Publicações científicas
(99)
(Referências obtidas automaticamente do Web of Science e do SciELO, por meio da informação sobre o financiamento pela FAPESP e o número do processo correspondente, incluída na publicação pelos autores)
OUELLETTE, JULIE;
TOUSSAY, XAVIER;
COMIN, CESAR H.;
COSTA, LUCIANO DA F.;
HO, MIRABELLE;
LACALLE-AURIOLES, MARIA;
FREITAS-ANDRADE, MOISES;
LIU, QING YAN;
LECLERC, SONIA;
PAN, YOULIAN;
LIU, ZIYING;
THIBODEAU, JEAN-FRANCOIS;
YIN, MELISSA;
CARRIER, MICAEL;
MORSE, CAMERON J.;
VAN DYKEN, PETER;
BERGIN, CHRISTOPHER J.;
BAILLET, SYLVAIN;
KENNEDY, CHRISTOPHER R.;
TREMBLAY, MARIE-EVE;
BENOIT, YANNICK D.;
STANFORD, WILLIAM L.;
BURGER, DYLAN;
STEWART, DUNCAN J.;
LACOSTE, BAPTISTE.
Vascular contributions to 16p11.2 deletion autism syndrome modeled in mice.
NATURE NEUROSCIENCE,
v. 23,
n. 9
JUL 2020.
Citações Web of Science: 0.
SOUZA, GLAUCIA MENDES;
VAN SLUYS, MARIE-ANNE;
LEMBKE, CAROLINA GIMILIANI;
LEE, HAYAN;
MARGARIDO, GABRIEL RODRIGUES ALVES;
HOTTA, CARLOS TAKESHI;
GAIARSA, JONAS WEISSMANN;
DINIZ, AUGUSTO LIMA;
OLIVEIRA, MAURO DE MEDEIROS;
FERREIRA, SAVIO DE SIQUEIRA;
NISHIYAMA, MILTON YUTAKA;
TEN-CATEN, FELIPE;
RAGAGNIN, GEOVANI TOLFO;
ANDRADE, PABLO DE MORAIS;
DE SOUZA, ROBSON FRANCISCO;
NICASTRO, GIANLUCCA GONCALVES;
PANDYA, RAVI;
KIM, CHANGSOO;
GUO, HUI;
DURHAM, ALAN MITCHELL;
CARNEIRO, MONALISA SAMPAIO;
ZHANG, JISEN;
ZHANG, XINGTAN;
ZHANG, QING;
MING, RAY;
SCHATZ, MICHAEL C.;
DAVIDSON, BOB;
PATERSON, ANDREW H.;
HECKERMAN, DAVID.
Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop.
GIGASCIENCE,
v. 8,
n. 12
DEC 2019.
Citações Web of Science: 3.
SILVA, FILIPI N.;
COMIN, CESAR H.;
COSTA, LUCIANO DA F.
Malleability of complex networks.
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT,
AUG 2019.
Citações Web of Science: 0.
BANDO, SILVIA Y.;
IAMASHITA, PRISCILA;
SILVA, FILIPI N.;
COSTA, LUCIANO DA F.;
ABE, CECILIA M.;
BERTONHA, FERNANDA B.;
GUTH, BEATRIZ E. C.;
FUJITA, ANDRE;
MOREIRA-FILHO, CARLOS A.
Dynamic Gene Network Analysis of Caco-2 Cell Response to Shiga Toxin-Producing Escherichia coli-Associated Hemolytic-Uremic Syndrome.
MICROORGANISMS,
v. 7,
n. 7
JUL 2019.
Citações Web of Science: 0.
DE ARRUDA, HENRIQUE F.;
SILVA, FILIPI N.;
COMIN, CESAR H.;
AMANCIO, DIEGO R.;
COSTA, LUCIANO DA F.
Connecting network science and information theory.
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS,
v. 515,
p. 641-648,
FEB 1 2019.
Citações Web of Science: 0.
RODRIGUEZ, MAYRA Z.;
COMIN, CESAR H.;
CASANOVA, DALCIMAR;
BRUNO, ODEMIR M.;
AMANCIO, DIEGO R.;
COSTA, LUCIANO DA F.;
RODRIGUES, FRANCISCO A.
Clustering algorithms: A comparative approach.
PLoS One,
v. 14,
n. 1
JAN 15 2019.
Citações Web of Science: 8.
LIMA, WANIA REZENDE;
MARTINS, DAVID CORREA;
PARREIRA, KLEBER SIMONIO;
SCARPELLI, PEDRO;
DE MORAES, MIRIAM SANTOS;
TOPALIS, PANTELIS;
HASHIMOTO, RONALDO FUMIO;
GARCIA, CELIA R. S.
