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Modeling of the spatiotemporal dispersion of emergent arboviruses using heterogeneous data sources in the State of São Paulo

Grant number: 19/12000-1
Support Opportunities:Scholarships in Brazil - Post-Doctoral
Effective date (Start): July 01, 2019
Effective date (End): June 30, 2022
Field of knowledge:Health Sciences - Medicine - Medical Clinics
Acordo de Cooperação: MRC, UKRI ; Newton Fund, with FAPESP as a partner institution in Brazil
Principal Investigator:Ester Cerdeira Sabino
Grantee:Jaqueline Goes de Jesus
Host Institution: Faculdade de Medicina (FM). Universidade de São Paulo (USP). São Paulo , SP, Brazil
Associated research grant:18/14389-0 - Brazil-UK Centre for Arbovirus Discovery, Diagnosis, Genomics and Epidemiology (CADDE), AP.TEM
Associated scholarship(s):20/13395-7 - Genomic epidemiology of emerging arbovirus using heterogeneous data sources in the state of São Paulo, BE.EP.PD


The present work intends to analyze transmission patterns of emerging sylvatic arbovirus diseases (Yellow Fever, YFV, West Nile Virus, WNV, Saint Louis Encephalities, SLEV, among others), simultaneously analysing different available sources of information such as genome sequences, human density and movements and vector/vertebrate hosts natural history. The aim is to conciliate genetic information, cartographic and mathematical epidemiology, and natural history of vector and vertebrate hosts in order to produce an analytical framework that simultaneously analyses different data sources with pathogen genomes in order to recostruct transmission events through time and space, clarifying the occurrence and distribution of these viruses.

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Scientific publications (5)
(References retrieved automatically from Web of Science and SciELO through information on FAPESP grants and their corresponding numbers as mentioned in the publications by the authors)
THAÍS DE MOURA COLETTI; CAMILA MALTA ROMANO; PAULO ROBERTO URBINATTI; RENILDO SOUZA TEIXEIRA; LEILA WEISS DE ALMEIDA PEDROSA; MARCELLO SCHIAVO NARDI; DELSIO NATAL; ANTÔNIO CHARLYS DA COSTA; JAQUELINE GOES DE JESUS; INGRA MORALES CLARO; et al. Characterization of insect-specific Culex flavivirus (Flaviviridae) nucleotide sequences in mosquitoes from urban parks in São Paulo, Brazil. Revista da Sociedade Brasileira de Medicina Tropical, v. 55, . (10/51230-8, 19/03859-9, 16/18204-0, 18/17176-8, 18/14389-0, 19/12000-1, 17/00021-9)
CANDIDO, DARLAN S.; CLARO, INGRA M.; DE JESUS, JAQUELINE G.; SOUZA, WILLIAM M.; MOREIRA, FILIPE R. R.; DELLICOUR, SIMON; MELLAN, THOMAS A.; DU PLESSIS, LOUIS; PEREIRA, RAFAEL H. M.; SALES, FLAVIA C. S.; et al. Evolution and epidemic spread of SARS-CoV-2 in Brazil. Science, v. 369, n. 6508, SI, p. 1255+, . (20/04558-0, 16/00194-8, 19/21301-5, 18/14389-0, 18/14933-2, 17/13981-0, 20/04836-0, 18/25468-9, 16/18445-7, 18/09383-3, 18/17176-8, 19/12000-1, 19/07544-2, 19/24251-9)
IANI, FELIPE C. M.; GIOVANETTI, MARTA; FONSECA, VAGNER; SOUZA, WILLIAM M.; ADELINO, TALITA E. R.; XAVIER, JOILSON; JESUS, JAQUELINE G.; PEREIRA, MAIRA A.; SILVA, MARCOS V. F.; COSTA, ALANA V. B.; et al. Epidemiology and evolution of Zika virus in Minas Gerais, Southeast Brazil. INFECTION GENETICS AND EVOLUTION, v. 91, . (18/14389-0, 17/13981-0, 18/17176-8, 19/12000-1, 19/24251-9)
FARIA, NUNO R.; MELLAN, THOMAS A.; WHITTAKER, CHARLES; CLARO, INGRA M.; CANDIDO, DARLAN DA S.; MISHRA, SWAPNIL; CRISPIM, MYUKI A. E.; SALES, FLAVIA C.; HAWRYLUK, IWONA; MCCRONE, JOHN T.; et al. Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil. Science, v. 372, n. 6544, p. 815+, . (20/04558-0, 19/21568-1, 19/21301-5, 18/14389-0, 17/13981-0, 20/04272-9, 18/25468-9, 16/18445-7, 19/21858-0, 18/17176-8, 19/12000-1, 19/07544-2, 18/12579-7, 19/24251-9)
FERREIRA, GIULIA MAGALHAES; CLARO, INGRA MORALES; GROSCHE, VICTORIA RIQUENA; CANDIDO, DARLAN; JOSE, DIEGO PANDELO; ROCHA, ESMENIA COELHO; COLETTI, THAIS DE MOURA; MANULI, ERIKA REGINA; GABURO JR, NELSON; FARIA, NUNO RODRIGUES; et al. Molecular characterization and sequecing analysis of SARS-CoV-2 genome in Minas Gerais, Brazil. BIOLOGICALS, v. 80, p. 10-pg., . (18/17176-8, 18/14389-0, 19/12000-1)

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