. (18/19171-3, 13/50297-0, 21/03868-8)

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THOM, GREGORY; GEHARA, MARCELO; SMITH, BRIAN TILSTON; MIYAKI, CRISTINA Y.; DO AMARAL, FABIO RAPOSO. Microevolutionary dynamics show tropical valleys are deeper for montane birds of the Atlantic Forest. NATURE COMMUNICATIONS, v. 12, n. 1, NOV 1 2021. (11/50143-7, 17/25720-7, 18/03428-5, 13/50297-0, 11/23155-4, 18/17869-3)

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PESSOA-SILVA, MARILIA; HARA, MARCOS RYOTARO; PINTO-DA-ROCHA, RICARDO. Revision of the southern Andean genus Sadocus Sorensen, 1886 (Opiliones, Gonyleptidae, Pachylinae). ZOOKEYS, v. N/A, n. 1025, p. 47-pg., 2021-03-22. (18/07193-2, 13/50297-0)

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