Genome-wide analysis of the human malaria parasite Plasmodium falciparum transcription factor PfNF-YB shows interaction with a CCAAT motif.
ONCOTARGET,
v. 8,
n. 69,
p. 113987-114001,
DEC 26 2017.
Citações Web of Science: 1.
BANDO, SILVIA YUMI;
IAMASHITA, PRISCILA;
GUTH, BEATRIZ E.;
DOS SANTOS, LUIS F.;
FUJITA, ANDRE;
ABE, CECILIA M.;
FERREIRA, LEANDRO R.;
MOREIRA-FILHO, CARLOS ALBERTO.
A hemolytic-uremic syndrome-associated strain O113:H21 Shiga toxin-producing Escherichia coli specifically expresses a transcriptional module containing dicA and is related to gene network dysregulation in Caco-2 cells.
PLoS One,
v. 12,
n. 12
DEC 18 2017.
Citações Web of Science: 2.
BURKE, PAULO E. P.;
COMIN, CESAR H.;
SILVA, FILIPI N.;
COSTA, LUCIANO DA F.
Biological network border detection.
INTEGRATIVE BIOLOGY,
v. 9,
n. 12,
p. 947-955,
DEC 2017.
Citações Web of Science: 1.
GOUVEIA, AYDEN;
SEEGOBIN, MATTHEW;
KANNANGARA, TIMAL S.;
HE, LING;
WONDISFORD, FREDRIC;
COMIN, CESAR H.;
COSTA, LUCIANO DA F.;
BEIQUE, JEAN-CLAUDE;
LAGACE, DIANE C.;
LACOSTE, BAPTISTE;
WANG, JING.
The aPKC-CBP Pathway Regulates Post-stroke Neurovascular Remodeling and Functional Recovery.
STEM CELL REPORTS,
v. 9,
n. 6,
p. 1735-1744,
DEC 2017.
Citações Web of Science: 9.
JACOMINI, RICARDO DE SOUZA;
MARTINS, JR., DAVID CORREA;
DA SILVA, FELIPE LENO;
REALI COSTA, ANNA HELENA.
GeNICE: A Novel Framework for Gene Network Inference by Clustering, Exhaustive Search, and Multivariate Analysis.
JOURNAL OF COMPUTATIONAL BIOLOGY,
v. 24,
n. 8,
p. 809-830,
AUG 2017.
Citações Web of Science: 0.
RODRIGUES, VALQUIRIA DA CRUZ;
COMIN, CESAR H.;
SOARES, JULIANA COATRINI;
SOARES, ANDREY COATRINI;
MELENDEZ, MATIAS ELISEO;
FREGNANI, JOSE HUMBERTO T. G.;
CARVALHO, ANDRE LOPES;
COSTA, LUCIANO DA F.;
OLIVEIRA, JR., OSVALDO N.
Analysis of Scanning Electron Microscopy Images To Investigate Adsorption Processes Responsible for Detection of Cancer Biomarkers.
ACS APPLIED MATERIALS & INTERFACES,
v. 9,
n. 7,
p. 5885-5890,
FEB 22 2017.
Citações Web of Science: 4.
KOSER, DAVID E.;
THOMPSON, AMELIA J.;
FOSTER, SARAH K.;
DWIVEDY, ASHA;
PILLAI, EVA K.;
SHERIDAN, GRAHAM K.;
SVOBODA, HANNO;
VIANA, MATHEUS;
COSTA, LUCIANO DA F.;
GUCK, JOCHEN;
HOLT, CHRISTINE E.;
FRANZE, KRISTIAN.
Mechanosensing is critical for axon growth in the developing brain.
NATURE NEUROSCIENCE,
v. 19,
n. 12,
p. 1592-1598,
DEC 2016.
Citações Web of Science: 93.
PERCIANO, T.;
TUPIN, F.;
HIRATA, JR., R.;
CESAR, JR., R. M.
A two-level Markov random field for road network extraction and its application with optical, SAR, and multitemporal data.
International Journal of Remote Sensing,
v. 37,
n. 16,
p. 3584-3610,
AUG 20 2016.
Citações Web of Science: 6.
FONSECA, MONIQUE T.;
RODRIGUES, ABNER C.;
CEZAR, LUANA C.;
FUJITA, ANDRE;
SORIANO, FRANCISCO G.;
STEINER, ALEXANDRE A.
Spontaneous hypothermia in human sepsis is a transient, self-limiting, and nonterminal response.
Journal of Applied Physiology,
v. 120,
n. 12,
p. 1394-1401,
JUN 15 2016.
Citações Web of Science: 10.
SILVA, FILIPI N.;
AMANCIO, DIEGO R.;
BARDOSOVA, MARIA;
COSTA, LUCIANO DA F.;
OLIVEIRA, JR., OSVALDO N.
Using network science and text analytics to produce surveys in a scientific topic.
Journal of Informetrics,
v. 10,
n. 2,
p. 487-502,
MAY 2016.
Citações Web of Science: 25.
SILVA, FILIPI N.;
COMIN, CESAR H.;
PERON, THOMAS K. D. M.;
RODRIGUES, FRANCISCO A.;
YE, CHENG;
WILSON, RICHARD C.;
HANCOCK, EDWIN R.;
COSTA, LUCIANO DA F.
Concentric network symmetry.
INFORMATION SCIENCES,
v. 333,
p. 61-80,
MAR 10 2016.
Citações Web of Science: 4.
MOREIRA-FILHO, CARLOS ALBERTO;
BANDO, SILVIA YUMI;
BERTONHA, FERNANDA BERNARDI;
SILVA, FILIPI NASCIMENTO;
COSTA, LUCIANO DA FONTOURA;
FERREIRA, LEANDRO RODRIGUES;
FURLANETTO, GLAUCIO;
CHACUR, PAULO;
NOGUEIRA ZERBINI, MARIA CLAUDIA;
CARNEIRO-SAMPAIO, MAGDA.
Modular transcriptional repertoire and MicroRNA target analyses characterize genomic dysregulation in the thymus of Down syndrome infants.
ONCOTARGET,
v. 7,
n. 7,
p. 7497-7533,
FEB 16 2016.
Citações Web of Science: 2.
AZEVEDO, HATYLAS;
RENESTO, PAULO GUILHERME;
CHINEN, ROGERIO;
NAKA, ERIKA;
CARVALHO DE MATOS, ANA CRISTINA;
CENEDEZE, MARCOS ANTONIO;
MOREIRA-FILHO, CARLOS ALBERTO;
SARAIVA CAMARA, NIELS OLSEN;
PACHECO-SILVA, ALVARO.
Intragraft transcriptional profiling of renal transplant patients with tubular dysfunction reveals mechanisms underlying graft injury and recovery.
HUMAN GENOMICS,
v. 10,
JAN 7 2016.
Citações Web of Science: 1.
MACEDO, MAYSA M. G.;
GUIMARAES, WELINGSON V. N.;
GALON, MICHELI Z.;
TAKIMURA, CELSO K.;
LEMOS, PEDRO A.;
GUTIERREZ, MARCO ANTONIO.
A bifurcation identifier for IV-OCT using orthogonal least squares and supervised machine learning.
Computerized Medical Imaging and Graphics,
v. 46,
n. 2, SI,
p. 237-248,
DEC 2015.
Citações Web of Science: 7.
MATUSZEWSKI, DAMIAN J.;
CESAR, JR., ROBERTO M.;
STRICKLER, J. RUDI;
BALDASSO, LUIS F.;
LOPES, RUBENS M.
Visual rhythm for particle analysis in sample-in-flow systems: Application for continuous plankton monitoring.
LIMNOLOGY AND OCEANOGRAPHY-METHODS,
v. 13,
n. 12,
p. 687-696,
DEC 2015.
Citações Web of Science: 1.
SWARNKAR, TRIPTI;
SIMOES, SERGIO NERY;
ANURA, ANJI;
BRENTANI, HELENA;
CHATTERJEE, JYOTIRMOY;
HASHIMOTO, RONALDO FUMIO;
MARTINS, DAVID CORREA;
MITRA, PABITRA.
Identifying dense subgraphs in protein-protein interaction network for gene selection from microarray data.
NETWORK MODELING AND ANALYSIS IN HEALTH INFORMATICS AND BIOINFORMATICS,
v. 4,
n. 1
DEC 2015.
Citações Web of Science: 1.
YE, CHENG;
COMIN, CESAR H.;
PERON, THOMAS K. D. M.;
SILVA, FILIPI N.;
RODRIGUES, FRANCISCO A.;
COSTA, LUCIANO DA F.;
TORSELLO, ANDREA;
HANCOCK, EDWIN R.
Thermodynamic characterization of networks using graph polynomials.
Physical Review E,
v. 92,
n. 3
SEP 25 2015.
Citações Web of Science: 9.
MIAZAKI, MAURO;
VIANA, MATHEUS P.;
YANG, ZHONG;
COMIN, CESAR H.;
WANG, YAMING;
COSTA, LUCIANO DA F.;
XU, XIAOYIN.
Automated high-content morphological analysis of muscle fiber histology.
COMPUTERS IN BIOLOGY AND MEDICINE,
v. 63,
p. 28-35,
AUG 1 2015.
Citações Web of Science: 5.
MOREIRA-FILHO, CARLOS ALBERTO;
BANDO, SILVIA YUMI;
BERTONHA, FERNANDA BERNARDI;
IAMASHITA, PRISCILA;
SILVA, FILIPI NASCIMENTO;
COSTA, LUCIANO DA FONTOURA;
SILVA, ALEXANDRE VALOTTA;
MARTINS CASTRO, LUIZ HENRIQUE;
WEN, HUNG-TZU.
Community Structure Analysis of Transcriptional Networks Reveals Distinct Molecular Pathways for Early- and Late-Onset Temporal Lobe Epilepsy with Childhood Febrile Seizures.
PLoS One,
v. 10,
n. 5
MAY 26 2015.
Citações Web of Science: 3.
DE ARRUDA, HENRIQUE FERRAZ;
COMIN, CESAR HENRIQUE;
MIAZAKI, MAURO;
VIANA, MATHEUS PALHARES;
COSTA, LUCIANO DA FONTOURA.
A framework for analyzing the relationship between gene expression and morphological, topological, and dynamical patterns in neuronal networks.
JOURNAL OF NEUROSCIENCE METHODS,
v. 245,
p. 1-14,
APR 30 2015.
Citações Web of Science: 3.
OZAHATA, MINA CINTHO;
SABINO, ESTER CERDEIRA;
DIAZ, RICARDO SOBHIE;
CESAR-, JR., ROBERTO M.;
FERREIRA, JOAO EDUARDO.
Data-intensive analysis of HIV mutations.
BMC Bioinformatics,
v. 16,
FEB 5 2015.
Citações Web of Science: 0.
EROGLU, DENIZ;
PERON, THOMAS K. D. M.;
MARWAN, NOBERT;
RODRIGUES, FRANCISCO A.;
COSTA, LUCIANO DA F.;
SEBEK, MICHAEL;
KISS, ISTVAN Z.;
KURTHS, JUERGEN.
Entropy of weighted recurrence plots.
Physical Review E,
v. 90,
n. 4
OCT 21 2014.
Citações Web of Science: 21.
LACOSTE, BAPTISTE;
COMIN, CESAR H.;
BEN-ZVI, AYAL;
KAESER, PASCAL S.;
XU, XIAOYIN;
COSTA, LUCIANO DA F.;
GU, CHENGHUA.
Sensory-Related Neural Activity Regulates the Structure of Vascular Networks in the Cerebral Cortex.
NEURON,
v. 83,
n. 5,
p. 1117-1130,
SEP 3 2014.
Citações Web of Science: 37.
AMANCIO, DIEGO RAPHAEL;
COMIN, CESAR HENRIQUE;
CASANOVA, DALCIMAR;
TRAVIESO, GONZALO;
BRUNO, ODEMIR MARTINEZ;
RODRIGUES, FRANCISCO APARECIDO;
COSTA, LUCIANO DA FONTOURA.
A Systematic Comparison of Supervised Classifiers.
PLoS One,
v. 9,
n. 4
APR 24 2014.
Citações Web of Science: 67.
COMIN, CESAR H.;
SANTOS, JOAO R.;
CORRADINI, DARIO;
MORRISON, WILL;
CURME, CHESTER;
ROSENE, DOUGLAS L.;
GABRIELLI, ANDREA;
COSTA, LUCIANO DA F.;
STANLEY, H. EUGENE.
Statistical physics approach to quantifying differences in myelinated nerve fibers.
SCIENTIFIC REPORTS,
v. 4,
MAR 28 2014.
Citações Web of Science: 0.
CRISTINO, A. S.;
WILLIAMS, S. M.;
HAWI, Z.;
AN, J-Y;
BELLGROVE, M. A.;
SCHWARTZ, C. E.;
COSTA, L. DA F.;
CLAUDIANOS, C.
Neurodevelopmental and neuropsychiatric disorders represent an interconnected molecular system.
MOLECULAR PSYCHIATRY,
v. 19,
n. 3,
p. 294-301,
MAR 2014.
Citações Web of Science: 85.
BANDO, SILVIA YUMI;
SILVA, FILIPI NASCIMENTO;
COSTA, LUCIANO DA FONTOURA;
SILVA, ALEXANDRE V.;
PIMENTEL-SILVA, LUCIANA R.;
CASTRO, LUIZ H. M.;
WEN, HUNG-TZU;
AMARO, JR., EDSON;
MOREIRA-FILHO, CARLOS ALBERTO.
Complex Network Analysis of CA3 Transcriptome Reveals Pathogenic and Compensatory Pathways in Refractory Temporal Lobe Epilepsy.
PLoS One,
v. 8,
n. 11
NOV 21 2013.
Citações Web of Science: 11.